DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015101 cel-miR-59* 172941 ubc-25 aaggcAAAGCAAAAGUC-CUGCu |||: || ||| |||| guauuUUUUCUUCACAGUGACGa 2 18 81 103 [ce6:I:10564423-10564445:+] 0.4451 121 0 -13.12 -0.9835 MIMAT0000311 cel-miR-256 172941 ubc-25 augucagaagaUACGUAAGGu | ||||||| ccaagaaacgaACGCAUUCCc 2 11 366 386 [ce6:I:10564708-10564728:+] 0.4696 142 7 -9.87 -0.3844 MIMAT0000320 cel-miR-264 172941 ubc-25 guauuGUUGUUGGUGGGCGg || : :||||||| ucaucCAUUCUUCACCCGCu 2 16 212 231 [ce6:I:10564554-10564573:+] 0.4449 143 7 -19.35 -0.8137 MIMAT0004228 cel-miR-793 172941 ubc-25 agacAGAUUGAUUCUAUGGAGu || ||:|| ||||||| cccuUCCAAUUA--AUACCUCc 2 19 264 283 [ce6:I:10564606-10564625:+] 0.4571 155 7 -11.77 -0.9120 MIMAT0004235 cel-miR-800 172941 ubc-25 gccGUCUGUUAAAGGCUCAAAc | || ||||| ||||||| cauCUGA-AAUUU-CGAGUUUc 2 20 314 333 [ce6:I:10564656-10564675:+] 0.4696 159 7 -12.42 -0.4595 MIMAT0005522 cel-miR-1021 172941 ubc-25 ggcuccUAAAGUGU---ACUAGAGUGAa :|| |||| | ||||||| uuuuauGUUCCACACCCUCCUCUCACUu 2 20 37 64 [ce6:I:10564379-10564406:+] 0.4451 150 7 -13.52 -0.3630 MIMAT0006585 cel-miR-1818 172941 ubc-25 uuUUAGUA-CCGUACUUCUGGUGu |: |:| | | |||||||| ccAGACGUCUGAACUAAGACCACu 2 22 443 466 [ce6:I:10564785-10564808:+] 0.4696 148 7 -14.37 -0.7028 MIMAT0006586 cel-miR-1819 172941 ubc-25 agguAGUUCGAGUUAGUAAGGu |||| ||: ||||||| uuuuUCAAACUU--UCAUUCCg 2 19 144 163 [ce6:I:10564486-10564505:+] 0.4451 155 7 -14.35 -0.4494 MIMAT0006769 cel-miR-1829a 172941 ubc-25 uuaucucuuuAAGGUUACCAAc ||:|||||||| acgauuuuuuUUUCAAUGGUUu 2 13 100 121 [ce6:I:10564442-10564463:+] 0.4451 156 7 -11.85 -0.9042 MIMAT0006771 cel-miR-1829c 172941 ubc-25 auGUUGGUAGA-ACU--UAAAGCGAa || || || | | ||||||| caCACCCUCCUCUCACUUUUUCGCUc 2 22 47 72 [ce6:I:10564389-10564414:+] 0.4451 143 7 -14.11 -0.5250 MIMAT0006772 cel-miR-1830 172941 ubc-25 cggaucUUUUGCACUUUGGAGc | ||:|| ||||||| uuuuuuACAAUGU-AAACCUCa 2 17 475 495 [ce6:I:10564817-10564837:+] 0.4696 154 7 -12.67 -1.0994 MIMAT0011437 cel-miR-2211* 172941 ubc-25 gcagucuaccucuuauCUACCUCc ||||||| auuucgaguuucacgcGAUGGAGu 2 9 322 345 [ce6:I:10564664-10564687:+] 0.4696 140 7 -13.92 -0.1255 MIMAT0000034 cel-miR-62 172941 ubc-25 gacauucGAUCU---AAUGUA-UAGu ||||| |||||| ||| ucauuuuCUAGACAUUUACAUCAUCc 2 16 192 217 [ce6:I:10564534-10564559:+] 0.4451 122 0 -10.85 -0.9673 MIMAT0004216 cel-miR-255 172941 ubc-25 gaCAUUUUUUAGA----GAAG-UCAAa ||||| |||| :||| |||| guGUAAAUCAUCUGAAAUUUCGAGUUu 2 21 306 332 [ce6:I:10564648-10564674:+] 0.4696 123 0 -14.16 -0.3552 MIMAT0000700 cel-miR-358 172941 ubc-25 cuGGAACUGUCCCUAUGGUUa |||| | ||||||| uuCCUU-UCUCCUAUACCAAa 2 20 417 436 [ce6:I:10564759-10564778:+] 0.4696 141 7 -10.95 -0.8268

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ubc-25 RAID00791096 cel-miR-62 miRNA MIMAT0000034 ubc-25 mRNA 172941 CLIP-seq//Prediction 0.6308 ubc-25 RAID01796656 cel-miR-255-3p miRNA MIMAT0004216 ubc-25 mRNA 172941 CLIP-seq//Prediction 0.6308 ubc-25 RAID02963402 cel-miR-358-3p miRNA MIMAT0000700 ubc-25 mRNA 172941 Prediction 0.1828 ubc-25 RAID03154947 cel-miR-265 miRNA MIMAT0000321 ubc-25 mRNA 172941 CLIP-seq 0.5483