DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015112 cel-miR-229* 179538 math-33 gaUACUGUGGGCUAUGGAAAGa | |::: |:|: ||||||| aaAAGGUG-CUGGCACCUUUCa 2 21 319 339 [ce6:V:11118449-11118469:+] 0.5019 150 7 -16.03 -0.1626 MIMAT0015112 cel-miR-229* 179538 math-33 gaUACUGUGGGCUAUGGAAAGa | |::: |:|: ||||||| aaAAGGUG-CUGGCACCUUUCa 2 21 319 339 [ce6:V:11118449-11118469:+] 0.5019 150 7 -16.03 -0.1696 MIMAT0015119 cel-miR-247* 179538 math-33 ccauuaAUCUUUGA-AAAGAGAu |: || || ||||||| ucccugUGCAAUCUCUUUCUCUc 2 17 38 60 [ce6:V:11118168-11118190:+] 0.5019 151 7 -7.25 -0.4648 MIMAT0015119 cel-miR-247* 179538 math-33 ccauuaaucuuuGA-AAAGAGAu || ||||||| aucucuuucucuCUAUUUCUCUc 2 11 48 70 [ce6:V:11118178-11118200:+] 0.5019 141 7 -7.98 -0.6319 MIMAT0015119 cel-miR-247* 179538 math-33 ccauuaAUCUUUGA-AAAGAGAu |: || || ||||||| ucccugUGCAAUCUCUUUCUCUc 2 17 38 60 [ce6:V:11118168-11118190:+] 0.5019 151 7 -7.25 -0.4782 MIMAT0015119 cel-miR-247* 179538 math-33 ccauuaaucuuuGA-AAAGAGAu || ||||||| aucucuuucucuCUAUUUCUCUc 2 11 48 70 [ce6:V:11118178-11118200:+] 0.5019 141 7 -7.98 -0.6466 MIMAT0005032 cel-miR-1019 179538 math-33 gaccuuUCGUUACACCUUAAUGUc | :| | | ||||||| acuauuAUUAUUUUUAAAUUACAu 2 19 151 174 [ce6:V:11118281-11118304:+] 0.5019 146 7 -3.64 -1.1191 MIMAT0005032 cel-miR-1019 179538 math-33 gaccuuUCGUUACACCUUAAUGUc | :| | | ||||||| acuauuAUUAUUUUUAAAUUACAu 2 19 151 174 [ce6:V:11118281-11118304:+] 0.5019 146 7 -3.64 -1.1278 MIMAT0011426 cel-miR-2207* 179538 math-33 acacacguaacucGGACACGUa |||||||| uuucuuuccucucCCUGUGCAa 2 10 27 48 [ce6:V:11118157-11118178:+] 0.5019 145 7 -13.66 -0.6608 MIMAT0011426 cel-miR-2207* 179538 math-33 acacacguaacucGGACACGUa |||||||| uuucuuuccucucCCUGUGCAa 2 10 27 48 [ce6:V:11118157-11118178:+] 0.5019 145 7 -13.66 -0.6755 MIMAT0011463 cel-miR-2221 179538 math-33 ugaucgccagaccAUAGUGAac ||||||| uuauaaucauccuUAUCACUau 3 10 134 155 [ce6:V:11118264-11118285:+] 0.5019 125 0 -6.38 -0.1882 MIMAT0011463 cel-miR-2221 179538 math-33 ugaucgccagaccAUAGUGAac ||||||| uuauaaucauccuUAUCACUau 3 10 134 155 [ce6:V:11118264-11118285:+] 0.5019 125 0 -6.38 -0.1953 MIMAT0014446 cel-miR-2953-5p 179538 math-33 uaaAAGUGCUUGU---GAAGACAu | || |||| :|||||| ccaUACAACAACAUUUUUUCUGUa 2 19 384 407 [ce6:V:11118514-11118537:+] 0.5019 133 6 -12.54 -0.1657 MIMAT0014446 cel-miR-2953-5p 179538 math-33 uaaAAGUGCUUGU---GAAGACAu | || |||| :|||||| ccaUACAACAACAUUUUUUCUGUa 2 19 384 407 [ce6:V:11118514-11118537:+] 0.5019 133 6 -12.54 -0.1729 MIMAT0000032 cel-miR-60 179538 math-33 acuugaUCUUUU----ACACGUAUUAu |||||| | | |||||| gcccgaAGAAAACUUUUAUACAUAAU- 2 18 573 598 [ce6:V:11118703-11118728:+] 0.5002 124 6 -5.15 -0.1504 MIMAT0000290 cel-miR-235 179538 math-33 aguccggccccucuCACGUUAu ||||||| ucuuuccucucccuGUGCAAUc 2 9 29 50 [ce6:V:11118159-11118180:+] 0.5019 140 7 -9.47 -0.5165 MIMAT0000290 cel-miR-235 179538 math-33 aguccggccccucuCACGUUAu ||||||| ucuuuccucucccuGUGCAAUc 2 9 29 50 [ce6:V:11118159-11118180:+] 0.5019 140 7 -9.47 -0.5305 MIMAT0000291 cel-miR-236 179538 math-33 ucgcAGUAAUGGACU-GUCAUAAu |||| ||| | || |||| auaaUCAU--CCUUAUCACUAUUa 2 20 136 157 [ce6:V:11118266-11118287:+] 0.5019 123 0 -8.48 -0.1429 MIMAT0000291 cel-miR-236 179538 math-33 ucgcAGUAAUGGACU-GUCAUAAu |||| ||| | || |||| auaaUCAU--CCUUAUCACUAUUa 2 20 136 157 [ce6:V:11118266-11118287:+] 0.5019 123 0 -8.48 -0.1485 MIMAT0000749 cel-lsy-6 179538 math-33 gcUUUACGCAGAGUAUGUUUu :|| | |:|:||||| | aaGAAAAC-UUUUAUACAUAa 2 20 578 597 [ce6:V:11118708-11118727:+] 0.5002 121 0 -8.54 -0.1424

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score math-33 RAID01401118 cel-miR-235-3p miRNA MIMAT0000290 math-33 mRNA 179538 Prediction 0.2381 math-33 RAID01704417 cel-miR-236-3p miRNA MIMAT0000291 math-33 mRNA 179538 Prediction 0.1828 math-33 RAID01744191 cel-miR-60-3p miRNA MIMAT0000032 math-33 mRNA 179538 Prediction 0.1828 math-33 RAID01895181 cel-miR-83-3p miRNA MIMAT0000056 math-33 mRNA 179538 Prediction 0.1828 math-33 RAID01922930 cel-miR-71-5p miRNA MIMAT0000043 math-33 mRNA 179538 Prediction 0.1828 math-33 RAID03899836 cel-lsy-6-3p miRNA MIMAT0000749 math-33 mRNA 179538 Prediction 0.1828