DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015099 cel-miR-51* 171696 smg-2 acguggacauggacGAAGGUac |||||| cgcuuuaaaaaaauCUUCCAaa 3 9 154 175 [ce6:I:1189522-1189543:+] 0.5000 120 0 -9.28 -0.4419 MIMAT0015119 cel-miR-247* 171696 smg-2 ccauuaaucuuugAAAAGAGAu |||||||| uauuuuugcuugaUUUUCUCUc 2 10 235 256 [ce6:I:1189603-1189624:+] 0.5000 145 7 -7.68 -0.6863 MIMAT0005031 cel-miR-1018 171696 smg-2 gacauucagGUUACUAGAGAga || |||||| auauucgcgCAUAAAUCUCUga 3 14 205 226 [ce6:I:1189573-1189594:+] 0.5000 121 0 -7.03 -0.2121 MIMAT0005523 cel-miR-1022 171696 smg-2 cuaccGCAGGAUUGUUACUAGAa :||::| :| |||||| cccccUGUUUUCUUAUUGAUCUa 2 19 104 126 [ce6:I:1189472-1189494:+] 0.5005 126 6 -11.45 -0.1132 MIMAT0006584 cel-miR-1817 171696 smg-2 guacuaucUCUUCUGUAACCGAu :||: ||||||||| auuuuuuuGGAGCACAUUGGCUa 2 16 75 97 [ce6:I:1189443-1189465:+] 0.5009 159 7 -19.61 -0.6642 MIMAT0006587 cel-miR-1820 171696 smg-2 cuUGUAGUAGCUUUUUGUUAGUUUu | ||| || |||| ||||| | aaAAAUCUUCCAAAA--AAUCACAa 2 24 162 184 [ce6:I:1189530-1189552:+] 0.5000 136 0 -5.45 -0.1255 MIMAT0006768 cel-miR-1828 171696 smg-2 ugaUAGUGAA----UUUACGAAGGUca |||:||| ||| |||||| auaAUCGCUUUAAAAAAAUCUUCCAaa 3 21 149 175 [ce6:I:1189517-1189543:+] 0.5000 139 0 -15.13 -0.4419 MIMAT0006770 cel-miR-1829b 171696 smg-2 auguUGGUAGAUCUUCUAGCGAa :|:|| || | |||||| cuucGCUAUAUAUAUAAUCGCUu 2 20 136 158 [ce6:I:1189504-1189526:+] 0.5000 131 6 -11.82 -0.3194 MIMAT0006771 cel-miR-1829c 171696 smg-2 auGUUGGUAGAACUUAAAGCGAa | ||| | || | |||||| auCUACC-UAUUUAUCUUCGCUa 2 22 122 143 [ce6:I:1189490-1189511:+] 0.5000 127 6 -10.44 -0.4730 MIMAT0011425 cel-miR-2207 171696 smg-2 gaaUAUGUGUCAGA--GUUAAGUGu ||| |: ||| ||||||| cgcAUAAAU-CUCUGAAAAUUCACu 2 21 212 235 [ce6:I:1189580-1189603:+] 0.5000 145 7 -12.44 -1.1067 MIMAT0011438 cel-miR-2211 171696 smg-2 aaAGAGGAGAUUUAAGAUGGAcu |:||:| | :| ||||||| guUUUCUUAUUGA-UCUACCUau 3 22 110 131 [ce6:I:1189478-1189499:+] 0.5000 143 0 -14.54 -0.1185 MIMAT0011449 cel-miR-1832b* 171696 smg-2 uuucacccGGCUCGCUAAGCGac || | |||||| gacauuuuCCCAAAUAUUCGCgc 3 16 192 214 [ce6:I:1189560-1189582:+] 0.5000 123 0 -9.76 -0.1313 MIMAT0011449 cel-miR-1832b* 171696 smg-2 uuucacccggcucgcuAAGCGAc |||||| gaucuaccuauuuaucUUCGCUa 2 8 121 143 [ce6:I:1189489-1189511:+] 0.5000 120 6 -7.40 -0.4764 MIMAT0000001 cel-let-7 171696 smg-2 uuGAUAUGUUGGAU-GAUGGAgu :| | : |:: | |||||| ugUUUUCUUAUUGAUCUACCUau 3 21 109 131 [ce6:I:1189477-1189499:+] 0.5000 123 0 -8.44 -0.1197 MIMAT0000019 cel-miR-48 171696 smg-2 agcguaGAUGACUCGGAUGGAgu :||:||| :|||||| guuuucUUAUUGA-UCUACCUau 3 18 110 131 [ce6:I:1189478-1189499:+] 0.5000 139 0 -16.85 -0.1150 MIMAT0000045 cel-miR-73 171696 smg-2 ugACUUGACGGAU--GUAGAA-CGGu ||| || |||| :||||| ||: auUGAUCUACCUAUUUAUCUUCGCUa 2 22 118 143 [ce6:I:1189486-1189511:+] 0.5000 120 0 -19.56 -0.4308 MIMAT0000047 cel-miR-75 171696 smg-2 acuucggccaaccauCGAAAUu |||||| gcuauauauauaaucGCUUUAa 2 8 140 161 [ce6:I:1189508-1189529:+] 0.5000 120 6 -6.67 -0.5224 MIMAT0000051 cel-miR-79 171696 smg-2 ucgaaaccauuggauCGAAAUa |||||| gcuauauauauaaucGCUUUAa 2 8 140 161 [ce6:I:1189508-1189529:+] 0.5000 120 6 -6.44 -0.5119 