DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015108 cel-miR-75* 175600 beta-transducin aaAUUCGAACGUUGGCUGAc || | | |||||||| gaUACGGGUAAAACCGACUu 2 19 88 107 [ce6:III:4581620-4581639:+] 0.4550 150 7 -14.21 -0.9814 MIMAT0015108 cel-miR-75* 175600 beta-transducin aaAUUCGAACGUUGGCUGAc || | | |||||||| gaUACGGGUAAAACCGACUu 2 19 88 107 [ce6:III:4581620-4581639:+] 0.4550 150 7 -14.21 -1.1389 MIMAT0000329 cel-miR-273 175600 beta-transducin gucggcugugucAUGCCCGu ||||||: cuucuuuuuugaUACGGGUa 2 9 78 97 [ce6:III:4581610-4581629:+] 0.4550 124 0 -13.25 -0.1665 MIMAT0000329 cel-miR-273 175600 beta-transducin gucggcugugucAUGCCCGu ||||||: cuucuuuuuugaUACGGGUa 2 9 78 97 [ce6:III:4581610-4581629:+] 0.4550 124 0 -13.25 -0.1315 MIMAT0011425 cel-miR-2207 175600 beta-transducin gaAUAUG-UGUCAGAGUUAAGUGu |:||| :| | ||||||| uuUGUACUUUAUUGAAAAUUCACu 2 22 48 71 [ce6:III:4581580-4581603:+] 0.4550 148 7 -11.98 -1.0816 MIMAT0011425 cel-miR-2207 175600 beta-transducin gaAUAUG-UGUCAGAGUUAAGUGu |:||| :| | ||||||| uuUGUACUUUAUUGAAAAUUCACu 2 22 48 71 [ce6:III:4581580-4581603:+] 0.4550 148 7 -11.98 -1.0832 MIMAT0011436 cel-miR-2210* 175600 beta-transducin caCCCAUCUCGUUAGCUGAAAu ||||| | || ||||||| acGGGUA-A--AACCGACUUUc 2 21 91 109 [ce6:III:4581623-4581641:+] 0.4550 155 7 -15.30 -0.1734 MIMAT0011436 cel-miR-2210* 175600 beta-transducin caCCCAUCUCGUUAGCUGAAAu ||||| | || ||||||| acGGGUA-A--AACCGACUUUc 2 21 91 109 [ce6:III:4581623-4581641:+] 0.4550 155 7 -15.30 -0.2208 MIMAT0011455 cel-miR-2218a 175600 beta-transducin acuccgaAUUUUGAACAUCAAAc ||| |:||||| ||| acuuaucUAACAUUUGUACUUUa 2 17 36 58 [ce6:III:4581568-4581590:+] 0.5492 136 0 -6.27 -0.1189 MIMAT0011455 cel-miR-2218a 175600 beta-transducin acuccgaAUUUUGAACAUCAAAc ||| |:||||| ||| acuuaucUAACAUUUGUACUUUa 2 17 36 58 [ce6:III:4581568-4581590:+] 0.5492 136 0 -6.27 -0.1189 MIMAT0000022 cel-miR-51 175600 beta-transducin uuguaccuauccuCGAUGCCCAu | ||||||| uaacuucuuuuuuGAUACGGGUa 2 11 75 97 [ce6:III:4581607-4581629:+] 0.4550 142 7 -13.97 -1.2337 MIMAT0000022 cel-miR-51 175600 beta-transducin uuguaccuauccuCGAUGCCCAu | ||||||| uaacuucuuuuuuGAUACGGGUa 2 11 75 97 [ce6:III:4581607-4581629:+] 0.4550 142 7 -13.97 -1.1939 MIMAT0000023 cel-miR-52 175600 beta-transducin ucgugccuuuguAUAC-AUGCCCAc | || ||||||| ucuaacuucuuuUUUGAUACGGGUa 2 13 73 97 [ce6:III:4581605-4581629:+] 0.4550 143 7 -12.44 -1.2363 MIMAT0000023 cel-miR-52 175600 beta-transducin ucgugccuuuguAUAC-AUGCCCAc | || ||||||| ucuaacuucuuuUUUGAUACGGGUa 2 13 73 97 [ce6:III:4581605-4581629:+] 0.4550 143 7 -12.44 -1.1972 MIMAT0000024 cel-miR-53 175600 beta-transducin ucgugccuuuguuuAC-AUGCCCAc || ||||||| ucuaacuucuuuuuUGAUACGGGUa 2 11 73 97 [ce6:III:4581605-4581629:+] 0.4550 141 7 -11.16 -1.2376 MIMAT0000024 cel-miR-53 175600 beta-transducin ucgugccuuuguuuAC-AUGCCCAc || ||||||| ucuaacuucuuuuuUGAUACGGGUa 2 11 73 97 [ce6:III:4581605-4581629:+] 0.4550 141 7 -11.16 -1.1988 MIMAT0000025 cel-miR-54 175600 