DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015091 cel-let-7* 175550 R10E4.1 cauucCAUCUUUUAACGUAUCAAGu | || | || ||| ||| cuuucGAAGUAUUUUUAAUAAUUCa 2 21 153 177 [ce6:III:4272378-4272402:+] 0.5000 120 0 -3.77 -0.1262 MIMAT0015099 cel-miR-51* 175550 R10E4.1 acgUGGACAU--GGACGAAGGUAc | || || || :|||||| auaAGCUUUACCCCCAUUUCCAUg 2 20 10 33 [ce6:III:4272235-4272258:+] 0.5000 134 6 -17.40 -0.1526 MIMAT0015099 cel-miR-51* 175550 R10E4.1 acGUGGACAUGGACGAAGGUAc ||:|| | | |||:||| uuCAUCUUUUAAU-CUUUCAUa 2 21 214 234 [ce6:III:4272439-4272459:+] 0.5000 134 0 -10.78 -0.1216 MIMAT0015107 cel-miR-71* 175550 R10E4.1 cgcUUUUUGUCUU---AUCACUAu || ||: || ||||||| uuuAAUAAUUCAAAUUUAGUGAUa 2 19 166 189 [ce6:III:4272391-4272414:+] 0.5000 145 7 -9.26 -1.2619 MIMAT0015110 cel-miR-84* 175550 R10E4.1 cggcUCAAUCAACUUUGU-AACAc | |||| ||| ||| |||| ucaaAUUUAG-UGAUACAUUUGUa 2 20 175 197 [ce6:III:4272400-4272422:+] 0.5000 129 0 -8.98 -1.2286 MIMAT0015112 cel-miR-229* 175550 R10E4.1 gauacuGUGGGCUA-UGGAAAGa ||:|: | |:||||| gcuuuuCAUCUUUUAAUCUUUCa 2 17 210 232 [ce6:III:4272435-4272457:+] 0.5000 131 0 -11.79 -0.1131 MIMAT0015119 cel-miR-247* 175550 R10E4.1 ccauUAAUCUUUGAAAAG-AGAu ||| | :|||||| ||| uaacAUU-UACGCUUUUCAUCUu 2 19 200 221 [ce6:III:4272425-4272446:+] 0.5000 120 0 -8.54 -1.2028 MIMAT0000698 cel-miR-356 175550 R10E4.1 acuaaacaagcgcaACGAGUu |||||| ucuuucauaauaaaUGCUCAa 2 8 226 246 [ce6:III:4272451-4272471:+] 0.5000 120 6 -8.99 -0.6888 MIMAT0015240 cel-miR-788* 175550 R10E4.1 gcuaAGAU-UAGGUAAAGg |:|| ||||||| aagcUUUACCCCCAUUUCc 2 15 12 30 [ce6:III:4272237-4272255:+] 0.5000 141 7 -12.06 -1.2807 MIMAT0015240 cel-miR-788* 175550 R10E4.1 gcUAA-GAUUAGGUAAAGg ||| | :|||||||: ucAUUCCCUGUCCAUUUUa 2 17 92 110 [ce6:III:4272317-4272335:+] 0.5000 135 0 -10.99 -0.1388 MIMAT0005822 cel-miR-1019* 175550 R10E4.1 uuUUACUUUGAGCUUGUUACGAGUg ||| | : | |||||||| uuAAUCUUUCAUAAUAAAUGCUCAa 2 24 222 246 [ce6:III:4272447-4272471:+] 0.5000 147 7 -11.43 -1.3422 MIMAT0005032 cel-miR-1019 175550 R10E4.1 gacCUUUCGUUACACCUUAAUGUc |||| | | |||||||| cuaGAAAUCUCAAUUGAAUUACAu 2 22 35 58 [ce6:III:4272260-4272283:+] 0.5000 157 7 -10.05 -0.9667 MIMAT0006586 cel-miR-1819 175550 R10E4.1 agguaguucgaguUAGUAAGGu |||||||| uacacucgaaaauAUCAUUCCc 2 10 78 99 [ce6:III:4272303-4272324:+] 0.5000 145 7 -14.08 -1.0364 MIMAT0011425 cel-miR-2207 175550 R10E4.1 gaauaugugucagaGUUAAGUgu :|||||| cgaaguauuuuuaaUAAUUCAaa 3 10 157 179 [ce6:III:4272382-4272404:+] 0.5000 121 0 -5.35 -0.3967 MIMAT0011454 cel-miR-2209b 175550 R10E4.1 acuucGUGUUGGCGAGUAGAGa :|| :|: :||||||: acauuUAC-GCUUUUCAUCUUu 2 18 202 222 [ce6:III:4272427-4272447:+] 0.5000 131 0 -15.84 -0.1859 MIMAT0011455 cel-miR-2218a 175550 R10E4.1 acuccgaauuUUGAACAUCAAAc | :|| |||||| uucccuguccAUUUUAUAGUUUu 2 14 95 117 [ce6:III:4272320-4272342:+] 0.5000 121 6 -4.49 -0.1042 MIMAT0011458 cel-miR-2218b* 175550 R10E4.1 agAGUGAUGUUUGAUGUUUAAa |: :|| | | | |||||| uaUUUUUA-AUAAUUCAAAUUu 2 21 162 182 [ce6:III:4272387-4272407:+] 0.5000 122 6 -5.83 -0.1379 MIMAT0011460 cel-miR-2219 175550 R10E4.1 gaaGUCGAAAGGGAGCGUGAAGc :||:||||::|: |||||| uuaUAGUUUUCUUUUUCACUUCa 2 21 108 130 [ce6:III:4272333-4272355:+] 0.5000 148 6 -21.32 -0.3719 MIMAT0011462 cel-miR-2220 175550 R10E4.1 gacauucagguguuuGUUAACu |||||| caugacuagaaaucuCAAUUGa 2 8 30 51 [ce6:III:4272255-4272276:+] 0.5000 120 6 -9.83 -0.1399 MIMAT0011463 cel-miR-2221 175550 R10E4.1 ugAUCGCCAGACCAUAGUGAAc |||: ||| | |||||| uaUAGUUUUCU-UUUUCACUUc 2 21 109 129 [ce6:III:4272334-4272354:+] 0.5000 126 6 -9.99 -0.1993 MIMAT0014447 cel-miR-2953-3p 175550 R10E4.1 cgaugucuUCUCGAUCACUAgu | | :||||||| aauaauucAAAUUUAGUGAUac 3 15 169 190 [ce6:III:4272394-4272415:+] 0.5000 130 0 -9.15 -0.1243 MIMAT0000017 cel-miR-46 175550 R10E4.1 acuucucucgcuGAGGUACUGu :|||||||| cuuuacccccauUUCCAUGACu 2 11 15 36 [ce6:III:4272240-4272261:+] 0.5000 146 7 -13.90 -1.2510 MIMAT0000018 cel-miR-47 175550 R10E4.1 acuucucucGCGGAGGUACUGu | ::|||||||| cuuuaccccCAUUUCCAUGACu 2 14 15 36 [ce6:III:4272240-4272261:+] 0.5000 149 7 -15.79 -1.2510 MIMAT0000032 cel-miR-60 175550 R10E4.1 acuugaucuuuuacacGUAUUAu |||||| ucaucuuuuaaucuuuCAUAAUa 2 8 215 237 [ce6:III:4272440-4272462:+] 0.5000 120 6 -5.60 -0.3881 MIMAT0000043 cel-miR-71 175550 R10E4.1 agugauggguacAGAAAGu |||||| uucaucuuuuaaUCUUUCa 2 8 214 232 [ce6:III:4272439-4272457:+] 0.5000 120 6 -10.43 -0.4526 MIMAT0000047 cel-miR-75 175550 R10E4.1 acuucggccaaccaUCGAAAUu ||||||| --uauuuuaucauaAGCUUUAc 2 9 1 20 [ce6:III:4272226-4272245:+] 0.5000 140 7 -6.83 -0.6411 MIMAT0000051 cel-miR-79 175550 R10E4.1 ucgAAACCAUUGGA-UCGAAAUa ||| || | | ||||||| -uaUUU--UAUCAUAAGCUUUAc 2 20 1 20 [ce6:III:4272226-4272245:+] 0.5000 147 7 -6.03 -0.6300 MIMAT0000058 cel-miR-85 175550 R10E4.1 cguGCUGAAAAGUUUAUG-AAACAu | | ||| :|||| ||||| auuCAAAUUUAGUGAUACAUUUGUa 2 22 173 197 [ce6:III:4272398-4272422:+] 0.5000 125 0 -10.45 -1.2339 MIMAT0000059 cel-miR-86 175550 R10E4.1 cugacaccguuucguAAGUGAAu ||||||| uuuauaguuuucuuuUUCACUUc 2 9 107 129 [ce6:III:4272332-4272354:+] 0.5000 140 7 -5.60 -1.1346 MIMAT0000060 cel-miR-87 175550 R10E4.1 cguguggacuuugaaACGAGUg |||||| aucuuucauaauaaaUGCUCAa 2 8 225 246 [ce6:III:4272450-4272471:+] 0.5000 120 6 -9.42 -0.6888 MIMAT0000288 cel-miR-233 175550 R10E4.1 ggcguguacgcguaACGAGUu |||||| ucuuucauaauaaaUGCUCAa 2 8 226 246 [ce6:III:4272451-4272471:+] 0.5000 120 6 -13.66 -0.6851 MIMAT0000291 cel-miR-236 175550 R10E4.1 ucgcaguaauggacugUCAUAAu |||||| augaugcaucuuucgaAGUAUUu 2 8 144 166 [ce6:III:4272369-4272391:+] 0.5000 120 6 -8.75 -0.1022 MIMAT0004220 cel-miR-785 175550 R10E4.1 agauguguuuuguuAAGUGAAu ||||||| uuauaguuuucuuuUUCACUUc 2 9 108 129 [ce6:III:4272333-4272354:+] 0.5000 140 7 -8.02 -1.1367 MIMAT0004231 cel-miR-796 175550 R10E4.1 aaUG-AUUGGAG--UUGAU-GUAAGGu || || ||| || || |||||| gcACAUACACUCGAAAAUAUCAUUCCc 2 22 73 99 [ce6:III:4272298-4272324:+] 0.5000 123 6 -14.98 -1.0404

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score R10E4.1 RAID00035097 cel-miR-233-3p miRNA MIMAT0000288 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID00378253 cel-miR-236-3p miRNA MIMAT0000291 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID00444321 cel-miR-60-3p miRNA MIMAT0000032 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID00587461 cel-miR-71-5p miRNA MIMAT0000043 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID00712099 cel-miR-796 miRNA MIMAT0004231 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID00856186 cel-miR-86-5p miRNA MIMAT0000059 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID01114184 cel-miR-85-3p miRNA MIMAT0000058 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID01192891 cel-miR-87-3p miRNA MIMAT0000060 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID02002705 cel-miR-785-3p miRNA MIMAT0004220 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID02255060 cel-miR-75-3p miRNA MIMAT0000047 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID02752639 cel-miR-46-3p miRNA MIMAT0000017 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID02829334 cel-miR-79-3p miRNA MIMAT0000051 R10E4.1 mRNA 175550 Prediction 0.1828 R10E4.1 RAID03026848 cel-miR-47-3p miRNA MIMAT0000018 R10E4.1 mRNA 175550 Prediction 0.1828