DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015102 cel-miR-60* 185487 F39B2.5 uaaaauaCCGUGAGAAGGUCaa ||: : :|||||| aaaucucGGUUUCUUUCCAGaa 3 16 94 115 [ce6:I:14775127-14775148:-] 0.5730 127 0 -12.91 -0.1694 MIMAT0015112 cel-miR-229* 185487 F39B2.5 gauacugugggCUAUGGAAAGa || ||||||| auuaaaaaaaaGA-ACCUUUCg 2 12 183 203 [ce6:I:14775039-14775059:-] 0.4063 141 7 -8.91 -0.8717 MIMAT0015119 cel-miR-247* 185487 F39B2.5 ccAUUAAUCUUUG--AAAAGAGAu |||| | ||| |||||||| cuUAAUAAAUAACUUUUUUCUCUc 2 21 48 71 [ce6:I:14775171-14775194:-] 0.5730 163 7 -11.00 -1.2241 MIMAT0000323 cel-miR-267 185487 F39B2.5 acGUCGUCUGUGAAGUGCCc ||| | | : |||||| ucCAGAAAAAUUGUCACGGa 2 19 109 128 [ce6:I:14775114-14775133:-] 0.5730 122 6 -15.78 -0.1969 MIMAT0000329 cel-miR-273 185487 F39B2.5 gucggcuGUGUCAUGCCCgu |: | |||||| auuauauCGAAUUACGGGgu 3 14 16 35 [ce6:I:14775207-14775226:-] 0.5730 125 0 -14.64 -0.3422 MIMAT0015239 cel-miR-786* 185487 F39B2.5 cauuuaugggguugacUAUAAGc |||||| cucaaauuuaaguuauAUAUUCa 2 8 69 91 [ce6:I:14775151-14775173:-] 0.5730 120 6 -5.40 -0.5301 MIMAT0005031 cel-miR-1018 185487 F39B2.5 gacauucagguuacuAGAGAGa |||||| aauaaauaacuuuuuUCUCUCa 2 8 51 72 [ce6:I:14775170-14775191:-] 0.5730 120 6 -8.04 -0.5084 MIMAT0005822 cel-miR-1019* 185487 F39B2.5 uuuuacuuugagcuugUUACGAGUg ||||||:| uacgggguuuuuuuugAAUGCUUAa 2 10 28 52 [ce6:I:14775190-14775214:-] 0.5730 129 0 -10.88 -0.1483 MIMAT0005033 cel-miR-1020 185487 F39B2.5 gacuUUCACAGUGUCUUAUUa || || | ||||||| uuuuAAUUGGAAAAGAAUAAu 2 18 219 239 [ce6:I:14775003-14775023:-] 0.4063 153 7 -8.83 -1.0249 MIMAT0006587 cel-miR-1820 185487 F39B2.5 cuUGUAGUAGCUUUUUGUUAGUUUu || |: ||| |::||||||| gaACCUU-UCG---AGUAAUCAAAu 2 24 194 214 [ce6:I:14775028-14775048:-] 0.4063 149 7 -14.07 -1.0060 MIMAT0006590 cel-miR-1823 185487 F39B2.5 aaUGAGGAUUUGUG-AAGGUCau | ||: :: : | |||||| aaAAUCUCGGUUUCUUUCCAGaa 3 21 93 115 [ce6:I:14775127-14775149:-] 0.5730 123 0 -11.38 -0.1727 MIMAT0006768 cel-miR-1828 185487 F39B2.5 ugAUAGUGAAUUUACGAAGGUCa | ||: || | :|||||| aaUCUCGGUU---UCUUUCCAGa 2 22 95 114 [ce6:I:14775128-14775147:-] 0.5730 129 6 -10.98 -0.1724 MIMAT0006769 cel-miR-1829a 185487 F39B2.5 uuaucucUUUAA-GGUUACCAAc |::|| | ||||||| uuccauuAGGUUACGAAUGGUUc 2 16 356 378 [ce6:I:14774864-14774886:-] 0.3793 150 7 -9.86 -0.4562 MIMAT0011455 cel-miR-2218a 185487 F39B2.5 acuccgaauuuugaacAUCAAAc |||||| ----------uuguuuUAGUUUu 2 8 1 13 [ce6:I:14775229-14775241:-] 0.5730 120 6 -2.59 -0.1214 MIMAT0011455 cel-miR-2218a 185487 F39B2.5 acuccgaauuuugaacAUCAAAc |||||| ----------uuguuuUAGUUUu 2 8 1 13 [ce6:I:14775229-14775241:-] 0.5730 120 6 -2.59 -0.1456 MIMAT0011458 cel-miR-2218b* 185487 F39B2.5 agagugauguuugauGUUUAAa |||||| auaacuuuuuucucuCAAAUUu 2 8 56 77 [ce6:I:14775165-14775186:-] 0.5730 120 6 -7.03 -0.1659 MIMAT0011458 cel-miR-2218b* 185487 F39B2.5 agagugauguuugauGUUUAAa |||||| aaccuuucgaguaauCAAAUUu 2 8 195 216 [ce6:I:14775026-14775047:-] 0.4063 120 6 -8.29 -0.1022 MIMAT0011462 cel-miR-2220 185487 F39B2.5 gacAUUCAGGUGUUUGUUAACu ||| |:: :|||||||| gguUAAUUUUCAGAACAAUUGa 2 20 325 346 [ce6:I:14774896-14774917:-] 