DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015097 cel-miR-47* 179445 cash-1 ugACAGUUAUCUGA-CGAG-AGAa | |::|| ||:| |||| ||| gaUAUUGAUUGAUUAGCUCAUCUu 2 21 449 472 [ce6:V:10365600-10365623:+] 0.6048 127 0 -13.03 -1.0590 MIMAT0015104 cel-miR-63* 179445 cash-1 acUGAUGGCUGC-UCAAUCu |:|| || || |||||| auAUUA-CGUCGCAGUUAGc 2 18 312 330 [ce6:V:10365463-10365481:+] 0.4702 123 6 -13.25 -0.3375 MIMAT0015112 cel-miR-229* 179445 cash-1 gaUACUGUGGG-CUAU-GGAAAGa || | |:: |||| |||||| cuAUUUCUCUUAGAUACCCUUUCu 2 21 501 524 [ce6:V:10365652-10365675:+] 0.6048 123 6 -17.71 -0.5684 MIMAT0015119 cel-miR-247* 179445 cash-1 ccauuaaucuuuGA-AAAGAGAu || ||||||| cgacucguguucCUAUUUCUCUu 2 11 489 511 [ce6:V:10365640-10365662:+] 0.6048 141 7 -7.56 -0.9622 MIMAT0000313 cel-miR-258 179445 cash-1 uuuucCUAAGG--AGAGUUUUGg | |||| ||||||||| gcauuGUUUCCAUUCUCAAAACg 2 17 546 568 [ce6:V:10365697-10365719:+] 0.6048 159 7 -13.60 -0.6303 MIMAT0000695 cel-miR-353 179445 cash-1 uuAUGGUUGUGUACCGUUAAc | :||:::: ||||||| caUUUCAGUGUUGGGCAAUUg 2 20 796 816 [ce6:V:10365947-10365967:+] 0.5000 151 7 -17.07 -0.2051 MIMAT0000698 cel-miR-356 179445 cash-1 acUAAACAAGCG-CAA-CGAGUu ||| |||| ||| ||||| auAUUACGUCGCAGUUAGCUCAa 2 20 312 334 [ce6:V:10365463-10365485:+] 0.4702 126 0 -17.04 -0.6859 MIMAT0015240 cel-miR-788* 179445 cash-1 gcuAAGAUUAGGUAAAGg ||||| ||||||| cacUUCUA--CCAUUUCa 2 16 787 802 [ce6:V:10365938-10365953:+] 0.5000 152 7 -11.66 -0.9581 MIMAT0004228 cel-miR-793 179445 cash-1 agacagAUUGAUUCUAU-GGAGu |||| ||||| |||| aaucaaUAAC-CAGAUAUCCUCg 2 17 578 599 [ce6:V:10365729-10365750:+] 0.6048 122 0 -14.67 -0.9783 MIMAT0006587 cel-miR-1820 179445 cash-1 cuUGUAGUAGCUUUUUGUUAGUUuu | | |: : |: :|||||| ucAAAACGCUUAGUUUUAAUCAAua 3 24 561 585 [ce6:V:10365712-10365736:+] 0.6048 123 0 -6.93 -0.1166 MIMAT0015267 cel-miR-1829a* 179445 cash-1 auGUUUG--UU-AAUCUUCAGGGGAa :|||| || ||| ||||||| ucUAAACGUAAUUUAUCUGUCCCCUc 2 22 192 217 [ce6:V:10365343-10365368:+] 0.4819 155 7 -17.95 -0.7167 MIMAT0006771 cel-miR-1829c 179445 cash-1 auguuGGUAGAACU-UAAAGCGaa |:||:|| | ||||||| uuuccCUAUUUUCAUAUUUCGCca 3 19 28 51 [ce6:V:10365179-10365202:+] 0.4935 145 0 -13.18 -0.3027 MIMAT0011428 cel-miR-2208a* 179445 cash-1 acuucaUAUGGUCUUUGACGUa || |: |||||||| uagcucAU-CUUUAAACUGCAc 2 17 462 482 [ce6:V:10365613-10365633:+] 0.6048 146 7 -10.54 -1.1409 MIMAT0011430 cel-miR-2208b-3p 179445 cash-1 acuucACA-UGGUUUUAGACGUa ||| | | |||||||| acacuUGUCAACCUAAUCUGCAa 2 18 281 303 [ce6:V:10365432-10365454:+] 0.4702 152 7 -13.95 -0.9072 MIMAT0011448 cel-miR-2216* 179445 cash-1 uccguGUAAAAU-UCAUCUAUc :|||||| ||||||| cccuuUAUUUUAUUGUAGAUAa 2 17 148 169 [ce6:V:10365299-10365320:+] 0.4935 159 7 -10.62 -1.1609 