DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000004 cel-miR-2 179039 ubh-1 cguguaguuucgaCCGACACUAu | ||||||| auucucgcuuuacGCCUGUGAUu 2 11 28 50 [ce6:V:6509963-6509985:-] 0.5703 142 7 -11.92 -0.7649 MIMAT0000014 cel-miR-43 179039 ubh-1 cgcugucguucauuuGACACUAu ||||||| auucucgcuuuacgcCUGUGAUu 2 9 28 50 [ce6:V:6509963-6509985:-] 0.5703 140 7 -10.38 -0.7686 MIMAT0000305 cel-miR-249 179039 ubh-1 ccguugcgaguuuucaGGACACu |||||| ugauucucgcuuuacgCCUGUGa 2 8 26 48 [ce6:V:6509965-6509987:-] 0.5703 120 6 -19.41 -0.1871 MIMAT0000306 cel-miR-250 179039 ubh-1 acgguugucaaCUGACACUAa | ||||||| ucucgcuuuacGCCUGUGAUu 2 11 30 50 [ce6:V:6509963-6509983:-] 0.5703 142 7 -12.48 -0.7722 MIMAT0004232 cel-miR-797 179039 ubh-1 agAAGAGUAACACUAACGACACUAu |||||: | | | ||||||| gaUUCUCGCU-UUACGCCUGUGAUu 2 24 27 50 [ce6:V:6509963-6509986:-] 0.5703 157 7 -16.04 -0.7649

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-2 18 51 CGUGUAGUUU------CGAC---C-GACACUAU : ||| ||| | ||||||| UUUGAUCUUGAUUCUCGCUUUACGCCUGUGAUU ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-249 32 50 CCGUUGCGAGUUUUCAGGACACU- ||||: ||||||| ----UCGCUUUACG--CCUGUGAU ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-257 14 35 AGUGACCCAUGAGGACUAUGAG- |||| ||:|||| ||| ACACUUUGA--UCUUGAUUCUCG ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-43 25 51 CGCUGU---CGUUCAUUUGACACUAU :||: || ||||||| UUGAUUCUCGCUUUACGCCUGUGAUU ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-797 28 57 AGAAGAGUA--------ACACUAACGACACUAU |||||: ||||||| ||| -AUUCUCGCUUUACGCCUGUGAUUUUUGUA--- ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-82 7 28 UGACCGAAA--GUGCUACUAGAGU ||||| ||| ||||||: ---UGCUUUAACACUUUGAUCUUG ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-249 28 48 ccguuGCGAGUUUUCAGGACACU ||||: | : ||||||| attctCGCTTTACG--CCTGTGA ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-797 27 50 agAAGAGUAACACUAACGACACUAu |||||: | | | ||||||| gaTTCTCGCT-TTACGCCTGTGATt ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-82 4 27 ugacCGAAA--GUGCUACUAGAgu ||||| ||| |||||| ccatGCTTTAACACTTTGATCTtg ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-2 43 50 C------------------------GUGUAGUUUCGACCGACACUAU |:| |:| || ||||||| GCUUUAACACUUUGAUCUUGAUUCUCGCUUUAC-GC---CUGUGAUU ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-43 43 50 C-----------------GCUGU---CGUUCAUUUGACACUAU :||: || ||||||| GCUUUAACACUUUGAUCUUGAUUCUCGCUUUACGCCUGUGAUU ubh-1; CELE_F46E10.8; F46E10.8 cel-miR-797 43 50 AG-------------------AAGAGUAACACUAACGACACUAU |||||: ||||||| GCUUUAACACUUUGAUCUUGAUUCUCGCUUUACGC-CUGUGAUU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ubh-1 RAID00396163 cel-miR-79-3p miRNA MIMAT0000051 ubh-1 mRNA 179039 Prediction 0.1828 ubh-1 RAID01728680 cel-miR-250-3p miRNA MIMAT0000306 ubh-1 mRNA 179039 Prediction 0.2202 ubh-1 RAID02041841 cel-miR-2-3p miRNA MIMAT0000004 ubh-1 mRNA 179039 Prediction 0.2202 ubh-1 RAID02329112 cel-miR-249-3p miRNA MIMAT0000305 ubh-1 mRNA 179039 Prediction 0.2202 ubh-1 RAID03090415 cel-miR-43-3p miRNA MIMAT0000014 ubh-1 mRNA 179039 Prediction 0.2202 ubh-1 RAID03328987 cel-miR-797-5p miRNA MIMAT0004232 ubh-1 mRNA 179039 Prediction 0.2381