DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015092 cel-lin-4* 172697 F36A2.13 caugggccucUCGGGUCCAca | :|||||| uuuuauauguAUUCCAGGUuu 3 12 104 124 [ce6:I:8828286-8828306:-] 0.5189 123 0 -10.46 -0.1202 MIMAT0015103 cel-miR-61* 172697 F36A2.13 ccugauucGGGGCAUUGGgu |:::|||||| -------aCUUUGUAACCau 3 13 1 13 [ce6:I:8828397-8828409:-] 0.6297 128 0 -15.00 -0.2316 MIMAT0015109 cel-miR-81* 172697 F36A2.13 agagucuagugccacUUUUGGc |||||| auuuauuuuuuucaaAAAACCa 2 8 180 201 [ce6:I:8828209-8828230:-] 0.5189 120 6 -6.07 -0.2199 MIMAT0015112 cel-miR-229* 172697 F36A2.13 gauacuGUGGGCUA--UGGAAAGa ||||:||| |||||| ucucccCACCUGAUAACCCUUUCg 2 17 74 97 [ce6:I:8828313-8828336:-] 0.4766 131 6 -20.84 -0.1144 MIMAT0015119 cel-miR-247* 172697 F36A2.13 ccauuAAUCUUUGAAAAGAGAu ||: || | |||:||| --acuUUGUAACCAUUUUUCUa 2 18 1 20 [ce6:I:8828390-8828409:-] 0.6297 141 0 -6.56 -0.1540 MIMAT0000313 cel-miR-258 172697 F36A2.13 uuuuccUAAGGAGAGUUUUgg |||::|:|||||| caauuuAUUUUUUUCAAAAaa 3 16 178 198 [ce6:I:8828212-8828232:-] 0.5189 143 0 -10.56 -0.1338 MIMAT0000326 cel-miR-270 172697 F36A2.13 gaggugacgauGUAGUACGg |||||||| uuucaaaaaacCAUCAUGCu 2 10 189 208 [ce6:I:8828202-8828221:-] 0.5189 145 7 -15.68 -0.9374 MIMAT0015240 cel-miR-788* 172697 F36A2.13 gcuAAGAUUAGGUAAAGg || ||| ||||||: acuUUGUAA-CCAUUUUu 2 16 1 17 [ce6:I:8828393-8828409:-] 0.6297 137 0 -7.77 -0.5589 MIMAT0006771 cel-miR-1829c 172697 F36A2.13 auGUUGGUAGAACUUAAAGCGAa ||| || ||| ||||||| cuCAAACAGCUU---UUUCGCUu 2 22 233 252 [ce6:I:8828158-8828177:-] 0.5189 157 7 -13.63 -0.7202 MIMAT0006771 cel-miR-1829c 172697 F36A2.13 auGUUGGU-AGAACUUAAAG-CGAa :||||| |:|| ||||| ||| ugUAACCAUUUUUCUAUUUCAGCUu 2 22 5 29 [ce6:I:8828381-8828405:-] 0.6297 136 0 -20.19 -1.3102 MIMAT0011427 cel-miR-2208a 172697 F36A2.13 ccuaUAGUCUAAGCCCAUGUGAa :|:||: || |||||| cuuaGUUAGGAUCAACUACACUa 2 20 207 229 [ce6:I:8828181-8828203:-] 0.5189 127 6 -12.26 -0.1239 MIMAT0011429 cel-miR-2208b-5p 172697 F36A2.13 ccuaUAGUCUAGGCCCAUGUGAa :|:||: :| |||||| cuuaGUUAGGAUCAACUACACUa 2 20 207 229 [ce6:I:8828181-8828203:-] 0.5189 123 6 -12.30 -0.1227 MIMAT0011431 cel-miR-2209a* 172697 F36A2.13 cuuccucuucucaccaAUGUGAg |||||| cuuaguuaggaucaacUACACUa 2 8 207 229 [ce6:I:8828181-8828203:-] 0.5189 120 6 -10.31 -0.1239 MIMAT0011433 cel-miR-2209c* 172697 F36A2.13 uuuguucugcacgccaAUGUGAg |||||| cuuaguuaggaucaacUACACUa 2 8 207 229 [ce6:I:8828181-8828203:-] 0.5189 120 6 -8.76 -0.1264 MIMAT0000047 cel-miR-75 172697 F36A2.13 acuucggccaaccaUCGAAAuu |||||| cauuuuucuauuucAGCUUUua 3 9 11 32 [ce6:I:8828378-8828399:-] 0.5181 120 0 -5.98 -0.7497 MIMAT0000051 cel-miR-79 172697 F36A2.13 ucGAAACCAUUGGAUCGAAAua :||| || :: |||||| caUUUUUCUAUUUCAGCUUUua 3 21 11 32 [ce6:I:8828378-8828399:-] 0.5181 136 0 -6.62 -0.7497 MIMAT0000058 cel-miR-85 172697 F36A2.13 cgugcugaaaaguuuaUGAAACAu ||||||| ----------------ACUUUGUa 2 9 1 8 [ce6:I:8828402-8828409:-] 0.6297 140 7 -8.64 -1.1201 MIMAT0000059 cel-miR-86 172697 F36A2.13 cugacaccguuucguAAGUGAAu ||||||| gacucacucaccaauUUCACUUu 2 9 273 295 [ce6:I:8828115-8828137:-] 0.5189 140 7 -10.34 -0.8260 MIMAT0004216 cel-miR-255 172697 F36A2.13 gacauuuuuuAGAGAAGUCAAa || |||||||| aacagcuuuuUCGCUUCAGUUu 2 13 237 258 [ce6:I:8828152-8828173:-] 0.5189 152 7 -12.01 -0.3354 MIMAT0004220 cel-miR-785 172697 F36A2.13 agauGUGUUUUGUU-AAGUGAAu ||| | ||| ||||||| gacuCACUCACCAAUUUCACUUu 2 19 273 295 [ce6:I:8828115-8828137:-] 0.5189 157 7 -14.37 -0.8224 MIMAT0004227 cel-miR-792 172697 F36A2.13 agacuuucaacuucucUAAAGUu |||||| uuguaaccauuuuucuAUUUCAg 2 8 4 26 [ce6:I:8828384-8828406:-] 0.6297 120 6 -4.60 -0.2201 MIMAT0004227 cel-miR-792 172697 F36A2.13 agacuuucaacuucucUAAAGUu |||||| ugcuaaaaucucuucuAUUUCAa 2 8 140 162 [ce6:I:8828248-8828270:-] 0.5189 120 6 -4.71 -0.1839

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ubr-5 RAID01375801 cel-miR-79-3p miRNA MIMAT0000051 ubr-5 mRNA 172697 Prediction 0.1828 ubr-5 RAID01617328 cel-miR-86-5p miRNA MIMAT0000059 ubr-5 mRNA 172697 Prediction 0.1828 ubr-5 RAID01719683 cel-miR-792-3p miRNA MIMAT0004227 ubr-5 mRNA 172697 Prediction 0.1828 ubr-5 RAID01739693 cel-miR-255-3p miRNA MIMAT0004216 ubr-5 mRNA 172697 Prediction 0.1828 ubr-5 RAID02035947 cel-miR-85-3p miRNA MIMAT0000058 ubr-5 mRNA 172697 Prediction 0.1828 ubr-5 RAID02429679 cel-miR-75-3p miRNA MIMAT0000047 ubr-5 mRNA 172697 Prediction 0.1828 ubr-5 RAID03362954 cel-miR-785-3p miRNA MIMAT0004220 ubr-5 mRNA 172697 Prediction 0.1828