DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015111 cel-miR-124* 176813 K08E3.4 ugauuUCAGUGAUCCCACGUAcg | |: :|| |||||| ccauuACUUUUUA-UGUGCAUuu 3 19 119 140 [ce6:III:13759361-13759382:-] 0.5826 124 0 -8.95 -0.1053 MIMAT0015119 cel-miR-247* 176813 K08E3.4 ccauuAAUCUUUG-AAAAGAGau ||| : :| ||||||| acuuuUUAUGUGCAUUUUCUCcg 3 18 124 146 [ce6:III:13759355-13759377:-] 0.5328 132 0 -6.47 -0.1730 MIMAT0015240 cel-miR-788* 176813 K08E3.4 gcuAAGAUUAGGUAAAGg ||:| ||||||: uguUUUUUUCCCAUUUUa 2 16 48 65 [ce6:III:13759436-13759453:-] 0.5826 131 0 -7.38 -0.1535 MIMAT0011426 cel-miR-2207* 176813 K08E3.4 acacacgUAACUCGGACACGUa ||| | :|||||| uuuacuaAUUUA--UUGUGCAa 2 16 28 47 [ce6:III:13759454-13759473:-] 0.5826 128 6 -8.68 -0.4184 MIMAT0011426 cel-miR-2207* 176813 K08E3.4 acacacguaacucggACACGUa |||||| uaccauuacuuuuuaUGUGCAu 2 8 117 138 [ce6:III:13759363-13759384:-] 0.5826 120 6 -9.92 -0.2545 MIMAT0011444 cel-miR-2214 176813 K08E3.4 uugcggccaGUUCAACAACA-GUUAc :|| || |||| |||| cuuuuuuacUAAUUUAUUGUGCAAUg 2 17 24 49 [ce6:III:13759452-13759477:-] 0.5826 124 0 -8.72 -1.2812 MIMAT0000285 cel-miR-230 176813 K08E3.4 agaggaccagcguguUGAUUAug |||||| uaaccguucuuuuuuACUAAUuu 3 9 16 38 [ce6:III:13759463-13759485:-] 0.5826 120 0 -7.23 -0.2076 MIMAT0000287 cel-miR-232 176813 K08E3.4 agUGGCGUCAAUUCUACGUAAAu |:: | || | :||||||| ccAUUACUUUUUAUGUGCAUUUu 2 22 119 141 [ce6:III:13759360-13759382:-] 0.5826 153 7 -8.89 -0.9333 MIMAT0000290 cel-miR-235 176813 K08E3.4 aguccggccccucuCACGUUAu ||||||| uuuacuaauuuauuGUGCAAUg 2 9 28 49 [ce6:III:13759452-13759473:-] 0.5826 140 7 -9.21 -1.2535 MIMAT0000305 cel-miR-249 176813 K08E3.4 ccGUUGCGAGUUUUCAGGACAcu | |: ||| | |||||| ucCCAUUCUCCCACUUCCUGUaa 3 22 87 109 [ce6:III:13759392-13759414:-] 0.5826 133 0 -10.33 -0.2014 MIMAT0000700 cel-miR-358 176813 K08E3.4 cuggaacugucccUAUGGUua |||||| ccuguaauuuauuAUACCAuu 3 9 103 123 [ce6:III:13759378-13759398:-] 0.5826 120 0 -7.37 -0.1587 MIMAT0004219 cel-miR-784 176813 K08E3.4 agaugcaugcgucUAACACGgu ||||||| uuuuuacuaauuuAUUGUGCaa 3 10 26 47 [ce6:III:13759454-13759475:-] 0.5826 125 0 -11.44 -0.3496

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 dbn-1; CELE_K08E3.4; K08E3.4 cel-let-7 65 90 -UUGAUAUGUUGGAUG--AUGGAGU |||| ||||:| :| |:|||| AAACUCAACAAUCCGCGGUGCCUCC dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-124 68 89 ACCGUAAGU-----GGCG-CACGGAAU ||| |||| |||||| -----CUCAACAAUCCGCGGUGCCUC- dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-228 78 88 GGCACUUAAGUACGUCACGGUAA ||:||||| -----------CGCGGUGCCU-- dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-235 41 51 AGUCCGGCCCCUCUCACGUUAU- |||||||: -------------UGUGCAAUGU dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-264 69 88 GUAUUGUUGUU-GGUGG-GCGG- |||||| ||:| :||| ----UCAACAAUCCGCGGUGCCU dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-265 81 100 -UAUGGUGGGAAGGAGGGAGU :|:|| ||| |:||||| GGUGCCUCCCAUUCUCCCA-- dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-34 