DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000322 cel-miR-266 174479 scp-1 cgaAACGGUUUCAGAACGGa || :::|| ||||||| uagUUUUUGAAAUCUUGCCu 2 18 18 37 [ce6:II:9338678-9338697:+] 0.4591 157 7 -15.10 -1.1941 MIMAT0000324 cel-miR-268 174479 scp-1 ugguuUGA--CGAAGA-UUAAGAACGg ||| |:||:| || |||||| auauuACUUAGUUUUUGAAAUCUUGCc 2 20 10 36 [ce6:II:9338670-9338696:+] 0.4591 133 6 -17.02 -0.1721 MIMAT0000325 cel-miR-269 174479 scp-1 ucAAAACGGUCUCAGAACGg ||||| | | |||||| guUUUUG--A-AAUCUUGCc 2 19 20 36 [ce6:II:9338680-9338696:+] 0.4591 121 6 -12.50 -0.1705 MIMAT0015239 cel-miR-786* 174479 scp-1 cauuuaugGGGUUGACUAUAAgc :|:| : |||||| -------aUCUAUUAGAUAUUac 3 16 1 16 [ce6:II:9338661-9338676:+] 0.4591 127 0 -7.42 -0.3727 MIMAT0006587 cel-miR-1820 174479 scp-1 cuuguAG-UAGCUUUUUGUUAGUUUu || ||: : | | ||||||| uguuuUCAAUUUGUAUA-AAUCAAAg 2 21 126 150 [ce6:II:9338786-9338810:+] 0.4658 145 7 -7.81 -1.2342 MIMAT0006588 cel-miR-1821 174479 scp-1 gauggauugauauuCUGGAGu |||||| uacgaacacuuacuGACCUCa 2 8 86 106 [ce6:II:9338746-9338766:+] 0.4658 120 6 -15.62 -0.1647 MIMAT0011448 cel-miR-2216* 174479 scp-1 uccguguaaaauucAUCUAUc |||||| --------aucuauUAGAUAu 2 8 1 13 [ce6:II:9338661-9338673:+] 0.4591 120 6 -2.57 -0.1250 MIMAT0000001 cel-let-7 174479 scp-1 uugAUAUGU---UGGAUGA-UGGAGu |||||: ||:|||| ||||| uuaUAUACGAACACUUACUGACCUCa 2 20 81 106 [ce6:II:9338741-9338766:+] 0.4658 134 0 -23.01 -1.1816 MIMAT0000014 cel-miR-43 174479 scp-1 cgcuGUCGUUCAUUUG-ACACUAu ||| || || | |||||| auuuCAGGAA-UAUUCAUGUGAUa 2 20 58 80 [ce6:II:9338718-9338740:+] 0.4658 121 6 -13.42 -1.0669 MIMAT0000044 cel-miR-72 174479 scp-1 agUCGAUACGGUUGUAGAACGGa ||:| | ::| |||||||| uuAGUUUU--UGAAAUCUUGCCu 2 22 17 37 [ce6:II:9338677-9338697:+] 0.4591 154 7 -18.53 -1.1957 MIMAT0000045 cel-miR-73 174479 scp-1 ugACUUGACGGAUGUAGAACGGu | |::| :: | |||||||| acUUAGUUUUUGAAAUCUUGCCu 2 22 15 37 [ce6:II:9338675-9338697:+] 0.4591 157 7 -15.64 -1.1973 MIMAT0000046 cel-miR-74 174479 scp-1 acAUCUGACGGUAAAGAACGGu ||| :| : | ||||||| cuUAGUUUUUGAAAUCUUGCCu 2 21 16 37 [ce6:II:9338676-9338697:+] 0.4591 152 7 -13.32 -1.1973 MIMAT0000057 cel-miR-84 174479 scp-1 auguuauaaUGUAUGA-UGGAGu || |||| ||||| uauacgaacACUUACUGACCUCa 2 14 84 106 [ce6:II:9338744-9338766:+] 0.4658 121 0 -16.30 -1.1798 MIMAT0000282 cel-miR-124 174479 scp-1 acCGUAAGUGGCGCACGGAAu || || :: :||||||| uuGCCUU--UUAUGUGCCUUu 2 20 32 50 [ce6:II:9338692-9338710:+] 0.5038 144 7 -13.38 -1.2011 MIMAT0000300 cel-miR-244 174479 scp-1 guAUGGUGAAACAUG-UUGGUUUCu | :|| ||||||: ||:||||| guUUUCAAUUUGUAUAAAUCAAAGu 2 23 127 151 [ce6:II:9338787-9338811:+] 0.4658 161 0 -17.33 -0.1162 MIMAT0000307 cel-miR-251 174479 scp-1 uuauucucgccgugGUGAUGAAUu :|:|||||| ----aucuauuagaUAUUACUUAg 2 11 1 20 [ce6:II:9338661-9338680:+] 0.4591 130 6 -9.74 -0.1941 MIMAT0000308 cel-miR-252 174479 scp-1 aaUGGACGCCGUGAUGAUGAAUa |:|| : | ||:|||||| --AUCUAUUAGA-UAUUACUUAg 2 22 1 20 [ce6:II:9338661-9338680:+] 0.4591 135 6 -9.63 -0.1941 MIMAT0004219 cel-miR-784 174479 scp-1 agaugcaugcgucuaACACGGu |||||| aaaucuugccuuuuaUGUGCCu 2 8 27 48 [ce6:II:9338687-9338708:+] 0.5038 120 6 -14.03 -0.1416 MIMAT0004232 cel-miR-797 174479 scp-1 agaAGAGUAACACUAACGACACUAu |:||| ||| |||||| cuaUUUCAGGAAUAUUCAUGUGAUa 2 23 56 80 [ce6:II:9338716-9338740:+] 0.5072 126 6 -12.65 -0.1234

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score scp-1 RAID00118292 cel-miR-797-5p miRNA MIMAT0004232 scp-1 mRNA 174479 Prediction 0.2381 scp-1 RAID00544983 cel-miR-251 miRNA MIMAT0000307 scp-1 mRNA 174479 Prediction 0.1828 scp-1 RAID00754176 cel-miR-124-3p miRNA MIMAT0000282 scp-1 mRNA 174479 Prediction 0.2381 scp-1 RAID01185633 cel-miR-72-5p miRNA MIMAT0000044 scp-1 mRNA 174479 Prediction 0.1828 scp-1 RAID01296317 cel-miR-252-5p miRNA MIMAT0000308 scp-1 mRNA 174479 Prediction 0.1828 scp-1 RAID02149639 cel-miR-784-5p miRNA MIMAT0004219 scp-1 mRNA 174479 Prediction 0.1828 scp-1 RAID02868180 cel-miR-2-3p miRNA MIMAT0000004 scp-1 mRNA 174479 Prediction 0.1828 scp-1 RAID03160490 cel-miR-74-3p miRNA MIMAT0000046 scp-1 mRNA 174479 Prediction 0.2202 scp-1 RAID03207511 cel-miR-84-5p miRNA MIMAT0000057 scp-1 mRNA 174479 Prediction 0.1828 scp-1 RAID03498732 cel-let-7-5p miRNA MIMAT0000001 scp-1 mRNA 174479 Prediction 0.1828 scp-1 RAID03721246 cel-miR-244-5p miRNA MIMAT0000300 scp-1 mRNA 174479 Prediction 0.1828 scp-1 RAID03950069 cel-miR-43-3p miRNA MIMAT0000014 scp-1 mRNA 174479 Prediction 0.2202 scp-1 RAID04017566 cel-miR-73-3p miRNA MIMAT0000045 scp-1 mRNA 174479 Prediction 0.2202