DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015109 cel-miR-81* 181055 sem-5 agagucuagugccacUUUUGGc |||||| uuuugcaauucauccAAAACCa 2 8 517 538 [ce6:X:7959618-7959639:-] 0.5276 120 6 -8.66 -0.1079 MIMAT0015110 cel-miR-84* 181055 sem-5 cggcuCAAUCAACUUUGUAACAc ||| | || ||||||| uuuucGUUCGGUGCUACAUUGUu 2 19 546 568 [ce6:X:7959588-7959610:-] 0.5276 158 7 -11.24 -0.4479 MIMAT0000313 cel-miR-258 181055 sem-5 uuuuccuaaGGAGAGUUUUGg ::||||||||| uuucacaacUUUCUCAAAACu 2 13 173 193 [ce6:X:7959963-7959983:-] 0.5025 152 7 -13.52 -0.3434 MIMAT0000324 cel-miR-268 181055 sem-5 ugguuUGACGAAGAUUAAG-AACGg | ||:||:| |||| |||| uuuucAAUGUUUUU-AUUCUUUGCa 2 20 231 254 [ce6:X:7959902-7959925:-] 0.5025 129 0 -14.05 -1.0830 MIMAT0000325 cel-miR-269 181055 sem-5 ucAAAACGGUCUCAGAACGg ||| :|: ||||||| acUUUACUCGCCGUCUUGCu 2 19 675 694 [ce6:X:7959462-7959481:-] 0.5276 150 7 -13.49 -0.5154 MIMAT0015121 cel-miR-360* 181055 sem-5 acuggcauuguugcCAGUGUu |||||| aaucacuaaaucuuGUCACAa 2 8 126 146 [ce6:X:7960010-7960030:-] 0.5025 120 6 -12.39 -0.1193 MIMAT0015240 cel-miR-788* 181055 sem-5 gcuaaGAUUA--GGUAAAGg ||| | ||||||| cauaaCUAUUUGCCAUUUCu 2 14 469 488 [ce6:X:7959668-7959687:-] 0.5276 144 7 -12.42 -0.7084 MIMAT0005031 cel-miR-1018 181055 sem-5 gacauuCAGGUUACUAGAGAGa ||| || :|||||| uuucucGUC--AUUGUCUCUCu 2 17 484 503 [ce6:X:7959653-7959672:-] 0.5276 133 6 -14.42 -0.1170 MIMAT0011425 cel-miR-2207 181055 sem-5 gaaUAUGUGUCAGAGUU-AAGUGu ||:| :|| |:|| ||||| ccaAUGCUGGGUAUUAAUUUCACa 2 21 156 179 [ce6:X:7959977-7960000:-] 0.5025 128 0 -12.85 -0.8972 MIMAT0011460 cel-miR-2219 181055 sem-5 gaagucgaaagggagcGUGAAGc |||||| ucugauauaguuuuauCACUUCa 2 8 593 615 [ce6:X:7959541-7959563:-] 0.5276 120 6 -12.10 -0.1764 MIMAT0011463 cel-miR-2221 181055 sem-5 ugaucgcCAGACCAUAGUGAAc ||:| |||||||| ugauauaGUUU--UAUCACUUc 2 16 595 614 [ce6:X:7959542-7959561:-] 0.5276 148 7 -9.52 -0.9529 MIMAT0011463 cel-miR-2221 181055 sem-5 ugaucgccagaccaUAGUGAac |||||| aaucuccaauaauaAUCACUaa 3 9 113 134 [ce6:X:7960022-7960043:-] 0.5025 120 0 -5.65 -0.1598 MIMAT0000035 cel-miR-63 181055 sem-5 aaagguugagcgaagucACAGUAu |||||| uguguucaugcaauuuuUGUCAUa 2 8 449 472 [ce6:X:7959684-7959707:-] 0.5159 120 6 -10.75 -0.1627 MIMAT0000036 cel-miR-64 181055 sem-5 aagccauugcgaagucACAGUAu |||||| guguucaugcaauuuuUGUCAUa 2 8 450 472 [ce6:X:7959684-7959706:-] 0.5159 120 6 -10.95 -0.1611 MIMAT0000037 cel-miR-65 181055 sem-5 aagcCAA-UGCG-AAGUCACAGUAu ||| |:|| |: |||||| uuguGUUCAUGCAAUUUUUGUCAUa 2 20 448 472 [ce6:X:7959684-7959708:-] 0.5159 121 6 -13.88 -0.1611 MIMAT0000038 cel-miR-66 181055 sem-5 aguGUAGGGAUUAGUCACAGUAc ||| | |||: |||||| guuCAUGC--AAUUUUUGUCAUa 2 21 452 472 [ce6:X:7959684-7959704:-] 0.5159 125 6 -9.46 -0.1642 MIMAT0000058 cel-miR-85 181055 sem-5 cgUGCUGAAAAGUUUA-UGAAACAu | | ||||| ||| |||||| ucAAGUAUUUUCCAAUCCCUUUGUa 2 23 710 734 [ce6:X:7959422-7959446:-] 0.5065 137 6 -12.74 -0.1629 MIMAT0000284 cel-miR-229 181055 sem-5 gcuaccuuuucuauuggucACAGUAa |||||| uuuguguucaugcaauuuuUGUCAUa 2 8 447 472 [ce6:X:7959684-7959709:-] 0.5159 120 6 -6.64 -0.1642 MIMAT0000302 cel-miR-246 181055 sem-5 cgaggaugggcuuUGUACAUu ||||||| uuguucguguuuuACAUGUAg 2 9 202 222 [ce6:X:7959934-7959954:-] 0.5025 140 7 -15.57 -0.7272

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score sem-5 RAID00288395 cel-miR-228-5p miRNA MIMAT0000283 sem-5 mRNA 181055 Prediction 0.2202 sem-5 RAID00587907 cel-miR-83-3p miRNA MIMAT0000056 sem-5 mRNA 181055 Prediction 0.2202 sem-5 RAID00626346 cel-miR-235-3p miRNA MIMAT0000290 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID00657541 cel-miR-66-5p miRNA MIMAT0000038 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID01475247 cel-miR-65-5p miRNA MIMAT0000037 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID02263327 cel-miR-34-5p miRNA MIMAT0000005 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID02337815 cel-miR-64-5p miRNA MIMAT0000036 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID02518342 cel-miR-86-5p miRNA MIMAT0000059 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID02671225 cel-miR-246-3p miRNA MIMAT0000302 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID02788679 cel-miR-63-3p miRNA MIMAT0000035 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID02985807 cel-miR-85-3p miRNA MIMAT0000058 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID03528249 cel-miR-229-5p miRNA MIMAT0000284 sem-5 mRNA 181055 Prediction 0.1828 sem-5 RAID03824371 cel-miR-236-3p miRNA MIMAT0000291 sem-5 mRNA 181055 Prediction 0.1828