DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015104 cel-miR-63* 259502 T04A8.8 acugauggcUGCUCAAUCu |:||||||| uuuuuuguuAUGAGUUAGa 2 11 64 82 [ce6:III:4695111-4695129:+] 0.5087 146 7 -15.22 -1.2780 MIMAT0015114 cel-miR-238* 259502 T04A8.8 cgAAACUUGCAGGCUCUUGUAGGu |||| || | | ||||||: aaUUUG-AC-UACCUUAACAUCUa 2 23 24 45 [ce6:III:4695071-4695092:+] 0.5087 134 0 -13.09 -0.1261 MIMAT0015241 cel-miR-797* 259502 T04A8.8 uaaagugucuuugguUACUUUu |||||| ucgcuuuauucacuuAUGAAAa 2 8 106 127 [ce6:III:4695153-4695174:+] 0.5087 120 6 -9.62 -0.1114 MIMAT0005031 cel-miR-1018 259502 T04A8.8 gacAUU-CAGGUUAC-UAGAG-AGa ||| ||:| || ||||| || ccuUAACAUCUAUUGAAUCUCAUCg 2 20 34 58 [ce6:III:4695081-4695105:+] 0.5087 121 0 -10.21 -0.9947 MIMAT0006770 cel-miR-1829b 259502 T04A8.8 auguugguagaucuucUAGCGAa |||||| uuguuuuugauuuuaaAUCGCUu 2 8 89 111 [ce6:III:4695136-4695158:+] 0.5087 120 6 -8.76 -0.2045 MIMAT0011425 cel-miR-2207 259502 T04A8.8 gaAUAUGUGUCAGAGUUAAGUGu | || |: | ||: |||||| auUUUAAAUCG-CUUUAUUCACu 2 22 98 119 [ce6:III:4695145-4695166:+] 0.5087 127 6 -8.46 -0.1183 MIMAT0011432 cel-miR-2209a 259502 T04A8.8 acaucacauuggcgaCUAGAGa |||||| uuuuguuaugaguuaGAUCUCu 2 8 66 87 [ce6:III:4695113-4695134:+] 0.5087 120 6 -13.08 -0.1667 MIMAT0011438 cel-miR-2211 259502 T04A8.8 aaAGAGGAGAUUUAA---GAUGGAcu |:|:|| |||||| |||||| guUUUUCUGUAAAUUUGACUACCUua 3 22 13 38 [ce6:III:4695060-4695085:+] 0.5087 152 0 -18.07 -0.1956 MIMAT0011444 cel-miR-2214 259502 T04A8.8 uugcggcCAGUUCAA--CAACAG-UUAc |||||||| |||| ||| uuucuuuGUCAAGUUUAACUGUCUAAUg 2 19 141 168 [ce6:III:4695188-4695215:+] 0.5087 125 0 -17.20 -0.9984 MIMAT0011463 cel-miR-2221 259502 T04A8.8 ugaucgccagaccauAGUGAAc |||||| uuuaaaucgcuuuauUCACUUa 2 8 100 121 [ce6:III:4695147-4695168:+] 0.5087 120 6 -7.40 -0.2015 MIMAT0014446 cel-miR-2953-5p 259502 T04A8.8 uaAAAGUGCUUG---UGAAGACAu || :| ||| :|||||| -aUUCUAGAAACUGUUUUUCUGUa 2 20 1 23 [ce6:III:4695048-4695070:+] 0.5087 126 6 -11.51 -0.1605 MIMAT0000001 cel-let-7 259502 T04A8.8 uuGAUAUGUUGGA-UGAUGGAGu ||:|| ||::| |||||||: uuCUGUA-AAUUUGACUACCUUa 2 21 17 38 [ce6:III:4695064-4695085:+] 0.5087 149 0 -19.25 -0.1956 MIMAT0000019 cel-miR-48 259502 T04A8.8 agCGUAGAUGACUCGGAUGGAGu |:| | :||| ||||||: cuGUAAAU-UUGA--CUACCUUa 2 22 19 38 [ce6:III:4695066-4695085:+] 0.5087 128 0 -15.18 -0.1836 MIMAT0000030 cel-miR-58 259502 T04A8.8 uaacggcaugacuugCUAGAGu |||||| uuuuguuaugaguuaGAUCUCu 2 8 66 87 [ce6:III:4695113-4695134:+] 0.5087 120 6 -14.21 -0.1683 MIMAT0000047 cel-miR-75 259502 T04A8.8 acuucggccaaccauCGAAAUu |||||| uuuugauuuuaaaucGCUUUAu 2 8 93 114 [ce6:III:4695140-4695161:+] 0.5087 120 6 -5.08 -0.1345 MIMAT0000051 cel-miR-79 259502 T04A8.8 ucgaaaccauuggauCGAAAUa |||||| uuuugauuuuaaaucGCUUUAu 2 8 93 114 [ce6:III:4695140-4695161:+] 0.5087 120 6 -7.44 -0.1306 MIMAT0000053 cel-miR-80 259502 