69 89 -GUUGGUCGAUUGGUGUGACGGA- |||| ||:|: ||||| UCAACAAU----CCGCGGUGCCUC dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-41 80 100 AUCCACUAAA---AAGUGGGCCACU |||| ||| ||| -CGGUGCCUCCCAUUCUCCCA---- dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-56* 71 101 AUGUUGGGUUUUACCUAGGC------GGU- ||||:||: :|| ||| ||| AACAAUCCGCGGUGCCUCCCAUUCUCCCAC dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-78 66 91 CGUGU-UUGUUGG---UC-CGGAGGU || |||||:| :| |||||| -AACUCAACAAUCCGCGGUGCCUCCC dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-790 77 88 GCGCCACAAGCGCUCACGGUUC |||| ||||| --------CCGCG-GUGCCU-- dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-791 74 88 ACGGAAUAGACGCCUCACGGUUU ||| |||| |||| -----AAUCCGCGG--UGCCU-- dbn-1; CELE_K08E3.4; K08E3.4 cel-let-7 66 89 UUGAUAUGUUGGAUG--AUGGAGu |||| ||||:| :| |:|||| AACTCAACAATCCGCGGTGCCTCc dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-124 70 89 accGUAAGUGGCG-CACGGAau || | |||| |||||| caaCAAT--CCGCGGTGCCTcc dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-228 69 89 ggcacUUAAGUACGUCACGGuaa ||| | ||:||||| tcaacAATCC--GCGGTGCCtcc dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-264 59 81 GUAUUGUU---GUUGGUGGGCGg ||| :|| |||| |:|||| CATTTTAAACTCAACAATCCGCg dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-265 82 101 uAUGGUGGGAAGGAGGGAGu |:|| ||| |:||||| | gTGCCTCCCATTCTCCCACt dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-34 65 87 gUUG-GUCGAUUGGUGUGACGGA ||| || | | ||:|: ||||| aAACTCAACAATCCGCGGTGCCT dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-41 54 85 auccacUAAAA----AGU-----GG-GCCACu ||||| ||| || ||||| tttcccATTTTAAACTCAACAATCCGCGGTGc dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-56* 63 82 augUUGGGUUUUACCUAGGCGgu |||:||| | |||||| ttaAACTCAACA---ATCCGCgg dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-78 70 90 cgUGUUUGUUGGUCCGGAGGu |||| | :| : |||||| caACAATCCGCGGTGCCTCCc dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-790 69 89 gcgccacAAGCGCUCACGGuuc | |||| ||||| tcaacaaTCCGCG-GTGCCtcc dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-791 69 89 acggaaUAGACGCCUCACGGuuu ||| ||| ||||| tcaacaATCCGCG--GTGCCtcc dbn-1; CELE_K08E3.4; K08E3.4 cel-miR-235 42 49 AGUCCGGCCCCUCU---------------------CACGUUAU |||||||: UAGAUAGCCUAACCGUUCUUUUUUACUAAUUUAUUGUGCAAUGU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score dbn-1 RAID00049927 cel-miR-784-5p miRNA MIMAT0004219 dbn-1 mRNA 176813 Prediction 0.1828 dbn-1 RAID01068423 cel-miR-249-3p miRNA MIMAT0000305 dbn-1 mRNA 176813 Prediction 0.1828 dbn-1 RAID01261533 cel-miR-358-3p miRNA MIMAT0000700 dbn-1 mRNA 176813 Prediction 0.1828 dbn-1 RAID01559732 cel-miR-235-3p miRNA MIMAT0000290 dbn-1 mRNA 176813 Prediction 0.2202 dbn-1 RAID01773057 cel-miR-232-3p miRNA MIMAT0000287 dbn-1 mRNA 176813 Prediction 0.1828 dbn-1 RAID03439955 cel-miR-230-3p miRNA MIMAT0000285 dbn-1 mRNA 176813 Prediction 0.1828