DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015110 cel-miR-84* 181603 H40L08.1 cggcucaaucaacuuuGUAACAc |||||| ---aacuaaaacguguCAUUGUg 2 8 1 20 [ce6:X:15080950-15080969:-] 0.6255 120 6 -10.95 -0.2793 MIMAT0000324 cel-miR-268 181603 H40L08.1 ugGUUUGACGAAGAUUAAGAACGg ||||: || | ||||| | acCAAAUAAAUUAUUUUUCUUACu 2 23 245 268 [ce6:X:15080702-15080725:-] 0.5000 126 0 -10.53 -0.1763 MIMAT0005522 cel-miR-1021 181603 H40L08.1 ggcuccuaaAGUGUACUAGAGUGAa |:|: | |||:||| ccaaauaaaUUAU-UUUUCUUACU- 2 17 246 268 [ce6:X:15080702-15080724:-] 0.5000 126 0 -7.14 -0.1362 MIMAT0006587 cel-miR-1820 181603 H40L08.1 cuuguaguagcuuuuuGUUAGUUUu :||||||| uuauuuauuucuaccuUAAUCAAAc 2 10 174 198 [ce6:X:15080772-15080796:-] 0.5000 141 7 -5.37 -1.0856 MIMAT0006588 cel-miR-1821 181603 H40L08.1 gauggauUGAUA-UUCUGGAGu |:|:| |||||||: uuaaaauAUUGUAAAGACCUUa 2 15 155 176 [ce6:X:15080794-15080815:-] 0.5000 137 0 -15.25 -0.4472 MIMAT0006591 cel-miR-1824 181603 H40L08.1 uucaacccccucuuuGUGACGgu |||||| aaucaaacaaauuuuCACUGCga 3 9 191 213 [ce6:X:15080757-15080779:-] 0.5000 120 0 -9.71 -0.2124 MIMAT0011425 cel-miR-2207 181603 H40L08.1 gaAUAUGUGUCAGAGUUAAGUgu | || || :| |||||| uuUUUAGCCAAGUUGAAUUCAaa 3 22 110 132 [ce6:X:15080838-15080860:-] 0.5000 133 0 -9.24 -0.1438 MIMAT0011438 cel-miR-2211 181603 H40L08.1 aaaGAGGAGAUUUAAGAUGGAcu ||: |:| | |||||||| gacCUUAUUU-AUUUCUACCUua 3 21 170 191 [ce6:X:15080779-15080800:-] 0.5000 142 0 -14.35 -0.3414 MIMAT0011447 cel-miR-2216 181603 H40L08.1 cggauggcuGAAU-UUUACACg :||: ||||||| gucauuuuuUUUGUAAAUGUGa 2 13 67 88 [ce6:X:15080882-15080903:-] 0.5000 143 7 -9.79 -1.1738 MIMAT0011448 cel-miR-2216* 181603 H40L08.1 uccGUGUA-AAAUUCAUCUAuc |:::| ||: |||||| aaaCGUGUCAUUGUGUAGAUuu 3 19 6 27 [ce6:X:15080943-15080964:-] 0.6255 129 0 -9.58 -0.1275 MIMAT0011453 cel-miR-2209b* 181603 H40L08.1 cuuccucuucuCAACAAUGUGa | |||||||: uucaaauuuuuGAUGUUACAUu 2 12 127 148 [ce6:X:15080822-15080843:-] 0.5000 131 0 -9.50 -0.1060 MIMAT0011458 cel-miR-2218b* 181603 H40L08.1 agaGUGAUGUUUG-AUGUUUAAa :|| :|| | ||||||| uucUACCUUAAUCAAACAAAUUu 2 20 182 204 [ce6:X:15080766-15080788:-] 0.5000 146 7 -9.18 -1.0635 MIMAT0011458 cel-miR-2218b* 181603 H40L08.1 agagugauguuugauGUUUAAa |||||| uagccaaguugaauuCAAAUUu 2 8 114 135 [ce6:X:15080835-15080856:-] 0.5000 120 6 -7.43 -0.1044 MIMAT0000001 cel-let-7 181603 H40L08.1 uuGAUAUGUUGGAUGAUGGAGu :||| :| :| ||||||: ccUUAUUUA--UUUCUACCUUa 2 21 172 191 [ce6:X:15080779-15080798:-] 0.5000 133 0 -13.64 -0.3498 MIMAT0000004 cel-miR-2 181603 H40L08.1 cguguaguuucgaccgACACUAu |||||| ucauuuuuuuuguaaaUGUGAUg 2 8 68 90 [ce6:X:15080880-15080902:-] 0.5000 120 6 -11.96 -0.1412 MIMAT0000005 cel-miR-34 181603 H40L08.1 guuGGUCGAUU-GGUGUGACGga | | | || :: |||||| aauCAAACAAAUUUUCACUGCga 3 20 191 213 [ce6:X:15080757-15080779:-] 0.5000 126 0 -11.40 -0.2047 MIMAT0000014 cel-miR-43 181603 H40L08.1 cgcugucguucauuugACACUAu |||||| ucauuuuuuuuguaaaUGUGAUg 2 8 68 90 [ce6:X:15080880-15080902:-] 0.5000 120 6 -11.24 -0.1398 MIMAT0000019 cel-miR-48 181603 H40L08.1 agcGUAGAUGACUCGGAUGGAGu :||:||:| :||||||: ccuUAUUUAUU---UCUACCUUa 2 21 172 191 [ce6:X:15080779-15080798:-] 0.5000 136 0 -17.04 -0.3414 MIMAT0000035 cel-miR-63 181603 H40L08.1 aaagguugagcgaaguCACAGUAu ||||||| -------aacuaaaacGUGUCAUu 2 9 1 17 [ce6:X:15080953-15080969:-] 0.6255 140 7 -11.41 -1.3102 MIMAT0000036 cel-miR-64 181603 H40L08.1 aagccauugcgaaguCACAGUAu ||||||| ------aacuaaaacGUGUCAUu 2 9 1 17 [ce6:X:15080953-15080969:-] 0.6255 140 7 -11.19 -1.3090 MIMAT0000037 cel-miR-65 181603 H40L08.1 aagccaaugcgaaguCACAGUAu ||||||| ------aacuaaaacGUGUCAUu 2 9 1 17 [ce6:X:15080953-15080969:-] 0.6255 140 7 -11.19 -1.3096 MIMAT0000038 cel-miR-66 181603 H40L08.1 aguguaggGAUUAGUCACAGUAc |||| ||||||| ------aaCUAAAACGUGUCAUu 