MIMAT0011455 cel-miR-2218a 179445 cash-1 acuccgaAUUUUGAACAUCAAAc |:|:| || |||||| aaauuacUGAGAAUUCUAGUUUg 2 17 738 760 [ce6:V:10365889-10365911:+] 0.5554 132 6 -12.29 -0.1528 MIMAT0011456 cel-miR-2218a* 179445 cash-1 auguUUGAUGUGAUAAGAC-CGGa |: ||| || ||||| ||| ucuuAGAUACCCU-UUCUGCGCCa 2 20 508 530 [ce6:V:10365659-10365681:+] 0.6048 125 0 -13.51 -1.1566 MIMAT0011458 cel-miR-2218b* 179445 cash-1 agAGU-GAUGUUUGA--UGUUUAAa ||| || :||||| ||||||| gcUCAUCUUUAAACUGCACAAAUUu 2 21 464 488 [ce6:V:10365615-10365639:+] 0.6048 166 7 -18.53 -0.4835 MIMAT0011458 cel-miR-2218b* 179445 cash-1 agAGUGAUGUUUGAUGU-UUAAa |::| ||:|| |||| |||| uuUUGC-ACGAA-UACAGAAUUu 2 21 764 784 [ce6:V:10365915-10365935:+] 0.5060 124 0 -8.54 -0.8109 MIMAT0000026 cel-miR-55 179445 cash-1 gagucguCUUUGAA-UA-UGCCCAu ||||:|| || |||||| uaaauauGAAAUUUGAUCACGGGUc 2 17 240 264 [ce6:V:10365391-10365415:+] 0.4702 131 6 -16.27 -0.8402 MIMAT0000059 cel-miR-86 179445 cash-1 cugacaccgUUUCGUAAGUGAAu :|| : ||||||| acgaauacaGAAUUUUUCACUUc 2 15 770 792 [ce6:V:10365921-10365943:+] 0.5030 146 7 -9.30 -0.8294 MIMAT0000059 cel-miR-86 179445 cash-1 cugacacCGUUUCGUAAGUGAAu |:| ||||||:|| ------aGUAUCCCAUUCAUUUu 2 17 1 17 [ce6:V:10365152-10365168:+] 0.4935 136 0 -10.83 -0.1015 MIMAT0004215 cel-miR-253 179445 cash-1 ggAAGGGU---GUUGCGGAUG-AUu | |||| | |||||||| || caUGCCCAAAUCCACGCCUACAUAc 2 20 98 122 [ce6:V:10365249-10365273:+] 0.4935 126 0 -20.47 -0.4301 MIMAT0000697 cel-miR-355 179445 cash-1 guaucgAGUCCGAUUUUGUUu ||:||:|||||||| uacaaaUCGGGUUAAAACAAu 2 16 422 442 [ce6:V:10365573-10365593:+] 0.6048 167 7 -19.20 -0.8940 MIMAT0000749 cel-lsy-6 179445 cash-1 gcuuuacgcagagUAUGUUUu ||||||| ugaaacaacaccgAUACAAAu 2 9 408 428 [ce6:V:10365559-10365579:+] 0.6048 140 7 -7.11 -0.2723 MIMAT0004220 cel-miR-785 179445 cash-1 agaUGUGUUUUGUUAAGUGAAu |:|||:||: ||||||| cgaAUACAGAAUUUUUCACUUc 2 20 771 792 [ce6:V:10365922-10365943:+] 0.5030 167 7 -17.50 -0.8187 MIMAT0004220 cel-miR-785 179445 cash-1 agauguguuuuGUUAAGUGAAu | |||||:|| -----aguaucCCAUUCAUUUu 2 12 1 17 [ce6:V:10365152-10365168:+] 0.4935 131 0 -5.95 -0.1025

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score cash-1 RAID00617129 cel-miR-55-3p miRNA MIMAT0000026 cash-1 mRNA 179445 Prediction 0.1828 cash-1 RAID00628016 cel-miR-355-5p miRNA MIMAT0000697 cash-1 mRNA 179445 Prediction 0.2202 cash-1 RAID01046609 cel-miR-253-3p miRNA MIMAT0004215 cash-1 mRNA 179445 Prediction 0.1828 cash-1 RAID01187451 cel-miR-86-5p miRNA MIMAT0000059 cash-1 mRNA 179445 Prediction 0.1828 cash-1 RAID02256874 cel-miR-785-3p miRNA MIMAT0004220 cash-1 mRNA 179445 Prediction 0.1828 cash-1 RAID03359917 cel-lsy-6-3p miRNA MIMAT0000749 cash-1 mRNA 179445 Prediction 0.1828