DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015099 cel-miR-51* 186213 F54B11.5 acGUGGACAUGGACGAAGGUAc :|::| ||::| |||||| guUAUUUUUAUUU-AUUCCAUu 2 21 99 119 [ce6:X:13594371-13594391:-] 0.4860 126 6 -9.95 -0.1530 MIMAT0015116 cel-miR-240* 186213 F54B11.5 guaaGAUCAGAGUUUUAG-GAGc |||| ||| ||||| ||| ucaaCUAG-CUCCAAAUCUCUCu 2 19 13 34 [ce6:X:13594456-13594477:-] 0.4312 132 0 -16.12 -0.1149 MIMAT0015118 cel-miR-244* 186213 F54B11.5 aggaaAUCGACU--UUUCGU-CAu || |||| |||||| || guaaaUAUCUGAAUAAAGCACGU- 2 17 415 437 [ce6:X:13594053-13594075:-] 0.4758 123 0 -9.79 -1.1324 MIMAT0000313 cel-miR-258 186213 F54B11.5 uuuuccUAAGGA---GAGUUUUGg |||: | :||||||| uauuccAUUUAUAAGUUCAAAACu 2 16 111 134 [ce6:X:13594356-13594379:-] 0.5196 142 7 -11.53 -1.1610 MIMAT0015240 cel-miR-788* 186213 F54B11.5 gcuaAGAUUAGGUAAAgg |:|| ||||||| uuuaUUUAUUCCAUUUau 3 15 105 122 [ce6:X:13594368-13594385:-] 0.5196 138 0 -8.69 -0.1454 MIMAT0015240 cel-miR-788* 186213 F54B11.5 gcUAAGAUUAG-GUAAAGg |||:| || |||||| ugAUUUUUCUCACAUUUCu 2 17 58 76 [ce6:X:13594414-13594432:-] 0.4524 124 6 -14.52 -0.5996 MIMAT0005031 cel-miR-1018 186213 F54B11.5 gacAUUCAGGUUACUAGAGAGa ||: ||||| ||||||| aacUAGCUCCAA--AUCUCUCu 2 20 15 34 [ce6:X:13594456-13594475:-] 0.4312 160 7 -17.78 -0.2511 MIMAT0005523 cel-miR-1022 186213 F54B11.5 cuaccGCAGGAUUGUUACUAGAa :|| :| | |||||| | uuuuuUGUAUUCA-AAUGAUGUa 2 19 379 400 [ce6:X:13594090-13594111:-] 0.6246 120 0 -6.02 -0.1369 MIMAT0006591 cel-miR-1824 186213 F54B11.5 uucaacccccucuuUGUGACGGu :||||||| uagaaauuauuuuuGCACUGCCg 2 10 318 340 [ce6:X:13594150-13594172:-] 0.6246 141 7 -15.16 -0.7035 MIMAT0011450 cel-miR-1832b 186213 F54B11.5 uagucgcuuAGCGAGACGG-GUGa |:|| ||||| ||| aaauuauuuUUGCACUGCCGCACu 2 15 321 344 [ce6:X:13594146-13594169:-] 0.6246 122 0 -18.61 -0.8587 MIMAT0011454 cel-miR-2209b 186213 F54B11.5 acUUCGUGUUGGC-GAGUAGAGa || : ||| :| :||| ||| caAAUUCCAAAUGUUUCAACUCa 2 21 354 376 [ce6:X:13594114-13594136:-] 0.6246 123 0 -8.69 -0.1262 MIMAT0011460 cel-miR-2219 186213 F54B11.5 gaAGUCGAAA-GGGA--GCGUGAAGc |:| :||| | || |||||||| aaUUAUUUUUGCACUGCCGCACUUCu 2 22 322 347 [ce6:X:13594143-13594168:-] 0.6246 159 7 -16.05 -0.4290 MIMAT0000005 cel-miR-34 186213 F54B11.5 guUGGUCGAUUGGUGUGACGGa |::| :| :::||||||| aaAUUAUUU--UUGCACUGCCg 2 21 321 340 [ce6:X:13594150-13594169:-] 0.6246 145 7 -13.98 -0.6960 MIMAT0000058 cel-miR-85 186213 F54B11.5 cgugcugaaaaguuUAUGAAACAu ||||||||| uauucaaaugauguAUACUUUGUu 2 11 386 409 [ce6:X:13594081-13594104:-] 0.6246 150 7 -12.95 -1.2298 MIMAT0000302 cel-miR-246 186213 F54B11.5 cgaggaugggcuuuGUACAUu |||||| guauacuuuguuacCAUGUAa 2 8 398 418 [ce6:X:13594072-13594092:-] 0.5502 120 6 -10.38 -0.2554

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score F54B11.5 RAID00179737 cel-miR-85-3p miRNA MIMAT0000058 F54B11.5 mRNA 186213 Prediction 0.1828 F54B11.5 RAID01814414 cel-miR-246-3p miRNA MIMAT0000302 F54B11.5 mRNA 186213 Prediction 0.2202 F54B11.5 RAID02508721 cel-miR-34-5p miRNA MIMAT0000005 F54B11.5 mRNA 186213 Prediction 0.1828