DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015112 cel-miR-229* 178361 lst-4 gauacugugggcuauGGAAAGa |||||| uaugaguugaaaaauCCUUUCa 2 8 298 319 [ce6:IV:14061018-14061039:-] 0.4853 120 6 -11.60 -0.3388 MIMAT0015115 cel-miR-239b* 178361 lst-4 aaaaacgUGUGG--UG-UUUUCAcg | ||| || |||||| uccuaaaAGACCAAACGAAAAGUcc 3 16 10 34 [ce6:IV:14066667-14066691:-] 0.4948 125 0 -10.03 -0.1971 MIMAT0015241 cel-miR-797* 178361 lst-4 uaaAGUGUCUU-UGG-UUACUUUu || :| || ||| || |||| auaUCCUAAAAGACCAAACGAAAa 2 20 7 30 [ce6:IV:14066671-14066694:-] 0.4948 125 0 -9.73 -0.1418 MIMAT0015267 cel-miR-1829a* 178361 lst-4 auguuUGUUAA---UCUUCAGGGGAa ||| || | || |||||| cguucACAUUUGAAAAAAAUCCCCUu 2 19 227 252 [ce6:IV:14061085-14061110:-] 0.4853 125 6 -13.33 -0.1131 MIMAT0006771 cel-miR-1829c 178361 lst-4 auGUUGGUAGAACUUAA-AGCGAa |:|:| || | || ||||| gaCGAUCCUCGAGCUUUAUCGCUc 2 22 296 319 [ce6:IV:14066382-14066405:-] 0.5428 121 0 -14.03 -0.5259 MIMAT0011426 cel-miR-2207* 178361 lst-4 acacacguaacucGGACACGUa ::|||||| uaauccauaauuuUUUGUGCAa 2 10 143 164 [ce6:IV:14061173-14061194:-] 0.4853 125 6 -9.72 -0.2219 MIMAT0011444 cel-miR-2214 178361 lst-4 uugcggccaGUUCAACAACA-GUUAc :|| || |||| |||| ucuaauccaUAAUUUUUUGUGCAAUu 2 17 141 166 [ce6:IV:14061171-14061196:-] 0.4853 124 0 -5.59 -0.9848 MIMAT0011458 cel-miR-2218b* 178361 lst-4 agagugAUGUU-UGAUG-UUUAAa |:||| |||| ||||| uuuuugUGCAAUUCUACUAAAUUc 2 17 154 177 [ce6:IV:14061160-14061183:-] 0.4853 123 0 -9.21 -0.6314 MIMAT0000014 cel-miR-43 178361 lst-4 cgCUGU--CGUUCAUUUGACACUAu |||| : | | ||||| ||| agGACAUUUUUAUUUAACUGGGAUu 2 22 365 389 [ce6:IV:14066312-14066336:-] 0.5428 124 0 -10.62 -0.1047 MIMAT0000030 cel-miR-58 178361 lst-4 uaACGGC--AUG---ACUUGCUA-GAGu |||:| |:| ||:||||| ||| aaUGCUGUUUGCUCGUGGACGAUCCUCg 2 21 279 306 [ce6:IV:14066395-14066422:-] 0.5428 122 0 -24.12 -0.3004 MIMAT0000032 cel-miR-60 178361 lst-4 acuugaucuuuuacacGUAUUAu |||||| uuccuacuuucuaaucCAUAAUu 2 8 132 154 [ce6:IV:14061183-14061205:-] 0.4853 120 6 -4.93 -0.1472 MIMAT0000035 cel-miR-63 178361 lst-4 aaAGGUUGA-GCGAAGUCACAGUau |:::|:| | :||: |||||| uaUUUGAUUGCCUUUUUGUGUCAga 3 23 18 42 [ce6:IV:14061295-14061319:-] 0.6944 141 0 -12.48 -0.3517 MIMAT0000036 cel-miR-64 178361 lst-4 aaGCCAUUGCGAAGUCACAGUau :| | :| :||: |||||| uuUGAUUGCCUUUUUGUGUCAga 3 22 20 42 [ce6:IV:14061295-14061317:-] 0.6944 137 0 -11.95 -0.3574 MIMAT0000037 cel-miR-65 178361 lst-4 aaGCCAAUGCGAAGUCACAGUau :| ||:| :||: |||||| uuUGAUUGCCUUUUUGUGUCAga 3 22 20 42 [ce6:IV:14061295-14061317:-] 0.6944 145 0 -15.24 -0.3545 MIMAT0000038 cel-miR-66 178361 lst-4 aguguAGGGAUUAGUCACAGUac | ||| |: |||||| uugauUGCCU-UUUUGUGUCAga 3 19 21 42 [ce6:IV:14061295-14061316:-] 0.6944 128 0 -14.52 -0.3488 MIMAT0000047 cel-miR-75 178361 lst-4 acuucggccaaccaUCGAAAUu ||||||| guggacgauccucgAGCUUUAu 2 9 293 314 [ce6:IV:14066387-14066408:-] 0.5428 140 7 -11.72 -0.1169 MIMAT0000051 cel-miR-79 178361 lst-4 ucgaaaCCAUUGGAUCGAAAUa | | :| ||||||| guggacGAUCCUCGAGCUUUAu 2 17 293 314 [ce6:IV:14066387-14066408:-] 0.5428 144 7 -13.98 -0.1192 MIMAT0000282 cel-miR-124 178361 lst-4 accGUAAGUGGCGCACGGAAu :||| ::| |||||| uuuUAUUAUUUGAUUGCCUUu 2 19 12 32 [ce6:IV:14061305-14061325:-] 0.6944 122 6 -10.53 -0.1349 MIMAT0000284 cel-miR-229 178361 lst-4 gcuaccuuuucuauugguCACAGUaa |||||| uuauuugauugccuuuuuGUGUCAga 3 9 17 42 [ce6:IV:14061295-14061320:-] 0.6944 120 0 -11.57 -0.3603 MIMAT0000286 cel-miR-231 178361 lst-4 aaGACGGACA---ACUA-GUGCUCGAAu :|||: || ||| | ||||||| guUUGCUCGUGGACGAUCCUCGAGCUUu 2 23 285 312 [ce6:IV:14066389-14066416:-] 0.5428 152 7 -23.62 -0.3586 MIMAT0000290 cel-miR-235 178361 lst-4 aguccggccccucuCACGUUAu ||||||| auccauaauuuuuuGUGCAAUu 2 9 145 166 [ce6:IV:14061171-14061192:-] 0.4853 140 7 -8.68 -1.0888 MIMAT0000306 