DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015115 cel-miR-239b* 179520 tag-318 aaAAACGUGUGGUGUUUUCAcg ||| :| | |||||| guUUUAGUUAAAAAAAAAGUuu 3 21 113 134 [ce6:V:10958994-10959015:-] 0.4929 128 0 -4.73 -0.1163 MIMAT0015115 cel-miR-239b* 179520 tag-318 aaAAACGUGUGGUGUUUUCAcg ||| :| | |||||| guUUUAGUUAAAAAAAAAGUuu 3 21 113 134 [ce6:V:10958994-10959015:-] 0.4929 128 0 -4.73 -0.1166 MIMAT0011438 cel-miR-2211 179520 tag-318 aaAGAGGAGAUUUA----AGAUGGACu |:|| :|:||| | |||||| ugUUUCAGUUGAAUAUUAUGUACCUGc 2 22 47 73 [ce6:V:10959055-10959081:-] 0.4929 124 6 -15.71 -0.2059 MIMAT0011438 cel-miR-2211 179520 tag-318 aaAGAGGAGAUUUA----AGAUGGACu |:|| :|:||| | |||||| ugUUUCAGUUGAAUAUUAUGUACCUGc 2 22 47 73 [ce6:V:10959055-10959081:-] 0.4929 124 6 -15.71 -0.2063 MIMAT0000015 cel-miR-44 179520 tag-318 ucgacuuacacagaGAUCAGu |||||| uuuuccuuauugucCUAGUCg 2 8 93 113 [ce6:V:10959015-10959035:-] 0.4929 120 6 -15.23 -0.1742 MIMAT0000015 cel-miR-44 179520 tag-318 ucgacuuacacagaGAUCAGu |||||| uuuuccuuauugucCUAGUCg 2 8 93 113 [ce6:V:10959015-10959035:-] 0.4929 120 6 -15.23 -0.1745 MIMAT0000016 cel-miR-45 179520 tag-318 ucgacuuacacagaGAUCAGu |||||| uuuuccuuauugucCUAGUCg 2 8 93 113 [ce6:V:10959015-10959035:-] 0.4929 120 6 -15.23 -0.1742 MIMAT0000016 cel-miR-45 179520 tag-318 ucgacuuacacagaGAUCAGu |||||| uuuuccuuauugucCUAGUCg 2 8 93 113 [ce6:V:10959015-10959035:-] 0.4929 120 6 -15.23 -0.1745 MIMAT0000033 cel-miR-61 179520 tag-318 cuacucAUUGCCAAGAUCAGu | |: || |||||| uuuuccUUAUUGUCCUAGUCg 2 16 93 113 [ce6:V:10959015-10959035:-] 0.4929 123 6 -10.62 -0.1792 MIMAT0000033 cel-miR-61 179520 tag-318 cuacucAUUGCCAAGAUCAGu | |: || |||||| uuuuccUUAUUGUCCUAGUCg 2 16 93 113 [ce6:V:10959015-10959035:-] 0.4929 123 6 -10.62 -0.1795 MIMAT0000039 cel-miR-67 179520 tag-318 agaugagaaagauccucCAACACu |||||| cuucaucaaucauuuucGUUGUGu 2 8 21 44 [ce6:V:10959084-10959107:-] 0.5627 120 6 -8.47 -0.1475 MIMAT0000039 cel-miR-67 179520 tag-318 agaugagaaagauccucCAACACu |||||| cuucaucaaucauuuucGUUGUGu 2 8 21 44 [ce6:V:10959084-10959107:-] 0.5627 120 6 -8.47 -0.1477 MIMAT0000303 cel-miR-247 179520 tag-318 ucuucucuuauccgaGAUCAGu |||||| auuuuccuuauugucCUAGUCg 2 8 92 113 [ce6:V:10959015-10959036:-] 0.4929 120 6 -9.96 -0.1792 MIMAT0000303 cel-miR-247 179520 tag-318 ucuucucuuauccgaGAUCAGu |||||| auuuuccuuauugucCUAGUCg 2 8 92 113 [ce6:V:10959015-10959036:-] 0.4929 120 6 -9.96 -0.1795 MIMAT0000307 cel-miR-251 179520 tag-318 uuaUUCUCGCCGUGGUGAUGAAuu || | : :|:: |||||| --aAAUAAUUUUAUU-CUACUUuc 3 22 1 21 [ce6:V:10959107-10959127:-] 0.6324 123 0 -7.57 -0.2518 MIMAT0000307 cel-miR-251 179520 tag-318 uuaUUCUCGCCGUGGUGAUGAAuu || | : :|:: |||||| --aAAUAAUUUUAUU-CUACUUuc 3 22 1 21 [ce6:V:10959107-10959127:-] 0.6324 123 0 -7.57 -0.2307 MIMAT0000308 cel-miR-252 179520 tag-318 aauggacgccGUGAUGAUGAAua :|:| |||||| -aaauaauuuUAUU-CUACUUuc 3 14 1 21 [ce6:V:10959107-10959127:-] 0.6324 123 0 -7.42 -0.2518 MIMAT0000308 cel-miR-252 179520 tag-318 aauggacgccGUGAUGAUGAAua :|:| |||||| -aaauaauuuUAUU-CUACUUuc 3 14 1 21 [ce6:V:10959107-10959127:-] 0.6324 123 0 -7.42 -0.2307 MIMAT0004216 cel-miR-255 179520 tag-318 gacauuuuuuAGA-GAAGUCAAa ||| :||||||| uucguuguguUCUGUUUCAGUUg 2 13 35 57 [ce6:V:10959071-10959093:-] 0.5627 147 7 -13.57 -0.9920 MIMAT0004216 cel-miR-255 179520 tag-318 gacauuuuuuAGA-GAAGUCAAa ||| :||||||| uucguuguguUCUGUUUCAGUUg 2 13 35 57 [ce6:V:10959071-10959093:-] 0.5627 147 7 -13.57 -0.9926