T04A8.8 agccGAA-AGUUGAUUAC-UAGAGu ||| || ||| || ||||| cuacCUUAACAUCUAUUGAAUCUCa 2 20 31 55 [ce6:III:4695078-4695102:+] 0.5087 126 0 -12.68 -1.0515 MIMAT0000053 cel-miR-80 259502 T04A8.8 agccgaaaguugauuaCUAGAGu |||||| uuuuuguuaugaguuaGAUCUCu 2 8 65 87 [ce6:III:4695112-4695134:+] 0.5087 120 6 -9.95 -0.1683 MIMAT0000054 cel-miR-81 259502 T04A8.8 ugaucgaaagugcuaCUAGAGu |||||| uuuuguuaugaguuaGAUCUCu 2 8 66 87 [ce6:III:4695113-4695134:+] 0.5087 120 6 -12.65 -0.1667 MIMAT0000055 cel-miR-82 259502 T04A8.8 ugaccgaaagugcuaCUAGAGu |||||| uuuuguuaugaguuaGAUCUCu 2 8 66 87 [ce6:III:4695113-4695134:+] 0.5087 120 6 -12.65 -0.1667 MIMAT0000057 cel-miR-84 259502 T04A8.8 auguUAUAAUGUAUGAUGGAGu | ||| :: |||||||: cuguAAAUU-UG-ACUACCUUa 2 19 19 38 [ce6:III:4695066-4695085:+] 0.5087 130 0 -13.02 -0.1938 MIMAT0000059 cel-miR-86 259502 T04A8.8 cugacaccguuucGUAAGUGAAu :|||||||| uuuuaaaucgcuuUAUUCACUUa 2 11 99 121 [ce6:III:4695146-4695168:+] 0.5087 146 7 -12.26 -1.2498 MIMAT0000297 cel-miR-241 259502 T04A8.8 aguaaagagcgugGAUGGAGu ||||||: ucuguaaauuugaCUACCUUa 2 9 18 38 [ce6:III:4695065-4695085:+] 0.5087 124 0 -15.13 -0.1975 MIMAT0004220 cel-miR-785 259502 T04A8.8 agAUGUGUUUUGUUAAGUGAAu || |: : : |||||||| uuUAAAUCGCUUUAUUCACUUa 2 21 100 121 [ce6:III:4695147-4695168:+] 0.5087 148 7 -12.13 -1.2510 MIMAT0004230 cel-miR-795 259502 T04A8.8 uucGAG-CGACUAGUUAGAUGGAGu :|| |: ||: : ||||||: uuuUUCUGUAAAUUUGACUACCUUa 2 22 14 38 [ce6:III:4695061-4695085:+] 0.5087 132 0 -13.90 -0.1975

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score T04A8.8 RAID00006787 cel-miR-79-3p miRNA MIMAT0000051 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID00960617 cel-miR-80-3p miRNA MIMAT0000053 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID01248536 cel-miR-81-3p miRNA MIMAT0000054 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID01342446 cel-let-7-5p miRNA MIMAT0000001 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID01505485 cel-miR-82-3p miRNA MIMAT0000055 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID01511477 cel-miR-84-5p miRNA MIMAT0000057 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID01633066 cel-miR-58a-3p miRNA MIMAT0000030 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID02081277 cel-miR-86-5p miRNA MIMAT0000059 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID03108197 cel-miR-241-5p miRNA MIMAT0000297 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID03141191 cel-miR-795-5p miRNA MIMAT0004230 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID03253963 cel-miR-785-3p miRNA MIMAT0004220 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID03474376 cel-miR-75-3p miRNA MIMAT0000047 T04A8.8 mRNA 259502 Prediction 0.1828 T04A8.8 RAID03972677 cel-miR-48-5p miRNA MIMAT0000019 T04A8.8 mRNA 259502 Prediction 0.1828