DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015095 cel-miR-42* 266820 smo-1 gaAGUGGCUUUUUCGUUUGUGGGUg | |:| :|||| |||||||||| ucUAAUCCGAAAA-CAAACACCCAu 2 24 15 38 [ce6:I:1341100-1341123:+] 0.5727 177 7 -28.28 -0.9982 MIMAT0015095 cel-miR-42* 266820 smo-1 gaaguGGCUU--UUUCGUUUGUGGGUg :|||| | | :| ||| ||| acauuUCGAAUCAUAUUAUACAACCAa 2 21 94 120 [ce6:I:1341179-1341205:+] 0.5553 123 0 -10.97 -0.2443 MIMAT0015095 cel-miR-42* 266820 smo-1 gaAGUGGCUUUUUCGUUUGUGGGUg | |:| :|||| |||||||||| ucUAAUCCGAAAA-CAAACACCCAu 2 24 15 38 [ce6:I:1341100-1341123:+] 0.5727 177 7 -28.28 -0.9972 MIMAT0015095 cel-miR-42* 266820 smo-1 gaaguGGCUU--UUUCGUUUGUGGGUg :|||| | | :| ||| ||| acauuUCGAAUCAUAUUAUACAACCAa 2 21 94 120 [ce6:I:1341179-1341205:+] 0.5553 123 0 -10.97 -0.2413 MIMAT0015109 cel-miR-81* 266820 smo-1 agagucuagugccaCUUUUGgc |||||| cuacacucuaauccGAAAACaa 3 9 9 30 [ce6:I:1341094-1341115:+] 0.6616 120 0 -11.26 -0.3316 MIMAT0015109 cel-miR-81* 266820 smo-1 agagucuagugccaCUUUUGgc |||||| cuacacucuaauccGAAAACaa 3 9 9 30 [ce6:I:1341094-1341115:+] 0.6616 120 0 -11.26 -0.4801 MIMAT0015115 cel-miR-239b* 266820 smo-1 aaaAACGUG-UGGUGUUUUCAcg || :|| |||| |||||| auaUUAUACAACCAAAAAAGUuu 3 20 106 128 [ce6:I:1341191-1341213:+] 0.5553 146 0 -11.44 -0.2423 MIMAT0015115 cel-miR-239b* 266820 smo-1 aaaAACGUG-UGGUGUUUUCAcg || :|| |||| |||||| auaUUAUACAACCAAAAAAGUuu 3 20 106 128 [ce6:I:1341191-1341213:+] 0.5553 146 0 -11.44 -0.2417 MIMAT0015119 cel-miR-247* 266820 smo-1 ccaUUAAUCUUUGA---AAAGAGAu | | ||| ||| ||||||| uccACUGAGAUACUCGGUUUCUCUg 2 20 49 73 [ce6:I:1341134-1341158:+] 0.5195 154 7 -13.47 -0.3499 MIMAT0015119 cel-miR-247* 266820 smo-1 ccaUUAAUCUUUGA---AAAGAGAu | | ||| ||| ||||||| uccACUGAGAUACUCGGUUUCUCUg 2 20 49 73 [ce6:I:1341134-1341158:+] 0.5195 154 7 -13.47 -0.3488 MIMAT0000316 cel-miR-261 266820 smo-1 gcacuUUUGAUUUUUCGAu || | ||||||:| uauacAACCAAAAAAGUUu 2 15 110 128 [ce6:I:1341195-1341213:+] 0.5553 138 0 -5.55 -0.1013 MIMAT0000316 cel-miR-261 266820 smo-1 gcacuUUUGAUUUUUCGAu || | ||||||:| uauacAACCAAAAAAGUUu 2 15 110 128 [ce6:I:1341195-1341213:+] 0.5553 138 0 -5.55 -0.1010 MIMAT0015240 cel-miR-788* 266820 smo-1 gcuaagauuagGUAAAGg |||||| ucuauuuuccaCAUUUCg 2 8 84 101 [ce6:I:1341169-1341186:+] 0.5553 120 6 -8.22 -0.1707 MIMAT0015240 cel-miR-788* 266820 smo-1 gcuaagauuagGUAAAGg |||||| ucuauuuuccaCAUUUCg 2 8 84 101 [ce6:I:1341169-1341186:+] 0.5553 120 6 -8.22 -0.1701 MIMAT0006587 cel-miR-1820 266820 smo-1 cuugUAGUAGCUUUUUGUUAGUUUu ||||| | |||| |||| ucgaAUCAU-AUUAUACAACCAAAa 2 22 99 122 [ce6:I:1341184-1341207:+] 0.5553 127 0 -10.91 -0.1481 MIMAT0006587 cel-miR-1820 266820 smo-1 cuugUAGUAGCUUUUUGUUAGUUUu ||||| | |||| |||| ucgaAUCAU-AUUAUACAACCAAAa 2 22 99 122 [ce6:I:1341184-1341207:+] 0.5553 127 0 -10.91 -0.1483 MIMAT0011427 cel-miR-2208a 266820 smo-1 ccuauagucuaagcccAUGUGAa |||||| -------uccucuaccUACACUc 2 8 1 16 [ce6:I:1341086-1341101:+] 0.6616 120 6 -5.08 -0.4893 MIMAT0011427 cel-miR-2208a 266820 smo-1 ccuauagucuaagcccAUGUGAa |||||| -------uccucuaccUACACUc 2 8 1 16 [ce6:I:1341086-1341101:+] 0.6616 120 6 -5.08 -0.6166 MIMAT0011429 cel-miR-2208b-5p 266820 smo-1 ccuauagucuaggcccAUGUGAa |||||| -------uccucuaccUACACUc 