0.3928 159 7 -13.32 -1.0385 MIMAT0000022 cel-miR-51 185487 F39B2.5 uuguaccUAU-CCUCGAUGCCCau ||| || :|||||| uugaauuAUAUCGAAUUACGGGgu 3 17 12 35 [ce6:I:14775207-14775230:-] 0.5730 131 0 -12.98 -0.3422 MIMAT0000023 cel-miR-52 185487 F39B2.5 ucgugcCUUUGUAUA-C---AUGCCCac ||| :|||| | |||||| aguuuuGAAUUAUAUCGAAUUACGGGgu 3 19 8 35 [ce6:I:14775207-14775234:-] 0.5730 132 0 -14.15 -0.3478 MIMAT0000024 cel-miR-53 185487 F39B2.5 ucgugccuUUGUUUACAUGCCCac | |:||| |||||| ugaauuauAUCGAAU-UACGGGgu 3 17 13 35 [ce6:I:14775207-14775229:-] 0.5730 134 0 -14.37 -0.3237 MIMAT0000025 cel-miR-54 185487 F39B2.5 gaGCCUAAUACUUC-UAAUGCCCau :| ||||| | |||||||| uuUGAAUUAUAUCGAAUUACGGGgu 3 23 11 35 [ce6:I:14775207-14775231:-] 0.5730 145 0 -16.49 -0.3422 MIMAT0000026 cel-miR-55 185487 F39B2.5 gagucgucuuugaauAUGCCCau |||||| ugaauuauaucgaauUACGGGgu 3 9 13 35 [ce6:I:14775207-14775229:-] 0.5730 120 0 -10.45 -0.3478 MIMAT0000028 cel-miR-56 185487 F39B2.5 gagucgccuuugUAAUGCCCau |||||||| gaauuauaucgaAUUACGGGgu 3 11 14 35 [ce6:I:14775207-14775228:-] 0.5730 130 0 -13.89 -0.3422 MIMAT0000029 cel-miR-57 185487 F39B2.5 ugugugucgAGCUAGAUGUCCCAu |||| :|||:|||| ugaauuauaUCGAAUUACGGGGUu 2 16 13 36 [ce6:I:14775206-14775229:-] 0.5730 147 0 -20.92 -0.1242 MIMAT0000044 cel-miR-72 185487 F39B2.5 agucgaUACGGUUG-UAGAA-CGGa |||:|:|| ||||| ||| uagaaaAUGUCGACAAUCUUCGCCc 2 18 253 277 [ce6:I:14774965-14774989:-] 0.4063 132 0 -21.96 -0.4853 MIMAT0000045 cel-miR-73 185487 F39B2.5 ugacUUGACGGAUG-UAGAA-CGGu || ||:| || ||||| ||| uagaAAAUGUCGACAAUCUUCGCCc 2 20 253 277 [ce6:I:14774965-14774989:-] 0.4063 130 0 -15.36 -0.4887 MIMAT0000305 cel-miR-249 185487 F39B2.5 ccgUUGCGAGUUUUCAGGACAcu ||: ||| :: |||||| aaaAAUUGUCACGGAUCCUGUuu 3 21 114 136 [ce6:I:14775106-14775128:-] 0.5730 136 0 -11.28 -0.1536 MIMAT0000699 cel-miR-357 185487 F39B2.5 ugaggacguugcuGACCGUAAAu | ||||||| agaauaauuuuuuCAGGCAUUUa 2 11 232 254 [ce6:I:14774988-14775010:-] 0.4063 142 7 -10.99 -0.9397

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score F39B2.5 RAID00400011 cel-miR-54-3p miRNA MIMAT0000025 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID00644191 cel-miR-55-3p miRNA MIMAT0000026 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID01894615 cel-miR-357-3p miRNA MIMAT0000699 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID02658825 cel-miR-72-5p miRNA MIMAT0000044 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID02737106 cel-miR-249-3p miRNA MIMAT0000305 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID03055079 cel-miR-51-5p miRNA MIMAT0000022 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID03150204 cel-miR-57-5p miRNA MIMAT0000029 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID03365637 cel-miR-52-5p miRNA MIMAT0000023 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID03454763 cel-miR-56-3p miRNA MIMAT0000028 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID03494094 cel-miR-73-3p miRNA MIMAT0000045 F39B2.5 mRNA 185487 Prediction 0.1828 F39B2.5 RAID03592572 cel-miR-53-5p miRNA MIMAT0000024 F39B2.5 mRNA 185487 Prediction 0.1828