cel-miR-250 178361 lst-4 acgguuGUCAACUGACACUAa :| || |||| ||| cauuuuUAUUUAACUGGGAUu 2 16 369 389 [ce6:IV:14066312-14066332:-] 0.5428 123 0 -6.64 -0.1047 MIMAT0004215 cel-miR-253 178361 lst-4 ggAAGGGUGUUGCGGAUGAUu ||: ::|||: :|||||| uuUUUGUGCAAU-UCUACUAa 2 20 154 173 [ce6:IV:14061164-14061183:-] 0.4853 141 6 -14.75 -0.1310 MIMAT0004215 cel-miR-253 178361 lst-4 ggaaggguguugcgGAUGAUu |||||| uccagauuuauuugCUACUAc 2 8 224 244 [ce6:IV:14066457-14066477:-] 0.5100 120 6 -9.55 -0.1370 MIMAT0000314 cel-miR-259 178361 lst-4 acgAUGGUCUAAUCCUACU-CUAAa ||||| || |||| |||| uugUACCAUAU----AUGAUGAUUg 2 22 203 223 [ce6:IV:14061114-14061134:-] 0.4853 120 0 -9.38 -0.8420 MIMAT0004219 cel-miR-784 178361 lst-4 agaugcaugcgucuAACACGGu |||||:| auuugauugccuuuUUGUGUCa 2 9 19 40 [ce6:IV:14061297-14061318:-] 0.6944 124 0 -14.02 -0.1182 MIMAT0004219 cel-miR-784 178361 lst-4 agaugcaugcgucuAACACGgu |||||| uaauccauaauuuuUUGUGCaa 3 9 143 164 [ce6:IV:14061173-14061194:-] 0.4853 120 0 -10.77 -0.1808 MIMAT0004222 cel-miR-787 178361 lst-4 gcUUUCUAUGAUUUUGCUCGAAu :| ||| || ||||||| ugGACGAUCCU----CGAGCUUu 2 22 294 312 [ce6:IV:14066389-14066407:-] 0.5428 144 7 -15.05 -0.3367 MIMAT0004227 cel-miR-792 178361 lst-4 agacuUUCAACUUCUCUAAAGUu || || | ||||||| cuacuAAAUUCCCGUGAUUUCAa 2 19 167 189 [ce6:IV:14061148-14061170:-] 0.4853 150 7 -7.77 -0.8508 MIMAT0004232 cel-miR-797 178361 lst-4 agaagaGUAACACUAA--CGACACUAu |||| | ||| ||| ||| aaaggaCAUUUUUAUUUAACUGGGAUu 2 20 363 389 [ce6:IV:14066312-14066338:-] 0.5428 126 0 -7.37 -0.1026

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score lst-4 RAID00088985 cel-miR-65-5p miRNA MIMAT0000037 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID00241575 cel-miR-77-3p miRNA MIMAT0000049 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID00260945 cel-miR-231-3p miRNA MIMAT0000286 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID00333930 cel-miR-253-3p miRNA MIMAT0004215 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID00367035 cel-miR-124-3p miRNA MIMAT0000282 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID00879782 cel-miR-79-3p miRNA MIMAT0000051 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID00931324 cel-miR-64-5p miRNA MIMAT0000036 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID01167945 cel-miR-787-3p miRNA MIMAT0004222 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID01215349 cel-miR-792-3p miRNA MIMAT0004227 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID01369174 cel-miR-63-3p miRNA MIMAT0000035 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID01564763 cel-miR-85-3p miRNA MIMAT0000058 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID01761219 cel-miR-784-5p miRNA MIMAT0004219 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID01926225 cel-miR-75-3p miRNA MIMAT0000047 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID02123240 cel-miR-229-5p miRNA MIMAT0000284 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID02174694 cel-miR-250-3p miRNA MIMAT0000306 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID02779123 cel-miR-58a-3p miRNA MIMAT0000030 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID03285689 cel-miR-235-3p miRNA MIMAT0000290 lst-4 mRNA 178361 Prediction 0.2202 lst-4 RAID03333877 cel-miR-66-5p miRNA MIMAT0000038 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID03572163 cel-miR-43-3p miRNA MIMAT0000014 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID03803940 cel-miR-797-5p miRNA MIMAT0004232 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID03920004 cel-miR-60-3p miRNA MIMAT0000032 lst-4 mRNA 178361 Prediction 0.1828 lst-4 RAID03988244 cel-miR-259-5p miRNA MIMAT0000314 lst-4 mRNA 178361 Prediction 0.1828