DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015102 cel-miR-60* 172209 tom-1 uaAAAUACCGUGAG----AAGGUCAa ||| | |: ||| ||||||| ugUUUCUUGUCCUCUAAUUUCCAGUc 2 21 107 132 [ce6:I:5561412-5561437:+] 0.5150 151 7 -14.03 -0.9043 MIMAT0015114 cel-miR-238* 172209 tom-1 cgaAACUUGC-AGGCUCUUGUAGGu || ||:| |:: | |||||| uuaUUAAAUGUUUUCAAUACAUCCu 2 22 164 188 [ce6:I:5561469-5561493:+] 0.5418 128 6 -12.87 -0.1516 MIMAT0015116 cel-miR-240* 172209 tom-1 guaagAUCAGAGU--UUUAGGAGc |: |:||| | |||||| uuaaaUGUUUUCAAUACAUCCUCa 2 18 167 190 [ce6:I:5561472-5561495:+] 0.5418 124 6 -12.39 -0.5116 MIMAT0015241 cel-miR-797* 172209 tom-1 uaAAGUGUCUU-UGGUUACUUUu ||:| | || | :|||||| gaUUUAGAUAAUAAAGAUGAAAu 2 21 313 335 [ce6:I:5561618-5561640:+] 0.5209 139 6 -7.51 -0.1044 MIMAT0015241 cel-miR-797* 172209 tom-1 uaaagugucuuugguUACUUUu |||||| uuuucuuguuggguuAUGAAAa 2 8 264 285 [ce6:I:5561569-5561590:+] 0.5418 120 6 -7.54 -0.1056 MIMAT0005033 cel-miR-1020 172209 tom-1 gacuuucacaguguCUUAUUa |||||| auaaucaaucugccGAAUAAu 2 8 239 259 [ce6:I:5561544-5561564:+] 0.5418 120 6 -6.03 -0.1042 MIMAT0006590 cel-miR-1823 172209 tom-1 aaugAGGAUUUGUGAAGGUCAu |||| | |:||||||| cuugUCCUCUA-AUUUCCAGUc 2 19 112 132 [ce6:I:5561417-5561437:+] 0.5418 156 7 -17.31 -0.9379 MIMAT0011430 cel-miR-2208b-3p 172209 tom-1 acuUCACAUGGU-UUUAGACGua | | ||: | ||||||| uuuAUUUUAUAAUCAAUCUGCcg 3 20 231 253 [ce6:I:5561536-5561558:+] 0.5418 130 0 -8.77 -0.1215 MIMAT0011430 cel-miR-2208b-3p 172209 tom-1 acuucacaugguuuUAGACGUa |||||:| uuuuuuaguuuuguAUCUGUAg 2 9 10 31 [ce6:I:5561315-5561336:+] 0.5904 124 0 -7.50 -0.1828 MIMAT0011435 cel-miR-2210 172209 tom-1 ggauuuuuaACUAACUAGACGGa | || ||||||| uuuauuuuaUAAUCAAUCUGCCg 2 15 231 253 [ce6:I:5561536-5561558:+] 0.5418 146 7 -10.37 -1.0139 MIMAT0011439 cel-miR-2212 172209 tom-1 guuucAGUCGGAUA----CUAGACGGu |:| ::||| ||||||| gguuuUUAUUUUAUAAUCAAUCUGCCg 2 19 227 253 [ce6:I:5561532-5561558:+] 0.5418 141 7 -13.12 -1.0167 MIMAT0011447 cel-miR-2216 172209 tom-1 cgGAUGGCUGA-AUUUUACAcg :|: : |:| | |||||| ggUUGAUUAUUAUUAAAUGUuu 3 20 155 176 [ce6:I:5561460-5561481:+] 0.5418 126 0 -6.41 -0.1686 MIMAT0011448 cel-miR-2216* 172209 tom-1 uccGUGUAAAAUUCAUCUAuc :::| ||| :|||||| aucUGUAGUUUUGGUAGAUuu 3 19 24 44 [ce6:I:5561329-5561349:+] 0.5904 138 0 -10.07 -0.1421 MIMAT0011448 cel-miR-2216* 172209 tom-1 uccguguaaaauucAUCUAUc |||||| acuuuuuggagauuUAGAUAa 2 8 303 323 [ce6:I:5561608-5561628:+] 0.5418 120 6 -4.44 -0.2058 MIMAT0011455 cel-miR-2218a 172209 tom-1 acucCGAAUUUUGAACAUCAAAc |:|| : |: |||||||| uuuaGUUUUGUAUCUGUAGUUUu 2 20 13 35 [ce6:I:5561318-5561340:+] 0.5904 159 7 -10.64 -0.8212 MIMAT0011455 cel-miR-2218a 172209 tom-1 acuccgaauuUUGAACAUCAAAc | :|| |||||| --uuuccgucAUUUUUUAGUUUu 2 14 1 21 [ce6:I:5561306-5561326:+] 0.6926 121 6 -2.97 -0.1305 MIMAT0000021 cel-miR-50 172209 tom-1 ggguUCUUAUGGUC-UGUAUAGu ||| | :: | ||||||: ugguAGAUUUUUUGUACAUAUUa 2 19 35 57 [ce6:I:5561340-5561362:+] 0.4882 133 0 -8.85 -0.3555 MIMAT0000034 cel-miR-62 172209 tom-1 gaCAUUCGAUCUA-AUGUAUAGu |||: :| | |||||||: ugGUAGAUUUUUUGUACAUAUUa 2 21 35 57 [ce6:I:5561340-5561362:+] 0.4882 135 0 -12.88 -0.3612 MIMAT0000061 cel-miR-90 172209 tom-1 uccccgUAAGUUUGUUGUAUAGu |||: ||||||: ugguagAUUUUUUGUACAUAUUa 2 18 35 57 [ce6:I:5561340-5561362:+] 0.4882 125 0 -10.26 -0.3555 MIMAT0000314 cel-miR-259 172209 tom-1 acgauggucuaauccuaCUCUAAa |||||| gcuucauugacuuuuugGAGAUUu 2 8 294 317 [ce6:I:5561599-5561622:+] 0.5418 120 6 -9.98 -0.1249

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score tom-1 RAID00502242 cel-miR-259-5p miRNA MIMAT0000314 tom-1 mRNA 172209 Prediction 0.1828 tom-1 RAID01204029 cel-miR-50-5p miRNA MIMAT0000021 tom-1 mRNA 172209 Prediction 0.1828 tom-1 RAID01631285 cel-miR-90-3p miRNA MIMAT0000061 tom-1 mRNA 172209 Prediction 0.1828 tom-1 RAID01911742 cel-miR-62 miRNA MIMAT0000034 tom-1 mRNA 172209 Prediction 0.1828