DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015096 cel-miR-46* 172394 unc-37 gacaguuaucugccGAGAGAa |||||| gauaaucguuucauCUCUCUc 2 8 54 74 [ce6:I:6742451-6742471:-] 0.5686 120 6 -10.07 -0.1371 MIMAT0015096 cel-miR-46* 172394 unc-37 gacaguuaucugccGAGAGAa |||||| gauaaucguuucauCUCUCUc 2 8 54 74 [ce6:I:6742451-6742471:-] 0.5686 120 6 -10.07 -0.1373 MIMAT0015097 cel-miR-47* 172394 unc-37 ugacaguuaucugacGAGAGAa |||||| cgauaaucguuucauCUCUCUc 2 8 53 74 [ce6:I:6742451-6742472:-] 0.5686 120 6 -10.88 -0.1371 MIMAT0015097 cel-miR-47* 172394 unc-37 ugacaguuaucugacGAGAGAa |||||| cgauaaucguuucauCUCUCUc 2 8 53 74 [ce6:I:6742451-6742472:-] 0.5686 120 6 -10.88 -0.1373 MIMAT0000312 cel-miR-257 172394 unc-37 agugacccAUGAGGACUAUGAg |: || ||||||| ugaauuuaUGAUCAUGAUACUc 2 15 14 35 [ce6:I:6742490-6742511:-] 0.5686 150 7 -12.21 -0.5943 MIMAT0000312 cel-miR-257 172394 unc-37 agugacccAUGAGGACUAUGAg |: || ||||||| ugaauuuaUGAUCAUGAUACUc 2 15 14 35 [ce6:I:6742490-6742511:-] 0.5686 150 7 -12.21 -0.7743 MIMAT0000313 cel-miR-258 172394 unc-37 uuuuccUAAGGAGAGUUUUGg || : |||||||| augaucAUGAUACUCAAAACc 2 16 21 41 [ce6:I:6742484-6742504:-] 0.5686 147 7 -14.06 -0.6234 MIMAT0000313 cel-miR-258 172394 unc-37 uuuuccuaaggagaGUUUUGg |||||| auuuauuugcacuaCAAAACa 2 8 155 175 [ce6:I:6742350-6742370:-] 0.5686 120 6 -8.35 -0.2387 MIMAT0000313 cel-miR-258 172394 unc-37 uuuuccUAAGGAGAGUUUUGg || : |||||||| augaucAUGAUACUCAAAACc 2 16 21 41 [ce6:I:6742484-6742504:-] 0.5686 147 7 -14.06 -0.6238 MIMAT0000313 cel-miR-258 172394 unc-37 uuUUCCUAAGGAGAGUUUUgg || | | |:|||||| uuAAUAAAACAUUUCAAAAau 3 20 205 225 [ce6:I:6742300-6742320:-] 0.6833 131 0 -5.99 -0.3917 MIMAT0000313 cel-miR-258 172394 unc-37 uuuuccuaaggagaGUUUUGg |||||| auuuauuugcacuaCAAAACa 2 8 155 175 [ce6:I:6742350-6742370:-] 0.5686 120 6 -8.35 -0.2397 MIMAT0000326 cel-miR-270 172394 unc-37 gaggugacGAUG-UAGUACgg :||: |||||| cagugaauUUAUGAUCAUGau 3 13 11 31 [ce6:I:6742494-6742514:-] 0.5686 123 0 -9.35 -0.1131 MIMAT0000326 cel-miR-270 172394 unc-37 gaggugacGAUG-UAGUACgg :||: |||||| cagugaauUUAUGAUCAUGau 3 13 11 31 [ce6:I:6742494-6742514:-] 0.5686 123 0 -9.35 -0.1631 MIMAT0000695 cel-miR-353 172394 unc-37 uuaugguuguguacCGUUAAc |||||| acuugacuuuaacaGCAAUUa 2 8 187 207 [ce6:I:6742318-6742338:-] 0.5686 120 6 -7.10 -0.3234 MIMAT0000695 cel-miR-353 172394 unc-37 uuaugguuguguacCGUUAAc |||||| acuugacuuuaacaGCAAUUa 2 8 187 207 [ce6:I:6742318-6742338:-] 0.5686 120 6 -7.10 -0.2993 MIMAT0015240 cel-miR-788* 172394 unc-37 gcUAA-GAUUAGGUAAAGg ||| ||| |||||| caAUUAAUAAAACAUUUCa 2 17 202 220 [ce6:I:6742305-6742323:-] 0.6833 123 6 -8.90 -0.4728 