T16H12.4
SNP
mRNA Expression
DNA & RNA Element
PPI
Proteomics
microRNA
miRNAMap
DNA & RNA Element - microRNA
Mirbase Acc
miRNA Name
Gene ID
Gene Symbol
miRNA Alignment
Alignment
Gene Alignment
miRNA Start
miRNA End
Gene Start
Gene End
Genome Coordinates
Conservation
Align Score
Seed Cat
Energy
mirSVR Score
MIMAT0005522
cel-miR-1021
176421
T16H12.4
ggcuccUAA--AGUGUACUAGAGUGAa
||| ||||:| |||||||
uuuuaaAUUACUCACGUUCUCUCACUu
2
20
10
36
[ce6:III:10088711-10088737:-]
0.4634
162
7
-18.72
-0.2502
MIMAT0011454
cel-miR-2209b
176421
T16H12.4
acuucguguuggcGAGUAGAGa
:||||||:
ggacggguuuuauUUCAUCUUu
2
10
40
61
[ce6:III:10088686-10088707:-]
0.4731
125
0
-11.55
-0.1946
DNA & RNA Element - miRNAMap
Gene Name
Mature miRNA
Target Start
Target End
miRNA 3-5
Alignment
Target 5-3
T16H12.4
cel-miR-54
37
49
GAGCCUAAUACUUCUAAUGCCCAU
||||| |||||
UUCGGA------------CGGGUU
T16H12.4
cel-miR-55
19
49
-GAGU-CGUCUU--UGAAUA---UGCCCAU
|||| |: |||| ||||||
ACUCACGUUCUCUCACUUUUCGGACGGGUU
T16H12.4
cel-miR-56
29
49
-GAGUC----GCCUUUGUAAUGCCCAU
|||| |||| |||||
UCUCACUUUUCGGA-------CGGGUU
T16H12.4
cel-miR-54
25
48
gagccuaauacuucuaaUGCCCAu
||||||
gttctctcacttttcggACGGGTt
T16H12.4
cel-miR-55
26
48
gagucgucuuugaauaUGCCCAu
||||||
ttctctcacttttcggACGGGTt
T16H12.4
cel-miR-56
27
48
gagucgccuuuguaaUGCCCAu
||||||
tctctcacttttcggACGGGTt