beta-transducin gagccuaauacuuCUAAUGCCCAu || ||||||| uaacuucuuuuuuGA-UACGGGUa 2 12 75 97 [ce6:III:4581607-4581629:+] 0.4550 141 7 -15.25 -1.2231 MIMAT0000025 cel-miR-54 175600 beta-transducin gagccuaauacuuCUAAUGCCCAu || ||||||| uaacuucuuuuuuGA-UACGGGUa 2 12 75 97 [ce6:III:4581607-4581629:+] 0.4550 141 7 -15.25 -1.1807 MIMAT0000026 cel-miR-55 175600 beta-transducin gagucgucuuuGAAUAUGCCCAu :| |||||||| uaacuucuuuuUUGAUACGGGUa 2 13 75 97 [ce6:III:4581607-4581629:+] 0.4550 148 7 -16.07 -1.2376 MIMAT0000026 cel-miR-55 175600 beta-transducin gagucgucuuuGAAUAUGCCCAu :| |||||||| uaacuucuuuuUUGAUACGGGUa 2 13 75 97 [ce6:III:4581607-4581629:+] 0.4550 148 7 -16.07 -1.1988 MIMAT0000028 cel-miR-56 175600 beta-transducin gagucgccuuuguaAUGCCCAu ||||||| aacuucuuuuuugaUACGGGUa 2 9 76 97 [ce6:III:4581608-4581629:+] 0.4550 140 7 -13.49 -1.2363 MIMAT0000028 cel-miR-56 175600 beta-transducin gagucgccuuuguaAUGCCCAu ||||||| aacuucuuuuuugaUACGGGUa 2 9 76 97 [ce6:III:4581608-4581629:+] 0.4550 140 7 -13.49 -1.1972 MIMAT0000058 cel-miR-85 175600 beta-transducin cgugcUGAAAAGUUUAUG-AAACAu |||| || | || ||||| aacauACUUAUCUA--ACAUUUGUa 2 20 31 53 [ce6:III:4581563-4581585:+] 0.5492 120 0 -11.71 -1.2891 MIMAT0000058 cel-miR-85 175600 beta-transducin cgugcUGAAAAGUUUAUG-AAACAu |||| || | || ||||| aacauACUUAUCUA--ACAUUUGUa 2 20 31 53 [ce6:III:4581563-4581585:+] 0.5492 120 0 -11.71 -1.2908 MIMAT0000307 cel-miR-251 175600 beta-transducin uuauucucgccguggugAUGAAUu |||||| aguuauuuauuugaacaUACUUAu 2 8 18 41 [ce6:III:4581550-4581573:+] 0.5492 120 6 -7.57 -0.1402 MIMAT0000307 cel-miR-251 175600 beta-transducin uuauucucgccguggugAUGAAUu |||||| aguuauuuauuugaacaUACUUAu 2 8 18 41 [ce6:III:4581550-4581573:+] 0.5492 120 6 -7.57 -0.1409 MIMAT0000308 cel-miR-252 175600 beta-transducin aauggacgccgugaugAUGAAUa |||||| guuauuuauuugaacaUACUUAu 2 8 19 41 [ce6:III:4581551-4581573:+] 0.5492 120 6 -11.31 -0.1402 MIMAT0000308 cel-miR-252 175600 beta-transducin aauggacgccgugaugAUGAAUa |||||| guuauuuauuugaacaUACUUAu 2 8 19 41 [ce6:III:4581551-4581573:+] 0.5492 120 6 -11.31 -0.1409

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score wdr-48 RAID00255681 cel-miR-85-3p miRNA MIMAT0000058 wdr-48 mRNA 175600 Prediction 0.1828 wdr-48 RAID00944818 cel-miR-56-3p miRNA MIMAT0000028 wdr-48 mRNA 175600 Prediction 0.1828 wdr-48 RAID01321905 cel-miR-51-5p miRNA MIMAT0000022 wdr-48 mRNA 175600 Prediction 0.1828 wdr-48 RAID01743110 cel-miR-53-5p miRNA MIMAT0000024 wdr-48 mRNA 175600 Prediction 0.2202 wdr-48 RAID02023301 cel-miR-55-3p miRNA MIMAT0000026 wdr-48 mRNA 175600 Prediction 0.1828 wdr-48 RAID02049404 cel-miR-251 miRNA MIMAT0000307 wdr-48 mRNA 175600 Prediction 0.1828 wdr-48 RAID03536473 cel-miR-52-5p miRNA MIMAT0000023 wdr-48 mRNA 175600 Prediction 0.2202 wdr-48 RAID03733647 cel-miR-252-5p miRNA MIMAT0000308 wdr-48 mRNA 175600 Prediction 0.1828 wdr-48 RAID03848803 cel-miR-54-3p miRNA MIMAT0000025 wdr-48 mRNA 175600 Prediction 0.1828