MIMAT0015240 cel-miR-788* 172394 unc-37 gcUAA-GAUUAGGUAAAGg ||| ||| |||||| caAUUAAUAAAACAUUUCa 2 17 202 220 [ce6:I:6742305-6742323:-] 0.6833 123 6 -8.90 -0.9887 MIMAT0015241 cel-miR-797* 172394 unc-37 uaAAGUGUCUUUGGUUACUUUu || |||| ||::||| ||| cuUUAACAGCAAUUAAUAAAAc 2 21 193 214 [ce6:I:6742311-6742332:-] 0.5686 144 0 -10.31 -0.1024 MIMAT0005031 cel-miR-1018 172394 unc-37 gacAUUCAGGUUACUAGAGAGa ||| || | ||||||| cgaUAA-UCGUUUCAUCUCUCu 2 20 53 73 [ce6:I:6742452-6742472:-] 0.5686 149 7 -13.19 -0.9213 MIMAT0005031 cel-miR-1018 172394 unc-37 gacAUUCAGGUUACUAGAGAGa ||| || | ||||||| cgaUAA-UCGUUUCAUCUCUCu 2 20 53 73 [ce6:I:6742452-6742472:-] 0.5686 149 7 -13.19 -0.9217 MIMAT0005523 cel-miR-1022 172394 unc-37 cuaccgcaggaUUGUUACUAGAa ||::||||||| cacuacaaaacAAUGAUGAUCUg 2 13 164 186 [ce6:I:6742339-6742361:-] 0.5686 152 7 -10.46 -0.8566 MIMAT0005523 cel-miR-1022 172394 unc-37 cuaccgcaggaUUGUUACUAGAa ||::||||||| cacuacaaaacAAUGAUGAUCUg 2 13 164 186 [ce6:I:6742339-6742361:-] 0.5686 152 7 -10.46 -0.8581 MIMAT0006587 cel-miR-1820 172394 unc-37 cuUGUAGUAGCUUUUUGUUAGUUUu || |:| | : || :||| ||| ugACUUUAACAGCAAUUAAUAAAAc 2 24 190 214 [ce6:I:6742311-6742335:-] 0.5686 131 0 -5.38 -0.1055 MIMAT0006776 cel-miR-1834 172394 unc-37 aaccuagaGUUACCAACUAGAga |||| | |||||| cuacaaaaCAAU-GAUGAUCUga 3 16 166 187 [ce6:I:6742338-6742359:-] 0.5686 133 0 -11.66 -0.1716 MIMAT0006776 cel-miR-1834 172394 unc-37 aaccuagaGUUACCAACUAGAga |||| | |||||| cuacaaaaCAAU-GAUGAUCUga 3 16 166 187 [ce6:I:6742338-6742359:-] 0.5686 133 0 -11.66 -0.1720 MIMAT0011431 cel-miR-2209a* 172394 unc-37 cuuccucuucucaccAAUGUGAg ||:|||| aaaacauuuauuuauUUGCACUa 2 9 146 168 [ce6:I:6742357-6742379:-] 0.5686 124 0 -6.57 -0.1267 MIMAT0011431 cel-miR-2209a* 172394 unc-37 cuuccucuucucaccAAUGUGAg ||:|||| aaaacauuuauuuauUUGCACUa 2 9 146 168 [ce6:I:6742357-6742379:-] 0.5686 124 0 -6.57 -0.1275 MIMAT0011432 cel-miR-2209a 172394 unc-37 acaucacauUGGCGACUAGAga | :| |||||| cuacaaaacAAUGAUGAUCUga 3 14 166 187 [ce6:I:6742338-6742359:-] 0.5686 125 0 -7.54 -0.1765 MIMAT0011432 cel-miR-2209a 172394 unc-37 acaucacauUGGCGACUAGAga | :| |||||| cuacaaaacAAUGAUGAUCUga 3 14 166 187 [ce6:I:6742338-6742359:-] 0.5686 125 0 -7.54 -0.1770 MIMAT0011433 cel-miR-2209c* 172394 unc-37 uuuguucugcacgccAAUGUGAg ||:|||| aaaacauuuauuuauUUGCACUa 2 9 146 168 [ce6:I:6742357-6742379:-] 0.5686 124 0 -9.20 -0.1242 MIMAT0011433 cel-miR-2209c* 172394 unc-37 uuuguucugcacgccAAUGUGAg ||:|||| aaaacauuuauuuauUUGCACUa 2 9 146 168 [ce6:I:6742357-6742379:-] 0.5686 124 0 -9.20 -0.1250 MIMAT0011436 cel-miR-2210* 172394 unc-37 cacccaucucgUUAGCUGAAAu | |:|||||| augaugaucugACUUGACUUUa 2 12 176 197 [ce6:I:6742328-6742349:-] 0.5686 131 6 -8.74 -0.2167 MIMAT0011436 cel-miR-2210* 172394 unc-37 cacccaucucgUUAGCUGAAAu | |:|||||| augaugaucugACUUGACUUUa 2 12 176 197 [ce6:I:6742328-6742349:-] 0.5686 131 6 -8.74 -0.2150 MIMAT0011444 cel-miR-2214 172394 unc-37 uugcggccaGUUCAA-C-AACAGUUac :|| || | ||||||| caucucuucUAAUUUCGUUUGUCAAau 3 17 74 100 [ce6:I:6742425-6742451:-] 0.5686 130 0 -7.36 -0.1334 MIMAT0011444 cel-miR-2214 172394 unc-37 uugcggccaGUUCAA-C-AACAGUUac :|| || | ||||||| caucucuucUAAUUUCGUUUGUCAAau 3 17 74 100 [ce6:I:6742425-6742451:-] 0.5686 130 0 -7.36 -0.1335 MIMAT0011446 cel-miR-2215 172394 unc-37 uuuguUGUGCG-CGAUGCUAAga ::|| | :||||||| uuuguGUACCCUAUUACGAUUaa 3 18 108 130 [ce6:I:6742395-6742417:-] 0.5686 128 0 -9.98 -0.1519 MIMAT0011446 cel-miR-2215 172394 unc-37 uuuguUGUGCG-CGAUGCUAAga ::|| | :||||||| uuuguGUACCCUAUUACGAUUaa 3 18 108 130 [ce6:I:6742395-6742417:-] 0.5686 128 0 -9.98 -0.1521 MIMAT0011451 cel-miR-2217* 172394 unc-37 cuagcUGUGGCUGACGGGUGAGAc ||: : | || :|||||| cuauuACGAUUAAUG-UCACUCUa 2 20 118 140 [ce6:I:6742385-6742407:-] 0.5686 133 6 -14.99 -0.1851 MIMAT0011451 cel-miR-2217* 172394 unc-37 cuagcUGUGGCUGACGGGUGAGAc ||: : | || :|||||| cuauuACGAUUAAUG-UCACUCUa 2 20 118 140 [ce6:I:6742385-6742407:-] 0.5686 133 6 -14.99 -0.1853 MIMAT0011454 cel-miR-2209b 172394 unc-37 acuucgUGUUGGC-GAGUAGAGa |:||:|| :||||||| uguacgAUAAUCGUUUCAUCUCu 2 17 49 71 [ce6:I:6742454-6742476:-] 0.5686 159 7 -21.65 -1.0569 MIMAT0011454 cel-miR-2209b 172394 unc-37 acuucgUGUUGGC-GAGUAGAGa |:||:|| :||||||| uguacgAUAAUCGUUUCAUCUCu 2 17 49 71 [ce6:I:6742454-6742476:-] 0.5686 159 7 -21.65 -1.0572 MIMAT0011460 cel-miR-2219 172394 unc-37 gaaGUCGA-AAGGGAGCGUGAAGc || :| ||: :|:||||| | aaaCAUUUAUUUAUUUGCACUACa 2 21 147 170 [ce6:I:6742355-6742378:-] 0.5686 127 0 -10.74 -0.2204 MIMAT0011460 cel-miR-2219 172394 unc-37 gaaGUCGA-AAGGGAGCGUGAAGc || :| ||: :|:||||| | aaaCAUUUAUUUAUUUGCACUACa 2 21 147 170 [ce6:I:6742355-6742378:-] 0.5686 127 0 -10.74 -0.2213 MIMAT0000003 cel-miR-1 172394 unc-37 auguaugaagaaaUGUAAGGu |||||:| agcaauuaauaaaACAUUUCa 2 9 200 220 [ce6:I:6742305-6742325:-] 0.6833 124 0 -8.33 -0.1908 MIMAT0000003 cel-miR-1 172394 unc-37 auguaugaagaaaUGUAAGGu |||||:| agcaauuaauaaaACAUUUCa 2 9 200 220 [ce6:I:6742305-6742325:-] 0.6833 124 0 -8.33 -0.6102 MIMAT0000021 cel-miR-50 172394 unc-37 ggGUUCUUA--UGGUCUGUAUAGu ||: ||| |: | |||| || aaCAGCAAUUAAUAAAACAUUUCa 2 21 197 220 [ce6:I:6742305-6742328:-] 0.6833 123 0 -7.70 -0.3305 MIMAT0000053 cel-miR-80 172394 unc-37 agccgaaaGUUGAUUACUAGAgu ||| |:||||||| cuacaaaaCAA-UGAUGAUCUga 