DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015108 cel-miR-75* 171734 ubc-3 aaauucgaacguuGGCUGAc |||||| aaaucuucaaaauCCGACUc 2 8 128 147 [ce6:I:1700916-1700935:+] 0.5206 120 6 -11.98 -0.1320 MIMAT0015119 cel-miR-247* 171734 ubc-3 ccauuaaucuuUGAAAAGAGau | ||||||| uuuuuuuucucAAUUUUCUCaa 3 12 36 57 [ce6:I:1700824-1700845:+] 0.5206 127 0 -6.47 -0.3146 MIMAT0015119 cel-miR-247* 171734 ubc-3 ccAUUAAUCUUUGAAAAG-AGAu || | | | :||||| ||| uaUACUCAAUAUUUUUUCGUCUg 2 21 222 244 [ce6:I:1701010-1701032:+] 0.4041 120 0 -6.85 -0.8493 MIMAT0000698 cel-miR-356 171734 ubc-3 acuAAACAAGCG--CAACGAGUu ||| ||| | || |||| auuUUUUUUCUCAAUUUUCUCAa 2 19 35 57 [ce6:I:1700823-1700845:+] 0.5206 121 0 -5.06 -0.1125 MIMAT0015240 cel-miR-788* 171734 ubc-3 gcuAAGAUUAGGUAAAGg ||:| ||||||: aauUUUUUCCCCAUUUUu 2 16 23 40 [ce6:I:1700811-1700828:+] 0.5206 131 0 -8.15 -0.1078 MIMAT0005032 cel-miR-1019 171734 ubc-3 gaccuuucguuACACCUUAAUGUc ||| ||||||| acaguuuuuuuUGUCCAAUUACAc 2 14 248 271 [ce6:I:1701036-1701059:+] 0.4041 149 7 -6.66 -0.1931 MIMAT0011425 cel-miR-2207 171734 ubc-3 gaAUAUGUGUCAGAGUUAAGUGu || | | | || ||||||: ccUAGAAAAAUUC-AAAUUCAUa 2 22 66 87 [ce6:I:1700854-1700875:+] 0.5206 135 0 -9.11 -0.1518 MIMAT0011427 cel-miR-2208a 171734 ubc-3 ccUAUAGUCUAAGCCCAUGUGAa ||: || | : ||||||| caAUG-CAUUUAUAUGUACACUu 2 22 163 184 [ce6:I:1700951-1700972:+] 0.4041 143 7 -9.92 -0.8284 MIMAT0011429 cel-miR-2208b-5p 171734 ubc-3 ccUAUAGUCUAGGCCCAUGUGAa ||: || | : ||||||| caAUG-CAUUUAUAUGUACACUu 2 22 163 184 [ce6:I:1700951-1700972:+] 0.4041 143 7 -12.21 -0.8284 MIMAT0011458 cel-miR-2218b* 171734 ubc-3 agaguGAU-GUUUGAUGUUUAAa ||| ||| | |||||| ccaacCUAGAAAAAUUCAAAUUc 2 18 62 84 [ce6:I:1700850-1700872:+] 0.5206 128 6 -8.26 -0.1874 MIMAT0000021 cel-miR-50 171734 ubc-3 gggUUCUUAUG-GUCUGUAUAGu || ||| | | |||||| uagAAAAAUUCAAAUUCAUAUCa 2 20 68 90 [ce6:I:1700856-1700878:+] 0.5206 122 6 -11.30 -0.3637 MIMAT0000034 cel-miR-62 171734 ubc-3 gacaUUCGAUCUAAUGUAUAGu || :| | | |||||| agaaAAAUUCAAAUUCAUAUCa 2 19 69 90 [ce6:I:1700857-1700878:+] 0.5206 122 6 -7.79 -0.3725 MIMAT0000061 cel-miR-90 171734 ubc-3 uccccgUAAGUUUGUUGUAUAGu |||||||: |||||| agaaaaAUUCAAAU-UCAUAUCa 2 18 69 90 [ce6:I:1700857-1700878:+] 0.5206 135 6 -15.61 -0.3334 MIMAT0000287 cel-miR-232 171734 ubc-3 aguggcgucaauucUACGUAAAu |||||||| uaguccuuuucucaAUGCAUUUa 2 10 151 173 [ce6:I:1700939-1700961:+] 0.4041 145 7 -9.64 -1.0413 MIMAT0000697 cel-miR-355 171734 ubc-3 guaucgaguccgauUUUGUUu |||||| uuggcgcuucuuucAAACAAa 2 8 107 127 [ce6:I:1700895-1700915:+] 0.5206 120 6 -7.74 -0.2609 MIMAT0000749 cel-lsy-6 171734 ubc-3 gcUUUACG-CAGAGUAU-GUUUu |||| | :||||| |||| aaAAAUUCAAAUUCAUAUCAAAu 2 20 71 93 [ce6:I:1700859-1700881:+] 0.5206 122 0 -8.46 -1.0894

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ubc-3 RAID00925964 cel-lsy-6-3p miRNA MIMAT0000749 ubc-3 mRNA 171734 CLIP-seq//Prediction 0.6308 ubc-3 RAID01160750 cel-miR-232-3p miRNA MIMAT0000287 ubc-3 mRNA 171734 CLIP-seq//Prediction 0.6478 ubc-3 RAID02041790 cel-miR-355-5p miRNA MIMAT0000697 ubc-3 mRNA 171734 CLIP-seq//Prediction 0.6308 ubc-3 RAID02337351 cel-miR-50-5p miRNA MIMAT0000021 ubc-3 mRNA 171734 CLIP-seq//Prediction 0.6478 ubc-3 RAID02733214 cel-miR-90-3p miRNA MIMAT0000061 ubc-3 mRNA 171734 CLIP-seq//Prediction 0.6559 ubc-3 RAID03056276 cel-miR-62 miRNA MIMAT0000034 ubc-3 mRNA 171734 CLIP-seq//Prediction 0.6478