rba-1
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0005522cel-miR-1021172801rba-1ggcuCCUAAAGUG--UACUAGAGUGAa | ||||:|| || ||||||| ugucGAAUUUUACUAAUUUUCUCACUu2221844[ce6:I:9616553-9616579:-]0.45811647-20.39-1.0506
MIMAT0011425cel-miR-2207172801rba-1gaauauguguCAGAGUUAA-GUGu |||| |||| ||| --------ucGUCUAAAUUGCACu214116[ce6:I:9616581-9616596:-]0.45811210-8.89-1.1394
MIMAT0000003cel-miR-1172801rba-1auguaugaagaAAUGUAAGGu | ||||||| gaauguaaaaaUCACAUUCCu2115474[ce6:I:9616523-9616543:-]0.45811427-8.59-0.7135
MIMAT0000058cel-miR-85172801rba-1cgugcugaaAAGUUUA---UGAAACAu | :|||| ||||||| ------ucgUCUAAAUUGCACUUUGUc216121[ce6:I:9616576-9616596:-]0.45811467-8.42-0.4072
MIMAT0004231cel-miR-796172801rba-1aaugauuggagUUGAUGUAAGGu ||: ||||||| uugaauguaaaAAUCACAUUCCu2135274[ce6:I:9616523-9616545:-]0.45811487-10.40-0.7284
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
rba-1; K07A1.11cel-miR-14075AUGUAUGA--AGAAA-------------UGUAAGGU || || ||||| |||||||CACUU-CUGAUCUUUGAAUGUAAAAAUCACAUUCCU
rba-1; K07A1.11cel-miR-7964475AAUGAUUGGAG----------UUGAUGUAAGGU ||:|:||: ||: |||||||--UCUGAUCUUUGAAUGUAAAAAUCACAUUCCU
rba-1; K07A1.11cel-miR-801943-AGCCGAAAGUUGAUUACUAGAGU- ||| |||: |||||| |||||GUCGAAUUUU-ACUAAUUUUCUCAC
rba-1; K07A1.11cel-miR-803053agccgAAAG-UUGAUUACUAGAgu |||| ||| ||||||ctaatTTTCTCACTTCTGATCTtt
rba-1; K07A1.11cel-miR-16774AUGUA----UGAAGAAA------------------UGUAAGGU |||||| |||||||AAUUUUCUCACUUCUGAUCUUUGAAUGUAAAAAUCACAUUCCU
rba-1; K07A1.11cel-miR-7966774AAU----------GAUUGGAG----------UUGAUGUAAGGU ||:|:||: ||: |||||||AAUUUUCUCACUUCUGAUCUUUGAAUGUAAAAAUCACAUUCCU
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
rba-1RAID00133433cel-miR-796miRNAMIMAT0004231rba-1mRNA172801Prediction0.1828
rba-1RAID00945905cel-miR-1-3pmiRNAMIMAT0000003rba-1mRNA172801Prediction0.1828
rba-1RAID03212785cel-miR-85-3pmiRNAMIMAT0000058rba-1mRNA172801Prediction0.1828