2 8 1 16 [ce6:I:1341086-1341101:+] 0.6616 120 6 -7.66 -0.4893 MIMAT0011429 cel-miR-2208b-5p 266820 smo-1 ccuauagucuaggcccAUGUGAa |||||| -------uccucuaccUACACUc 2 8 1 16 [ce6:I:1341086-1341101:+] 0.6616 120 6 -7.66 -0.6166 MIMAT0011431 cel-miR-2209a* 266820 smo-1 cuuccucuucucaccaAUGUGAg |||||| -------uccucuaccUACACUc 2 8 1 16 [ce6:I:1341086-1341101:+] 0.6616 120 6 -8.74 -0.4928 MIMAT0011431 cel-miR-2209a* 266820 smo-1 cuuccucuucucaccaAUGUGAg |||||| -------uccucuaccUACACUc 2 8 1 16 [ce6:I:1341086-1341101:+] 0.6616 120 6 -8.74 -0.6203 MIMAT0011433 cel-miR-2209c* 266820 smo-1 uuuguucugcacgccaAUGUGAg |||||| -------uccucuaccUACACUc 2 8 1 16 [ce6:I:1341086-1341101:+] 0.6616 120 6 -8.74 -0.4859 MIMAT0011433 cel-miR-2209c* 266820 smo-1 uuuguucugcacgccaAUGUGAg |||||| -------uccucuaccUACACUc 2 8 1 16 [ce6:I:1341086-1341101:+] 0.6616 120 6 -8.74 -0.6129 MIMAT0011451 cel-miR-2217* 266820 smo-1 cuagcuguggcugacggGUGAGAc |||||| ------uccucuaccuaCACUCUa 2 8 1 18 [ce6:I:1341086-1341103:+] 0.6616 120 6 -12.94 -0.2918 MIMAT0011451 cel-miR-2217* 266820 smo-1 cuagcuguggcugacggGUGAGAc |||||| ------uccucuaccuaCACUCUa 2 8 1 18 [ce6:I:1341086-1341103:+] 0.6616 120 6 -12.94 -0.4014 MIMAT0011458 cel-miR-2218b* 266820 smo-1 agAGUGAUGUUUGAUGUUUAaa |:|:| :| :||||||| acUUAUU-UAUCUUACAAAUaa 3 21 135 155 [ce6:I:1341220-1341240:+] 0.5553 134 0 -11.63 -0.1886 MIMAT0011458 cel-miR-2218b* 266820 smo-1 agAGUGAUGUUUGAUGUUUAaa |:|:| :| :||||||| acUUAUU-UAUCUUACAAAUaa 3 21 135 155 [ce6:I:1341220-1341240:+] 0.5553 134 0 -11.63 -0.2484 MIMAT0000300 cel-miR-244 266820 smo-1 guaUGGUGAAACAUGUUGGUUUcu |:||: || |||||||||| cgaAUCAUAUUAUACAACCAAAaa 3 22 100 123 [ce6:I:1341185-1341208:+] 0.5553 161 0 -16.84 -0.3824 MIMAT0000300 cel-miR-244 266820 smo-1 guaUGGUGAAACAUGUUGGUUUcu |:||: || |||||||||| cgaAUCAUAUUAUACAACCAAAaa 3 22 100 123 [ce6:I:1341185-1341208:+] 0.5553 161 0 -16.84 -0.3833 MIMAT0000697 cel-miR-355 266820 smo-1 guaucGAGUCCGAUUUUGUUu || | | ||||||| acacuCUAAUCCGAAAACAAa 2 17 11 31 [ce6:I:1341096-1341116:+] 0.6616 148 7 -9.66 -1.2898 MIMAT0000697 cel-miR-355 266820 smo-1 guaucGAGUCCGAUUUUGUUu || | | ||||||| acacuCUAAUCCGAAAACAAa 2 17 11 31 [ce6:I:1341096-1341116:+] 0.6616 148 7 -9.66 -1.3435 MIMAT0000749 cel-lsy-6 266820 smo-1 gcUUUACGCAGAGUAUGUUuu :||| | | |:|||||| ucGAAU-CAUAUUAUACAAcc 3 20 99 118 [ce6:I:1341184-1341203:+] 0.5553 137 0 -9.64 -0.4122 MIMAT0000749 cel-lsy-6 266820 smo-1 gcuuuacgcagaguAUGUUUu |||||| uaacuuauuuaucuUACAAAu 2 8 133 153 [ce6:I:1341218-1341238:+] 0.5553 120 6 -6.04 -0.2142 MIMAT0000749 cel-lsy-6 266820 smo-1 gcUUUACGCAGAGUAUGUUuu :||| | | |:|||||| ucGAAU-CAUAUUAUACAAcc 3 20 99 118 [ce6:I:1341184-1341203:+] 0.5553 137 0 -9.64 -0.4107 MIMAT0000749 cel-lsy-6 266820 smo-1 gcuuuacgcagaguAUGUUUu |||||| uaacuuauuuaucuUACAAAu 2 8 133 153 [ce6:I:1341218-1341238:+] 0.5553 120 6 -6.04 -0.1410

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score smo-1 RAID00349783 cel-lsy-6-3p miRNA MIMAT0000749 smo-1 mRNA 266820 Prediction 0.1828 smo-1 RAID00440450 cel-miR-244-5p miRNA MIMAT0000300 smo-1 mRNA 266820 Prediction 0.1828 smo-1 RAID01454941 cel-miR-355-5p miRNA MIMAT0000697 smo-1 mRNA 266820 Prediction 0.1828