rpn-10
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0015099cel-miR-51*172977rpn-10acGUGGACAUGGACGAAGGUAc :| :| || :| |||||| cgUAAUUCUAAUUUAUUCCAUc221109130[ce6:I:10730787-10730808:-]0.55711246-7.25-0.1504
MIMAT0005031cel-miR-1018172977rpn-10gaCAUUCAGGUUA------CUAGAGAGa |||| ||:||| ||||||| gcGUAAUUCUAAUUUAUUCCAUCUCUCa221108135[ce6:I:10730782-10730809:-]0.55711517-14.76-1.1496
MIMAT0000042cel-miR-70172977rpn-10uaccuuuguGGUUGCUGCAUAAu :|| | ||||||| ucucauuuuUCAUC-ACGUAUUu215131152[ce6:I:10730765-10730786:-]0.55711447-10.15-0.8825
MIMAT0000287cel-miR-232172977rpn-10aguggCGUCAAUUCUACGUAAAu |: ||| ||:|||| gugaaGUUGUUUUAUUGUAUUUu219931[ce6:I:10730886-10730908:-]0.55711300-10.02-0.1772
MIMAT0000291cel-miR-236172977rpn-10ucgcAGUAAUGGACU-GU-CAUAAu ||||| ::| | || ||||| ucucUCAUU-UUUCAUCACGUAUUu220129152[ce6:I:10730765-10730788:-]0.55711200-8.49-0.8532
MIMAT0000305cel-miR-249172977rpn-10ccguugcgaguuuucaGGACACu |||||| -----------augucCCUGUGa28112[ce6:I:10730905-10730916:-]0.55711206-12.25-0.2678
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
rpn-10; B0205.3cel-miR-2644764GUAUUGUUGUUGGUGGG-CGG- ||: ||||:|| |||-----GAAUCACCAUCCAGCCA
rpn-10; B0205.3cel-miR-3488111-GUUGGUC--GAUUGGUGUGACGGA ||||: || || |:||||CCAACUUCUUCUUCCC-CGCUGCG-
rpn-10; B0205.3cel-miR-3885110UGAGGUCAAA-AAGA--GGGCCACU ||||| |||| |||| ||UCUCCAACUUCUUCUUCCCCGCUGC
rpn-10; B0205.3cel-miR-7280105-AGUCGAUACGGUUGU---AGAACGGA ||||: ||||| |||| ||UUCAGUCU--CCAACUUCUUCUUCCCC
rpn-10; B0205.3cel-miR-2644869gUAUUGUU--GUUGGUGGGcgg || || | ||:||||||aATCACCATCCAGCCACCCcaa
rpn-10; B0205.3cel-miR-3489111GUUG--GUCGAUUGGUGUGACGga|||| | || || |:||||CAACTTCTTCT-TCCCCGCTGCgt
rpn-10; B0205.3cel-miR-7281104AGUC-GAUACGGUU---GUAGAACGGa|||| || |||| | |||| ||TCAGTCT---CCAACTTCTTCTTCCCc
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
rpn-10RAID01011396cel-miR-249-3pmiRNAMIMAT0000305rpn-10mRNA172977Prediction0.1828
rpn-10RAID01890721cel-miR-232-3pmiRNAMIMAT0000287rpn-10mRNA172977Prediction0.1828
rpn-10RAID01928489cel-miR-236-3pmiRNAMIMAT0000291rpn-10mRNA172977Prediction0.1828
rpn-10RAID03379295cel-miR-70-3pmiRNAMIMAT0000042rpn-10mRNA172977Prediction0.1828