DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015094 cel-miR-37* 177580 ntl-4 cgUG-GCGUUGCCUGUGGGUGu || | ||| | ||||||| acACACACAAAAG-CACCCACa 2 20 20 40 [ce6:IV:7914270-7914290:+] 0.6449 148 7 -23.55 -1.0180 MIMAT0015094 cel-miR-37* 177580 ntl-4 cguggcguUGCCU-GUGGGUgu ||| | |||||| uuucauacACGUAUCACCCAga 3 14 758 779 [ce6:IV:7915008-7915029:+] 0.5708 128 0 -17.60 -0.1198 MIMAT0015096 cel-miR-46* 177580 ntl-4 gacAGU-UAU-CU-GCCGAGAGAa ||| ||: | :|||||||| ucuUCAUAUGUUAUUGGCUCUCUu 2 19 219 242 [ce6:IV:7914469-7914492:+] 0.5708 147 7 -20.67 -0.8934 MIMAT0015097 cel-miR-47* 177580 ntl-4 ugacAGU-UAU-CUGA-CGAGAGAa ||| ||: |:| ||||||| uucuUCAUAUGUUAUUGGCUCUCUu 2 19 218 242 [ce6:IV:7914468-7914492:+] 0.5708 147 7 -15.09 -0.8934 MIMAT0015119 cel-miR-247* 177580 ntl-4 ccauUAAUCUUUG-AAAAGAGau ||| | | ||||||| uucuAUUCCUACCGUUUUCUCcc 3 19 63 85 [ce6:IV:7914313-7914335:+] 0.6449 129 0 -6.47 -0.1027 MIMAT0000321 cel-miR-265 177580 ntl-4 uaugguGGGAAGGAGGGAGu ::|||:||||||| uuuauuUUCUUUCUCCCUCu 2 15 607 626 [ce6:IV:7914857-7914876:+] 0.5708 158 7 -21.95 -1.2018 MIMAT0000321 cel-miR-265 177580 ntl-4 uauGGUGG-GAAGGAGGGAGu |:||| :||:||||||: uucCUACCGUUUUCUCCCUUc 2 18 68 88 [ce6:IV:7914318-7914338:+] 0.6449 148 0 -23.29 -0.1828 MIMAT0015239 cel-miR-786* 177580 ntl-4 cauuUAUGGGGU-UGACUAUAAGc || |::|| | | |||||| uauuAUUCUUCAUAAUAAUAUUCu 2 20 198 221 [ce6:IV:7914448-7914471:+] 0.5708 130 6 -7.61 -0.1289 MIMAT0015240 cel-miR-788* 177580 ntl-4 gcuAAGAUUA--GGUAAAGg || | :| ||||||: uuuUUGUCGUUACCAUUUUc 2 16 738 757 [ce6:IV:7914988-7915007:+] 0.5708 126 0 -10.22 -0.1019 MIMAT0005522 cel-miR-1021 177580 ntl-4 ggcuCCUAAAGUGUACUAG-AGUGAa | || | || ||| ||||| acacGUAUCACCCAGAAUCUUCACUu 2 22 764 789 [ce6:IV:7915014-7915039:+] 0.5708 121 0 -13.08 -0.5527 MIMAT0006584 cel-miR-1817 177580 ntl-4 guacuaucUCUUCUGUAACCGAu | | | :||||||| uauucuucAUAUGUUAUUGGCUc 2 16 216 238 [ce6:IV:7914466-7914488:+] 0.5708 147 7 -10.42 -0.9923 MIMAT0006586 cel-miR-1819 177580 ntl-4 agguaguucGAGUUAGUAAGGu | :::||||||| uucugcuguCCUGGUCAUUCCu 2 14 559 580 [ce6:IV:7914809-7914830:+] 0.5708 145 7 -14.39 -0.3828 MIMAT0011455 cel-miR-2218a 177580 ntl-4 acuccGAAUUUUGAACAUCAAAc :||:||| | |||||| uuucuUUUGAAA-GUUUAGUUUa 2 19 710 731 [ce6:IV:7914960-7914981:+] 0.5708 128 6 -7.67 -0.1946 MIMAT0011459 cel-miR-2219* 177580 ntl-4 cuGCUACACG-CUCUC-UUUCGACa | :|| | || | ||||||| ugCAGUGAACAGACUGCAAAGCUGa 2 22 434 458 [ce6:IV:7914684-7914708:+] 0.5708 143 7 -14.30 -0.2123 MIMAT0011462 cel-miR-2220 177580 ntl-4 gacauucagguguuUGUUAACu ||||||| -------uuuuggcACAAUUGc 2 9 1 15 [ce6:IV:7914251-7914265:+] 0.6449 140 7 -8.39 -0.3897 MIMAT0014446 cel-miR-2953-5p 177580 ntl-4 uaaaAG-UGCUUGUGAAGACAu || ||| : ::|||||| agaaUCAACGUG-GUUUCUGUa 2 18 683 703 [ce6:IV:7914933-7914953:+] 0.5708 130 6 -14.21 -0.1319 MIMAT0000003 cel-miR-1 177580 ntl-4 auGUA--UGAAGAAAUGUAAGGu ||| ||| | ||||||: auCAUCAACUCCAACACAUUCUa 2 20 177 199 [ce6:IV:7914427-7914449:+] 0.5546 134 0 -10.58 -0.2014 MIMAT0000015 cel-miR-44 177580 ntl-4 ucgacuuacacaGAGAUCAGu :||||||: cacacacccucaUUCUAGUUa 2 10 37 57 [ce6:IV:7914287-7914307:+] 0.6449 125 0 -10.56 -0.1104 MIMAT0000016 cel-miR-45 177580 ntl-4 ucgacuuacacaGAGAUCAGu :||||||: cacacacccucaUUCUAGUUa 2 10 37 57 [ce6:IV:7914287-7914307:+] 0.6449 125 0 -10.56 -0.1104 MIMAT0000032 cel-miR-60 