DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015096 cel-miR-46* 176758 lis-1 gacaguuaucuGCCGAGAGAa | ||||||| ucuuguucuauCAGCUCUCUu 2 11 377 397 [ce6:III:13371144-13371164:-] 0.4777 142 7 -13.63 -0.4798 MIMAT0015097 cel-miR-47* 176758 lis-1 ugACAGUUAUCUGACGAGAGAa |||: || | ||||||| cuUGUU-CUA-UCAGCUCUCUu 2 21 378 397 [ce6:III:13371144-13371163:-] 0.4777 144 7 -14.32 -0.4798 MIMAT0000027 cel-miR-56* 176758 lis-1 auguuGGGUUUUACCUAGGCGGu :|: |||| ||||||| cccccUCUUAAAU-UAUCCGCCc 2 19 309 330 [ce6:III:13371211-13371232:-] 0.4777 152 7 -17.45 -1.0828 MIMAT0015102 cel-miR-60* 176758 lis-1 uaAAAUA-CCGUGAGAAG-GUCAa | ||| || |||||| |||| guUCUAUCAGCUCUCUUCUCAGUg 2 21 381 404 [ce6:III:13371137-13371160:-] 0.4777 131 0 -16.43 -0.2179 MIMAT0015112 cel-miR-229* 176758 lis-1 gauacugugggcuauGGAAAGa |||||| ugguugugaaucuucCCUUUCa 2 8 243 264 [ce6:III:13371277-13371298:-] 0.4777 120 6 -13.71 -0.1223 MIMAT0015119 cel-miR-247* 176758 lis-1 ccaUUAAUCUUU---GAAAAGAGAu |:||| ||| :|||||||| uuaAGUUAAAAAUAUUUUUUCUCUu 2 20 270 294 [ce6:III:13371247-13371271:-] 0.4777 162 7 -11.29 -1.1792 MIMAT0015241 cel-miR-797* 176758 lis-1 uaAAGUGUCUUUGGUUACUUUu ||: : ||| | ||||||| aaUUUUUCGAACCAAAUGAAAu 2 21 452 473 [ce6:III:13371068-13371089:-] 0.4704 160 7 -11.75 -0.3683 MIMAT0005522 cel-miR-1021 176758 lis-1 ggcuccUAAAGUGUACUAGA-GUGAa ||| ||| | ||| |||| gcuuucAUUGCACUU--UCUCCACUu 2 20 47 70 [ce6:III:13371471-13371494:-] 0.5192 120 0 -11.08 -1.1237 MIMAT0006587 cel-miR-1820 176758 lis-1 cuuguaguagcuuuuuguUAGUUUu |||||| gcacuuucuccacuuuucAUCAAAa 2 8 56 80 [ce6:III:13371461-13371485:-] 0.5192 120 6 -4.98 -0.2883 MIMAT0006771 cel-miR-1829c 176758 lis-1 auguugguaGAACUU-----AAAGCGAa |||||: ||||||| guuucuuucCUUGAGCAAUUUUUCGCUu 2 15 344 371 [ce6:III:13371170-13371197:-] 0.4777 141 7 -14.89 -0.9643 MIMAT0006774 cel-miR-1832 176758 lis-1 uaguagcuaagcgAGGCGGGu ||||||| cccucuuaaauuaUCCGCCCu 2 9 311 331 [ce6:III:13371210-13371230:-] 0.4777 140 7 -15.70 -1.1978 MIMAT0011441 cel-miR-2213* 176758 lis-1 aguuugacacuucucAGGCGGu |||||| cccccucuuaaauuaUCCGCCc 2 8 309 330 [ce6:III:13371211-13371232:-] 0.4777 120 6 -10.94 -0.1582 MIMAT0011455 cel-miR-2218a 176758 lis-1 acuccgaauuuuGAACAUCAAAc :||||||||| aaacucauuuuuUUUGUAGUUUa 2 12 428 450 [ce6:III:13371091-13371113:-] 0.4704 151 7 -10.10 -1.2449 MIMAT0011457 cel-miR-2218b 176758 lis-1 cuUUUACUACAUCAAACAUCAGa || | || | ||||||||: aaAACUCAUUUUUUUUGUAGUUu 2 22 427 449 [ce6:III:13371092-13371114:-] 0.4704 149 0 -9.59 -0.1040 MIMAT0000039 cel-miR-67 176758 lis-1 agAUGAGAAAGAUCCUCCAACACu || || || || ||||||| ugUA-UCGCCCU-GGUGGUUGUGa 2 23 230 251 [ce6:III:13371290-13371311:-] 0.4777 150 7 -18.75 -0.6251 MIMAT0004220 cel-miR-785 176758 lis-1 agAUGUGUUUUGUUAAG-UGAAu | ||: ||| | ||| |||| uuUUCAUCAAAAAUUUCAACUUu 2 21 69 91 [ce6:III:13371450-13371472:-] 0.4735 128 0 -8.89 -1.0049 MIMAT0004227 cel-miR-792 176758 lis-1 agacuuucaacuucucUAAAGUu |||||| ccacuuuucaucaaaaAUUUCAa 2 8 65 87 [ce6:III:13371454-13371476:-] 0.5192 120 6 -4.72 -0.1818

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score lis-1 RAID00440906 cel-miR-792-3p miRNA MIMAT0004227 lis-1 mRNA 176758 Prediction 0.1828 lis-1 RAID01278586 cel-miR-67-3p miRNA MIMAT0000039 lis-1 mRNA 176758 Prediction 0.2381 lis-1 RAID02085158 cel-miR-785-3p miRNA MIMAT0004220 lis-1 mRNA 176758 Prediction 0.1828