DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015096 cel-miR-46* 174217 ubc-6 gaCAGUUAUCUGCCGAGAGAa ||:| | :|||||||| caGUUAUUUCUUGGCUCUCUc 2 20 75 95 [ce6:II:7480518-7480538:+] 0.5289 155 7 -19.55 -0.5631 MIMAT0015097 cel-miR-47* 174217 ubc-6 ugaCAGUUAUCUGACGAGAGAa ||:| | : ||||||| ccaGUUAUUUCUUGGCUCUCUc 2 20 74 95 [ce6:II:7480517-7480538:+] 0.5289 147 7 -14.11 -0.5631 MIMAT0015104 cel-miR-63* 174217 ubc-6 acugauggcugcUCAAUCu |||||| cucucuccucucAGUUAGu 2 8 89 107 [ce6:II:7480532-7480550:+] 0.5289 120 6 -9.18 -0.1248 MIMAT0015105 cel-miR-64* 174217 ubc-6 cgUACGGUGA-CUA--GCAACGUg || ::|:| || |||||:| uaAUAUUAUUCAAUCCCGUUGUAc 2 20 10 33 [ce6:II:7480453-7480476:+] 0.5289 129 0 -13.27 -0.1040 MIMAT0015240 cel-miR-788* 174217 ubc-6 gcuAAGAUUAGGUAAAGg ||:| |||||||: uacUUUU--UCCAUUUUc 2 16 31 46 [ce6:II:7480474-7480489:+] 0.5289 132 0 -12.99 -0.1837 MIMAT0015241 cel-miR-797* 174217 ubc-6 uaaaguGUCUUUGGUUACUUUu :||| |:||||||| aguauuUAGAUUCUAAUGAAAu 2 17 105 126 [ce6:II:7480548-7480569:+] 0.5147 156 7 -13.20 -1.1287 MIMAT0006587 cel-miR-1820 174217 ubc-6 cuuGUAGUAGCUUUUUGUUAGUUUu |||: || || ||||||| uucCAUUUUCUAA----AAUCAAAc 2 23 37 57 [ce6:II:7480480-7480500:+] 0.5289 149 7 -5.37 -0.9454 MIMAT0006590 cel-miR-1823 174217 ubc-6 aaUGAGG-A--UUUGUGAA-GGUCAu |||:| | || ||||| ||||| aaACUUCGUGCAAUCACUUGCCAGUu 2 21 54 79 [ce6:II:7480497-7480522:+] 0.5289 130 0 -19.26 -0.8026 MIMAT0011463 cel-miR-2221 174217 ubc-6 ugaucgccAG-ACCAUAGUGAAc || || ||||||| aucaaacuUCGUGCAAUCACUUg 2 15 51 73 [ce6:II:7480494-7480516:+] 0.5289 145 7 -13.45 -0.6536 MIMAT0000043 cel-miR-71 174217 ubc-6 agugauggguacAGAAAGu |||||| aauauuugaguaUCUUUCu 2 8 135 153 [ce6:II:7480578-7480596:+] 0.5005 120 6 -6.85 -0.1242 MIMAT0000290 cel-miR-235 174217 ubc-6 aguccggccccucuCACGUUAu ||||||| uaaaaucaaacuucGUGCAAUc 2 9 47 68 [ce6:II:7480490-7480511:+] 0.5289 140 7 -6.81 -0.6355 MIMAT0000291 cel-miR-236 174217 ubc-6 ucGCA-G-UAAUGGACUGUC-AUAAu ||| | || ||:|| ||| |||| uuCGUGCAAUCACUUGCCAGUUAUUu 2 22 58 83 [ce6:II:7480501-7480526:+] 0.5289 131 0 -14.79 -0.4161 MIMAT0000302 cel-miR-246 174217 ubc-6 cgaggaugggcUUUGUACAUu | ||||||| -----------AUACAUGUAu 2 11 1 10 [ce6:II:7480444-7480453:+] 0.5289 142 7 -6.97 -1.1412 MIMAT0004216 cel-miR-255 174217 ubc-6 gacauuuuuuagagaAGUCAAa |||||| cuuggcucucuccucUCAGUUa 2 8 84 105 [ce6:II:7480527-7480548:+] 0.5289 120 6 -10.63 -0.1415

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ubc-6 RAID00196924 cel-miR-266 miRNA MIMAT0000322 ubc-6 mRNA 174217 CLIP-seq 0.5483 ubc-6 RAID00306693 cel-miR-74-3p miRNA MIMAT0000046 ubc-6 mRNA 174217 CLIP-seq//Prediction 0.6308 ubc-6 RAID00802397 cel-miR-235-3p miRNA MIMAT0000290 ubc-6 mRNA 174217 CLIP-seq//Prediction 0.6559 ubc-6 RAID01127187 cel-miR-73-3p miRNA MIMAT0000045 ubc-6 mRNA 174217 CLIP-seq//Prediction 0.6308 ubc-6 RAID02395583 cel-miR-72-5p miRNA MIMAT0000044 ubc-6 mRNA 174217 CLIP-seq 0.5483 ubc-6 RAID02715975 cel-miR-86-5p miRNA MIMAT0000059 ubc-6 mRNA 174217 Prediction 0.1828 ubc-6 RAID02817993 cel-miR-255-3p miRNA MIMAT0004216 ubc-6 mRNA 174217 CLIP-seq//Prediction 0.6308 ubc-6 RAID02875501 cel-miR-246-3p miRNA MIMAT0000302 ubc-6 mRNA 174217 Prediction 0.1828 ubc-6 RAID03230053 cel-miR-71-5p miRNA MIMAT0000043 ubc-6 mRNA 174217 CLIP-seq//Prediction 0.6308 ubc-6 RAID04016964 cel-miR-236-3p miRNA MIMAT0000291 ubc-6 mRNA 174217 CLIP-seq//Prediction 0.6308