177580 ntl-4 acuugaucuuuuacacGUAUUAu |||||| acauucuauuauucuuCAUAAUa 2 8 192 214 [ce6:IV:7914442-7914464:+] 0.5546 120 6 -5.60 -0.2077 MIMAT0000033 cel-miR-61 177580 ntl-4 cuacucauugccAAGAUCAGu |||||||: cacacacccucaUUCUAGUUa 2 10 37 57 [ce6:IV:7914287-7914307:+] 0.6449 129 0 -9.99 -0.1093 MIMAT0000043 cel-miR-71 177580 ntl-4 agUGAUGGGUACAGAAAGu ::|||| | |||||| ucGUUACCAUUUUCUUUCa 2 18 744 762 [ce6:IV:7914994-7915012:+] 0.5708 129 6 -18.15 -0.1492 MIMAT0000059 cel-miR-86 177580 ntl-4 cugacaccGUUUCGUAAGUGAAu ||:| : ||||||| guaucaccCAGAAUCUUCACUUc 2 16 768 790 [ce6:IV:7915018-7915040:+] 0.5708 151 7 -8.32 -0.3372 MIMAT0000288 cel-miR-233 177580 ntl-4 ggcgUGUACG-CGUAA-CGAGUu |||||: |||| ||||| uacgACAUGUAUCAUUAGCUCAu 2 18 265 287 [ce6:IV:7914515-7914537:+] 0.5708 128 0 -19.19 -0.8661 MIMAT0000302 cel-miR-246 177580 ntl-4 cgAGGAUGGGCU-UUGUACAUu |||| :|: | :||||||| ugUCCUCUCUUACGACAUGUAu 2 20 255 276 [ce6:IV:7914505-7914526:+] 0.5708 158 7 -16.55 -0.4197 MIMAT0000303 cel-miR-247 177580 ntl-4 ucuucucuuauccGAGAUCAGu :||||||: ccacacacccucaUUCUAGUUa 2 10 36 57 [ce6:IV:7914286-7914307:+] 0.6449 125 0 -10.55 -0.1104 MIMAT0000306 cel-miR-250 177580 ntl-4 acgGUUGUCAACUG-ACACUAa :::||||| | |||||| uugUGGCAGUUUUCAUGUGAUu 2 19 629 650 [ce6:IV:7914879-7914900:+] 0.5708 126 6 -15.63 -0.8434 MIMAT0000310 cel-miR-254 177580 ntl-4 ggaugucagCGCU-UUCUAAACGu |||| :||||||| uucuuuuagGCGAUUGGAUUUGCu 2 15 851 874 [ce6:IV:7915101-7915124:+] 0.5708 149 7 -18.06 -0.4272 MIMAT0004220 cel-miR-785 177580 ntl-4 agaUGUGUUUUGUUAAGUGAAu || ||:||: ||||||| aucACCCAGAAU-CUUCACUUc 2 20 770 790 [ce6:IV:7915020-7915040:+] 0.5708 157 7 -12.09 -0.3317 MIMAT0004231 cel-miR-796 177580 ntl-4 aaUGAUUGGAGUUGAUGUAAGGu |: |||: |||| ||||||: ucAUCAACUCCAAC-ACAUUCUa 2 22 178 199 [ce6:IV:7914428-7914449:+] 0.5546 151 0 -17.52 -0.1874

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ntl-4 RAID00021005 cel-miR-71-5p miRNA MIMAT0000043 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID00266376 cel-miR-45-3p miRNA MIMAT0000016 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID00493155 cel-miR-70-3p miRNA MIMAT0000042 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID00574461 cel-miR-250-3p miRNA MIMAT0000306 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID00922879 cel-miR-796 miRNA MIMAT0004231 ntl-4 mRNA 177580 Prediction 0.2202 ntl-4 RAID01023250 cel-miR-233-3p miRNA MIMAT0000288 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID01085347 cel-miR-44-3p miRNA MIMAT0000015 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID01259936 cel-miR-785-3p miRNA MIMAT0004220 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID01432926 cel-miR-61-3p miRNA MIMAT0000033 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID01725614 cel-miR-1-3p miRNA MIMAT0000003 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID02290951 cel-miR-60-3p miRNA MIMAT0000032 ntl-4 mRNA 177580 Prediction 0.2381 ntl-4 RAID02868048 cel-miR-247-3p miRNA MIMAT0000303 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID03558126 cel-miR-86-5p miRNA MIMAT0000059 ntl-4 mRNA 177580 Prediction 0.1828 ntl-4 RAID03613977 cel-miR-254-3p miRNA MIMAT0000310 ntl-4 mRNA 177580 Prediction 0.2202 ntl-4 RAID03742721 cel-miR-246-3p miRNA MIMAT0000302 ntl-4 mRNA 177580 Prediction 0.2202