3 16 166 187 [ce6:I:6742338-6742359:-] 0.5686 137 0 -13.43 -0.1732 MIMAT0000053 cel-miR-80 172394 unc-37 agccgaaaGUUGAUUACUAGAgu ||| |:||||||| cuacaaaaCAA-UGAUGAUCUga 3 16 166 187 [ce6:I:6742338-6742359:-] 0.5686 137 0 -13.43 -0.1737 MIMAT0000054 cel-miR-81 172394 unc-37 ugaucgaaagUGCUACUAGAgu |:|||||||| cuacaaaacaAUGAUGAUCUga 3 13 166 187 [ce6:I:6742338-6742359:-] 0.5686 136 0 -14.88 -0.1765 MIMAT0000054 cel-miR-81 172394 unc-37 ugaucgaaagUGCUACUAGAgu |:|||||||| cuacaaaacaAUGAUGAUCUga 3 13 166 187 [ce6:I:6742338-6742359:-] 0.5686 136 0 -14.88 -0.1770 MIMAT0000055 cel-miR-82 172394 unc-37 ugaccgaaagUGCUACUAGAgu |:|||||||| cuacaaaacaAUGAUGAUCUga 3 13 166 187 [ce6:I:6742338-6742359:-] 0.5686 136 0 -14.88 -0.1765 MIMAT0000055 cel-miR-82 172394 unc-37 ugaccgaaagUGCUACUAGAgu |:|||||||| cuacaaaacaAUGAUGAUCUga 3 13 166 187 [ce6:I:6742338-6742359:-] 0.5686 136 0 -14.88 -0.1770 MIMAT0000061 cel-miR-90 172394 unc-37 ucccCGUAAGUU-UGUUGUAUAGu ||| |:|| | ||||| || aacaGCAAUUAAUAAAACAUUUCa 2 20 197 220 [ce6:I:6742305-6742328:-] 0.6833 134 0 -11.82 -0.3332 MIMAT0000289 cel-miR-234 172394 unc-37 uucccauAAGAGCUCGUUAuu ||: |||||| acuugacUUUAACAGCAAUua 3 15 187 207 [ce6:I:6742318-6742338:-] 0.5686 122 0 -7.75 -0.2944 MIMAT0000289 cel-miR-234 172394 unc-37 uucccauAAGAGCUCGUUAuu ||: |||||| acuugacUUUAACAGCAAUua 3 15 187 207 [ce6:I:6742318-6742338:-] 0.5686 122 0 -7.75 -0.2720 MIMAT0000310 cel-miR-254 172394 unc-37 ggaugucagcgcuuucUAAACGu |||||| uuuaaaacauuuauuuAUUUGCa 2 8 143 165 [ce6:I:6742360-6742382:-] 0.5686 120 6 -6.13 -0.3072 MIMAT0000310 cel-miR-254 172394 unc-37 ggaugucagcgcuuucUAAACGu |||||| uuuaaaacauuuauuuAUUUGCa 2 8 143 165 [ce6:I:6742360-6742382:-] 0.5686 120 6 -6.13 -0.3084 MIMAT0000697 cel-miR-355 172394 unc-37 guAUCGA-GUCCGAUUUUGUUu || :| || ||||||| uuUAUUUGCACUACAAAACAAu 2 20 156 177 [ce6:I:6742348-6742369:-] 0.5686 142 7 -5.01 -0.8651 MIMAT0000697 cel-miR-355 172394 unc-37 guaucGAGUCCGAUUUUGUuu || | :||||||| ucacuCUAUGUUUAAAACAuu 3 17 133 153 [ce6:I:6742372-6742392:-] 0.5686 132 0 -9.92 -0.2137 MIMAT0000697 cel-miR-355 172394 unc-37 guaucgaguccgAUUUUGUuu ||||||| aacagcaauuaaUAAAACAuu 3 10 197 217 [ce6:I:6742308-6742328:-] 0.5686 125 0 -6.98 -0.2904 MIMAT0000697 cel-miR-355 172394 unc-37 guAUCGA-GUCCGAUUUUGUUu || :| || ||||||| uuUAUUUGCACUACAAAACAAu 2 20 156 177 [ce6:I:6742348-6742369:-] 0.5686 142 7 -5.01 -0.8652 MIMAT0000697 cel-miR-355 172394 unc-37 guaucGAGUCCGAUUUUGUuu || | :||||||| ucacuCUAUGUUUAAAACAuu 3 17 133 153 [ce6:I:6742372-6742392:-] 0.5686 132 0 -9.92 -0.2136 MIMAT0000749 cel-lsy-6 172394 unc-37 gcuuuacgcagaguAUGUUUu |||||| uuauuuauuugcacUACAAAa 2 8 153 173 [ce6:I:6742352-6742372:-] 0.5686 120 6 -7.95 -0.1872 MIMAT0000749 cel-lsy-6 172394 unc-37 gcuuuacgcagaguAUGUUUu |||||| uuauuuauuugcacUACAAAa 2 8 153 173 [ce6:I:6742352-6742372:-] 0.5686 120 6 -7.95 -0.1881 MIMAT0000768 cel-miR-392 172394 unc-37 agUAGUGUGCACUAGCUACUAu | :||| | :|||||| gcACUACAAAACAAUGAUGAUc 2 21 163 184 [ce6:I:6742341-6742362:-] 0.5686 132 6 -13.08 -0.1273 MIMAT0000768 cel-miR-392 172394 unc-37 agUAGUGUGCACUAGCUACUAu | :||| | :|||||| gcACUACAAAACAAUGAUGAUc 2 21 163 184 [ce6:I:6742341-6742362:-] 0.5686 132 6 -13.08 -0.1276 MIMAT0004227 cel-miR-792 172394 unc-37 agacuuucaacuucucUAAAGUu |||||| cagcaauuaauaaaacAUUUCAa 2 8 199 221 [ce6:I:6742304-6742326:-] 0.6833 120 6 -4.33 -0.9511 MIMAT0004227 cel-miR-792 172394 unc-37 agacuuucaacuucucUAAAGUu |||||| cagcaauuaauaaaacAUUUCAa 2 8 199 221 [ce6:I:6742304-6742326:-] 0.6833 120 6 -4.33 -0.8175 MIMAT0004231 cel-miR-796 172394 unc-37 aauGAUUGGAGUUGA------UGUAAGGu :|||| |||:| |||||:| acuUUAACAGCAAUUAAUAAAACAUUUCa 2 21 192 220 [ce6:I:6742305-6742333:-] 0.6833 131 0 -16.44 -0.1926 MIMAT0004231 cel-miR-796 172394 unc-37 aauGAUUGGAGUUGA------UGUAAGGu :|||| |||:| |||||:| acuUUAACAGCAAUUAAUAAAACAUUUCa 2 21 192 220 [ce6:I:6742305-6742333:-] 0.6833 131 0 -16.44 -0.6139

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score unc-37 RAID00046951 cel-miR-90-3p miRNA MIMAT0000061 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID00676148 cel-lsy-6-3p miRNA MIMAT0000749 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID01255055 cel-miR-80-3p miRNA MIMAT0000053 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID01667045 cel-miR-82-3p miRNA MIMAT0000055 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID01923016 cel-miR-796 miRNA MIMAT0004231 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID02027306 cel-miR-355-5p miRNA MIMAT0000697 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID02120994 cel-miR-792-3p miRNA MIMAT0004227 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID02136069 cel-miR-392-3p miRNA MIMAT0000768 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID02754155 cel-miR-1-3p miRNA MIMAT0000003 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID03113461 cel-miR-50-5p miRNA MIMAT0000021 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID03213222 cel-miR-234-3p miRNA MIMAT0000289 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID03237513 cel-miR-254-3p miRNA MIMAT0000310 unc-37 mRNA 172394 Prediction 0.1828 unc-37 RAID03486624 cel-miR-81-3p miRNA MIMAT0000054 unc-37 mRNA 172394 Prediction 0.1828