DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015109 cel-miR-81* 178139 T12G3.1 agAGUCUAGUGCCA---CUUUUGGc |||||| |: | |||||| uuUCAGAUAAUUUUUUAAAAAACCu 2 21 272 296 [ce6:IV:12036963-12036987:+] 0.5000 123 6 -13.59 -0.2718 MIMAT0015112 cel-miR-229* 178139 T12G3.1 gauacugugggcUAUGGAAAGa | ||||||: uaauuuuuuaaaAAACCUUUUc 2 11 279 300 [ce6:IV:12036970-12036991:+] 0.5000 126 0 -6.19 -0.1750 MIMAT0000311 cel-miR-256 178139 T12G3.1 auGUCAG-AAGAUACGUAAGGu :|||| ||:| |||||| auUAGUCAUUUUCAUCAUUCCa 2 20 49 70 [ce6:IV:12036740-12036761:+] 0.5576 130 6 -16.50 -0.1629 MIMAT0000312 cel-miR-257 178139 T12G3.1 agugacccauGAGGA-CUAUGAg ||||| |||||| aaccaacucuCUCCUAGAUACUa 2 13 27 49 [ce6:IV:12036718-12036740:+] 0.5576 124 6 -16.67 -1.1019 MIMAT0000313 cel-miR-258 178139 T12G3.1 uuUUCCUAAGGAGAGUUUUgg || || :|||||| ugAAAAAUAAACUUCAAAA-- 3 20 313 331 [ce6:IV:12037004-12037022:+] 0.5000 123 0 -3.83 -0.3219 MIMAT0000313 cel-miR-258 178139 T12G3.1 uuuuccuaaggagaGUUUUGg |||||| uaaaaaaccuuuucCAAAACa 2 8 287 307 [ce6:IV:12036978-12036998:+] 0.5000 120 6 -11.22 -0.4578 MIMAT0015240 cel-miR-788* 178139 T12G3.1 gcUAAGAUUAGGUAAAGg |||:|| |||||| gaAUUUUAUCACAUUUCg 2 17 249 266 [ce6:IV:12036940-12036957:+] 0.5000 128 6 -9.59 -0.1686 MIMAT0015241 cel-miR-797* 178139 T12G3.1 uaAAGUGUCUUUGGUUACUUUu | || | || | |||||| uuUCCAAAACAAACUAUGAAAa 2 21 297 318 [ce6:IV:12036988-12037009:+] 0.5000 128 6 -9.94 -0.1886 MIMAT0005033 cel-miR-1020 178139 T12G3.1 gacuuucacaguguCUUAUUa |||||| uuuuaucacauuucGAAUAAu 2 8 252 272 [ce6:IV:12036943-12036963:+] 0.5000 120 6 -8.99 -0.1441 MIMAT0006586 cel-miR-1819 178139 T12G3.1 aggUAGUUCGAGUUAGUAAGGu :||| :|| |||||||| uuaGUCAUUUUC-AUCAUUCCa 2 20 50 70 [ce6:IV:12036741-12036761:+] 0.5576 157 7 -19.10 -1.2080 MIMAT0006772 cel-miR-1830 178139 T12G3.1 cggaucuuuugcacUUUGGAGc ||||||: gauaauuuuuuaaaAAACCUUu 2 9 277 298 [ce6:IV:12036968-12036989:+] 0.5000 124 0 -5.51 -0.1382 MIMAT0011430 cel-miR-2208b-3p 178139 T12G3.1 acuucACAUGGUU-UUAGACGUa | | ::|| |||||| | auugcUUUUUUAAUAAUCUGAAa 2 18 129 151 [ce6:IV:12036820-12036842:+] 0.5076 120 0 -6.03 -0.1338 MIMAT0011459 cel-miR-2219* 178139 T12G3.1 cugcUACACGCUCUCUUUCGACa || | | | :|||||||| caucAU-UCCAAUGGAAAGCUGu 2 20 61 82 [ce6:IV:12036752-12036773:+] 0.5576 153 7 -14.26 -0.7439 MIMAT0000003 cel-miR-1 178139 T12G3.1 auguaugaagaaauGUAAGGu |||||| uuagucauuuucauCAUUCCa 2 8 50 70 [ce6:IV:12036741-12036761:+] 0.5576 120 6 -13.24 -0.1645 MIMAT0000697 cel-miR-355 178139 T12G3.1 guaucgaguccGAUUUUGUUu | ||||||| aaaaaccuuuuCCAAAACAAa 2 11 289 309 [ce6:IV:12036980-12037000:+] 0.5000 142 7 -6.60 -1.1133 MIMAT0004227 cel-miR-792 178139 T12G3.1 agACUUUCAACUUCUCUAAAGUu | | | || :| |||||| uaUCACAUUUCGAAUAAUUUCAg 2 22 255 277 [ce6:IV:12036946-12036968:+] 0.5000 121 6 -5.36 -0.2393 MIMAT0004231 cel-miR-796 178139 T12G3.1 aaUGAUUGG-AGUUGAUGUAAGGu |:||::| |: | |||||| cuAUUAGUCAUUUUCAUCAUUCCa 2 22 47 70 [ce6:IV:12036738-12036761:+] 0.5576 124 6 -15.76 -0.1676

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score sqst-1 RAID02530372 cel-miR-796 miRNA MIMAT0004231 sqst-1 mRNA 178139 Prediction 0.1828 sqst-1 RAID02601176 cel-miR-355-5p miRNA MIMAT0000697 sqst-1 mRNA 178139 Prediction 0.1828 sqst-1 RAID02689793 cel-miR-792-3p miRNA MIMAT0004227 sqst-1 mRNA 178139 Prediction 0.1828 sqst-1 RAID03357531 cel-miR-1-3p miRNA MIMAT0000003 sqst-1 mRNA 178139 Prediction 0.1828