DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015119 cel-miR-247* 181647 K09A9.4 ccauuaAUCUUUGAAAAG-AGAu || | |:||||| ||| ucggucUACAUAUUUUUCAUCUc 2 17 40 62 [ce6:X:15595117-15595139:+] 0.5000 124 0 -7.94 -0.9937 MIMAT0000311 cel-miR-256 181647 K09A9.4 augucagAAGAUA-CGUAAGGu |||| | |||||| auacgcaUUCUCUCCCAUUCCa 2 15 143 164 [ce6:X:15595220-15595241:+] 0.5000 121 6 -15.37 -0.1736 MIMAT0000698 cel-miR-356 181647 K09A9.4 acuAAACAAGCGC-AACGAGUu ||| ||:||| ||||||| uuuUUUUUUUGCGAUUGCUCAc 2 19 167 188 [ce6:X:15595244-15595265:+] 0.5000 169 7 -16.54 -1.0210 MIMAT0015239 cel-miR-786* 181647 K09A9.4 cauuuaugggguugacUAUAAGc |||||| -----uuuaauuauuaAUAUUCa 2 8 1 18 [ce6:X:15595078-15595095:+] 0.5000 120 6 -5.40 -0.1014 MIMAT0005822 cel-miR-1019* 181647 K09A9.4 uuuuacuuugagcuuguuACGAGUg |||||| aauuuuuuuuuuugcgauUGCUCAc 2 8 164 188 [ce6:X:15595241-15595265:+] 0.5000 120 6 -15.18 -0.1627 MIMAT0006586 cel-miR-1819 181647 K09A9.4 agguaGUUCGAGUUAGUAAGGu || ||| |||||| auacgCAUUCUCUCCCAUUCCa 2 18 143 164 [ce6:X:15595220-15595241:+] 0.5000 121 6 -15.95 -0.1736 MIMAT0011454 cel-miR-2209b 181647 K09A9.4 acuucGUGU-UGGCGAGUAGAGa :||| |:: :||||||| cggucUACAUAUUUUUCAUCUCc 2 18 41 63 [ce6:X:15595118-15595140:+] 0.5000 152 7 -15.73 -1.0451 MIMAT0000003 cel-miR-1 181647 K09A9.4 augUAUG---AAGA-AAUGUAAGGu |||| |||| | |||||| uaaAUACGCAUUCUCUCCCAUUCCa 2 19 140 164 [ce6:X:15595217-15595241:+] 0.5000 124 6 -15.78 -0.1753 MIMAT0000015 cel-miR-44 181647 K09A9.4 ucGACUUACACAG-AGAUCAGu :| | ||| |: |||||| uaUUCACUGUUUUAACUAGUCa 2 20 13 34 [ce6:X:15595090-15595111:+] 0.5000 122 6 -12.54 -0.1165 MIMAT0000016 cel-miR-45 181647 K09A9.4 ucGACUUACACAG-AGAUCAGu :| | ||| |: |||||| uaUUCACUGUUUUAACUAGUCa 2 20 13 34 [ce6:X:15595090-15595111:+] 0.5000 122 6 -12.54 -0.1165 MIMAT0000033 cel-miR-61 181647 K09A9.4 cuacucauugccaaGAUCAGu |||||| auucacuguuuuaaCUAGUCa 2 8 14 34 [ce6:X:15595091-15595111:+] 0.5000 120 6 -10.69 -0.1201 MIMAT0000060 cel-miR-87 181647 K09A9.4 cguguGGACUUUGAAACGAGUg ::|| :| ||||||| uuuuuUUUGCGA--UUGCUCAc 2 18 169 188 [ce6:X:15595246-15595265:+] 0.5000 142 7 -12.26 -1.0074 MIMAT0000288 cel-miR-233 181647 K09A9.4 ggcguguACGCGUAACGAGUu |||| |||||||| uuuuuuuUGCG-AUUGCUCAc 2 15 169 188 [ce6:X:15595246-15595265:+] 0.5000 156 7 -15.58 -1.0266 MIMAT0000303 cel-miR-247 181647 K09A9.4 ucuucucuuauccgaGAUCAGu |||||| uauucacuguuuuaaCUAGUCa 2 8 13 34 [ce6:X:15595090-15595111:+] 0.5000 120 6 -10.69 -0.1201 MIMAT0004231 cel-miR-796 181647 K09A9.4 aauGAUUGGAGUUGAUGUA-AGGu | ||| ||| ||||| ||| auuCCAAC--CAAGUACAUGUCCu 2 21 108 129 [ce6:X:15595185-15595206:+] 0.5000 125 0 -12.14 -1.0168 MIMAT0004231 cel-miR-796 181647 K09A9.4 aaugauuggaguugauGUAAGGu |||||| aauacgcauucucuccCAUUCCa 2 8 142 164 [ce6:X:15595219-15595241:+] 0.5000 120 6 -15.94 -0.1736

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score usp-33 RAID00209763 cel-miR-44-3p miRNA MIMAT0000015 usp-33 mRNA 181647 Prediction 0.1828 usp-33 RAID00563654 cel-miR-87-3p miRNA MIMAT0000060 usp-33 mRNA 181647 Prediction 0.1828 usp-33 RAID01690444 cel-miR-233-3p miRNA MIMAT0000288 usp-33 mRNA 181647 Prediction 0.1828 usp-33 RAID02234498 cel-miR-247-3p miRNA MIMAT0000303 usp-33 mRNA 181647 Prediction 0.1828 usp-33 RAID02418106 cel-miR-45-3p miRNA MIMAT0000016 usp-33 mRNA 181647 Prediction 0.1828 usp-33 RAID02660943 cel-miR-796 miRNA MIMAT0004231 usp-33 mRNA 181647 Prediction 0.1828 usp-33 RAID02919626 cel-miR-61-3p miRNA MIMAT0000033 usp-33 mRNA 181647 Prediction 0.1828 usp-33 RAID03484946 cel-miR-1-3p miRNA MIMAT0000003 usp-33 mRNA 181647 Prediction 0.1828