2 16 1 17 [ce6:X:15080953-15080969:-] 0.6255 151 7 -11.50 -1.3077 MIMAT0000057 cel-miR-84 181603 H40L08.1 auguuAUAAUGUAUGAUGGAGu |||| | ||||||: gaccuUAUUUAUUUCUACCUUa 2 18 170 191 [ce6:X:15080779-15080800:-] 0.5000 137 0 -15.02 -0.3386 MIMAT0000283 cel-miR-228 181603 H40L08.1 ggcacUUAAGUACGUCACGGUAa || | | | |||:||| -----AACUAAAAC-GUGUCAUu 2 19 1 17 [ce6:X:15080953-15080969:-] 0.6255 128 0 -10.02 -0.1068 MIMAT0000284 cel-miR-229 181603 H40L08.1 gcuaccuUUUCUAUUGGUCACAGUAa || | ||| ||||||| -------AACUAAAAC--GUGUCAUu 2 20 1 17 [ce6:X:15080953-15080969:-] 0.6255 148 7 -11.01 -1.3033 MIMAT0000297 cel-miR-241 181603 H40L08.1 aguAAAGAGCGUGGAUGGAGu || :|: : :||||||: accUUAUUUAUUUCUACCUUa 2 19 171 191 [ce6:X:15080779-15080799:-] 0.5000 134 0 -14.05 -0.3442 MIMAT0000300 cel-miR-244 181603 H40L08.1 guaugguGAAACAUGUUGGUUUcu :| ||| ||||||| guuggguUUAUGUUAAACCAAAua 3 18 229 252 [ce6:X:15080718-15080741:-] 0.5000 137 0 -9.77 -0.2770 MIMAT0000306 cel-miR-250 181603 H40L08.1 acgguugucaacugACACUAa |||||| auuuuuuuuguaaaUGUGAUg 2 8 70 90 [ce6:X:15080880-15080900:-] 0.5000 120 6 -6.99 -0.1398 MIMAT0000308 cel-miR-252 181603 H40L08.1 aaUGGACGCCGUGAUGAU-GAAUa |||| :|:| ||| |||| agACCUUAUUUAUUUCUACCUUAa 2 22 169 192 [ce6:X:15080778-15080801:-] 0.5000 121 0 -10.56 -1.2108 MIMAT0000697 cel-miR-355 181603 H40L08.1 guaucgaguccgauUUUGUUu |||||| uuucuaccuuaaucAAACAAa 2 8 181 201 [ce6:X:15080769-15080789:-] 0.5000 120 6 -6.21 -0.3134 MIMAT0004230 cel-miR-795 181603 H40L08.1 uucGAGCGACUAGUUAGAUGGAGu ||: :| ||: |||||||: gacCUUAUUUAUU--UCUACCUUa 2 22 170 191 [ce6:X:15080779-15080800:-] 0.5000 138 0 -14.07 -0.3414 MIMAT0004232 cel-miR-797 181603 H40L08.1 agaagAGUAACACUAAC---GACACUAu ||||| | ||| |||||| uuaagUCAUUUUUUUUGUAAAUGUGAUg 2 21 63 90 [ce6:X:15080880-15080907:-] 0.5000 127 6 -13.13 -0.1331

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score H40L08.1 RAID00224488 cel-miR-797-5p miRNA MIMAT0004232 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID00445705 cel-let-7-5p miRNA MIMAT0000001 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID01105896 cel-miR-48-5p miRNA MIMAT0000019 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID01405112 cel-miR-355-5p miRNA MIMAT0000697 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID01707050 cel-miR-34-5p miRNA MIMAT0000005 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID01941039 cel-miR-84-5p miRNA MIMAT0000057 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID02117314 cel-miR-241-5p miRNA MIMAT0000297 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID02642017 cel-miR-64-5p miRNA MIMAT0000036 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID02758742 cel-miR-228-5p miRNA MIMAT0000283 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03007283 cel-miR-252-5p miRNA MIMAT0000308 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03102412 cel-miR-65-5p miRNA MIMAT0000037 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03113257 cel-miR-244-5p miRNA MIMAT0000300 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03179943 cel-miR-250-3p miRNA MIMAT0000306 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03207014 cel-miR-229-5p miRNA MIMAT0000284 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03246615 cel-miR-63-3p miRNA MIMAT0000035 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03417600 cel-miR-795-5p miRNA MIMAT0004230 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03538690 cel-miR-66-5p miRNA MIMAT0000038 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03711372 cel-miR-2-3p miRNA MIMAT0000004 H40L08.1 mRNA 181603 Prediction 0.1828 H40L08.1 RAID03978030 cel-miR-43-3p miRNA MIMAT0000014 H40L08.1 mRNA 181603 Prediction 0.1828