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 vps-36; CELE_F17C11.8; F17C11.8 cel-miR-231 43 78 -AAGACGGA--CAACU---AGUGCU----CGAAU- |||||::| ||||| |:|:| ||||| GUUCUGUUUCAGUUGAAUAUUAUGUACCUGCUUAU vps-36; CELE_F17C11.8; F17C11.8 cel-miR-255 39 58 GACAUUUUUUAGA-GAAGUCAAA |||: ||| :||||||| UUGUGU----UCUGUUUCAGUUG vps-36; CELE_F17C11.8; F17C11.8 cel-miR-265 163 191 UAUGGUG-GGA-------AGGAGGGAGU- :||| ||| |::|:||||| -CGCCAAACCUAGAUCUCUUUUUCCUCAA vps-36; CELE_F17C11.8; F17C11.8 cel-miR-268 136 155 UGGUUUGACGAAGAUUAAGAACGG- :|||||| ||||| |||| -----UUUGCUUCCAAUUC-UGCCU vps-36; CELE_F17C11.8; F17C11.8 cel-miR-34 134 156 GUUGGUCGAUUGGUGU-GACGGA- |: ||| ||| |||||| -UAUUUGCUU-CCAAUUCUGCCUU vps-36; CELE_F17C11.8; F17C11.8 cel-miR-44 85 115 UCGACUUACA------------CAGAGAUCAGU- ||:||| ||| ||||||: ---CGAGUGUAUUUUCCUUAUUGUC-CUAGUCGU vps-36; CELE_F17C11.8; F17C11.8 cel-miR-45 85 115 UCGACUUACA------------CAGAGAUCAGU- ||:||| ||| ||||||: ---CGAGUGUAUUUUCCUUAUUGUC-CUAGUCGU vps-36; CELE_F17C11.8; F17C11.8 cel-miR-791 149 171 -ACGGAAUAGACGCCUCACGGUUU- |||||| || |: |||||| CUGCCUUUUCCGUUC---GCCAAAC vps-36; CELE_F17C11.8; F17C11.8 cel-miR-231 68 92 aaGACGG--ACAACUAGUGCUCGAAU ||||: || ||| |||||: || acCTGCTTATGATGA-AACGAGTGTA vps-36; CELE_F17C11.8; F17C11.8 cel-miR-265 167 189 UAUGG---UGGGAAGGAGGGAGU | ||| |:|: |::|:||||| AAACCTAGATCTCTTTTTCCTCA vps-36; CELE_F17C11.8; F17C11.8 cel-miR-268 131 153 ugguUUGACGAAGAUUAAGAACGG | :|||||| ||||| |||| gtttATTTGCTTCCAATTC-TGCC vps-36; CELE_F17C11.8; F17C11.8 cel-miR-34 133 154 guUGGUCGAUUGGUGUGACGGA |:: ||| | |: |||||| ttATTTGCTTCCAATTCTGCCT vps-36; CELE_F17C11.8; F17C11.8 cel-miR-44 96 113 ucGACUUACACAGAGAUCAGu || | ||| |||||| tcCTTATTGTC---CTAGTCg vps-36; CELE_F17C11.8; F17C11.8 cel-miR-45 96 113 ucGACUUACACAGAGAUCAGu || | ||| |||||| tcCTTATTGTC---CTAGTCg vps-36; CELE_F17C11.8; F17C11.8 cel-miR-791 150 169 ACGGAAUAGACGCCUCA--CGGUUU |||||| || | || |||||| TGCCTTTTC--C---GTTCGCCAAA vps-36; CELE_F17C11.8; F17C11.8 cel-miR-255 50 57 ------------------------GACAUUUUUUAGA-GAAGUCAAA :|||: ||| :||||||| UACUUUCUUCAUCAAUCAUUUUCGUUGUGU----UCUGUUUCAGUUG

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score vps-36 RAID01872960 cel-miR-247-3p miRNA MIMAT0000303 vps-36 mRNA 179520 Prediction 0.1828 vps-36 RAID02051741 cel-miR-45-3p miRNA MIMAT0000016 vps-36 mRNA 179520 Prediction 0.1828 vps-36 RAID02357947 cel-miR-251 miRNA MIMAT0000307 vps-36 mRNA 179520 Prediction 0.1828 vps-36 RAID02441680 cel-miR-255-3p miRNA MIMAT0004216 vps-36 mRNA 179520 Prediction 0.1828 vps-36 RAID02518191 cel-miR-61-3p miRNA MIMAT0000033 vps-36 mRNA 179520 Prediction 0.1828 vps-36 RAID03765491 cel-miR-67-3p miRNA MIMAT0000039 vps-36 mRNA 179520 Prediction 0.1828 vps-36 RAID03880178 cel-miR-44-3p miRNA MIMAT0000015 vps-36 mRNA 179520 Prediction 0.1828 vps-36 RAID04045055 cel-miR-252-5p miRNA MIMAT0000308 vps-36 mRNA 179520 Prediction 0.1828