MIMAT0000057 cel-miR-84 171696 smg-2 auguuAUAAUGUAUGAUGGAgu ||||: || |||||| uuucuUAUUG-AU-CUACCUau 3 18 112 131 [ce6:I:1189480-1189499:+] 0.5000 133 0 -10.58 -0.1065 MIMAT0000297 cel-miR-241 171696 smg-2 aguAAAGAGCG--UGGAUGGAgu |||||: : |:|||||| uguUUUCUUAUUGAUCUACCUau 3 19 109 131 [ce6:I:1189477-1189499:+] 0.5000 137 0 -14.36 -0.1162 MIMAT0004230 cel-miR-795 171696 smg-2 uuCGAGCGACUAGUUAGAUGGAgu |:|: || ||::|||||||| cuGUUUUCUUAUUGAUCUACCUau 3 23 108 131 [ce6:I:1189476-1189499:+] 0.5005 158 0 -16.94 -0.1154

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 smg-2; Y48G8AL.6 cel-miR-237 16 44 -UCGACA---AGCUCUU--AAGAGUCCCU :|||| |:| || || ||:||| GGGCUGGCUAUUG-GAUAUUUGUCGGGGC smg-2; Y48G8AL.6 cel-miR-354 1 19 UCCUCGUCGUUGUUUGUUCCA |||| |:: :|:||||| --GAGCC-CGGAGAGCAAGGG smg-2; Y48G8AL.6 cel-miR-357 2 29 -UGAGGA----CGUUGCUGACCG-UAAAU :| || |||| |:||||| ||| AGC-CCGGAGAGCAAGGGCUGGCUAUUG- smg-2; Y48G8AL.6 cel-miR-42 1 13 AGACAUCUACAAUUGGGCCACU- |:||||| || -----------GAGCCCGGAGAG smg-2; Y48G8AL.6 cel-miR-48 108 131 AGCGU-AG-AUGACUCGGAUGGAGU :|: || ||:||| :|||||| CUGUUUUCUUAUUGA-UCUACCUA- smg-2; Y48G8AL.6 cel-miR-73 117 145 -UGACUUGACGGAUG--UAGAA-CGGU- |:||| || ||||: ||||| ||:| UAUUGAUCUACCUAUUUAUCUUCGCUAU smg-2; Y48G8AL.6 cel-miR-786 24 45 -UAACUUGUAGUAAGUCCCGUAAU ||||:|:||: ||:|||| UAUUGGAUAUUUGUCGGGGCU--- smg-2; Y48G8AL.6 cel-miR-788 11 56 GACGUUU----------ACCU----------UC-AAUCUUCGCCU ||||: |||| :| ||:|||| ||| -AGCAAGGGCUGGCUAUUGGAUAUUUGUCGGGGCUUGGAAGAGGAG smg-2; Y48G8AL.6 cel-miR-795 109 131 UUCGAGCGACUAGUUAGAUGGAGU |:|: || ||::|||||||| -UGUUUUCUUAUUGAUCUACCUA- smg-2; Y48G8AL.6 cel-miR-237 21 43 uCGACAAGCUCUUAAGAGUCCCu ||| || || | || ||:||| gGCTATTGGATATTTGTCGGGGc smg-2; Y48G8AL.6 cel-miR-357 6 29 ugaggaCGUUGCUGACCG-UAAau |||| |:||||| ||| cggagaGCAAGGGCTGGCTATTgg smg-2; Y48G8AL.6 cel-miR-48 109 131 agcguAG-AUGACUCGGAUGGAgu || ||:||| :|||||| tgtttTCTTATTGA-TCTACCTat smg-2; Y48G8AL.6 cel-miR-73 118 143 UGACUUGACGGAU--GUAGAA-CGGU |:||| || |||| :||||| ||:| ATTGATCTACCTATTTATCTTCGCTA smg-2; Y48G8AL.6 cel-miR-786 25 47 UAACUUGUAGUAAGUCCCGUAau ||||:|:||: ||:|||| | ATTGGATATTTGTCGGGGCTTgg smg-2; Y48G8AL.6 cel-miR-788 31 54 gacguuuaCCUUCAAUCUUCGCCU ||:: ||:|||| ||| tatttgtcGGGGCTTGGAAGAGGA smg-2; Y48G8AL.6 cel-miR-795 108 131 uuCGAGCGACUAGUUAGAUGGAgu |:|: || ||::|||||||| ctGTTTTCTTATTGATCTACCTat

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score smg-2 RAID00090197 cel-miR-75-3p miRNA MIMAT0000047 smg-2 mRNA 171696 Prediction 0.1828 smg-2 RAID00978485 cel-miR-84-5p miRNA MIMAT0000057 smg-2 mRNA 171696 Prediction 0.1828 smg-2 RAID01258410 cel-let-7-5p miRNA MIMAT0000001 smg-2 mRNA 171696 Prediction 0.1828 smg-2 RAID01757875 cel-miR-73-3p miRNA MIMAT0000045 smg-2 mRNA 171696 Prediction 0.1828 smg-2 RAID01939135 cel-miR-48-5p miRNA MIMAT0000019 smg-2 mRNA 171696 Prediction 0.1828 smg-2 RAID02518371 cel-miR-241-5p miRNA MIMAT0000297 smg-2 mRNA 171696 Prediction 0.1828 smg-2 RAID03109101 cel-miR-79-3p miRNA MIMAT0000051 smg-2 mRNA 171696 Prediction 0.1828 smg-2 RAID03621639 cel-miR-795-5p miRNA MIMAT0004230 smg-2 mRNA 171696 Prediction 0.1828