DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015110 cel-miR-84* 176422 bath-43 cggcuCAAUCAACUUUGUAACAc || | ||| :|||||| ucgucGUCAUUUGUUGCAUUGUu 2 19 292 314 [ce6:III:10090783-10090805:-] 0.5053 142 6 -13.36 -0.1236 MIMAT0000324 cel-miR-268 176422 bath-43 ugguuuGACGAAGAUUAAGAACgg :| :||:|| |||||| uuuuuuUUCUUUUUAUUUCUUGaa 3 19 126 149 [ce6:III:10090948-10090971:-] 0.5053 142 0 -10.60 -0.2544 MIMAT0000325 cel-miR-269 176422 bath-43 ucaAAACGGU--CU---CAGAACgg ||||:|| || |||||| ---UUUGUCAUCGAAAUGUCUUGaa 3 18 1 22 [ce6:III:10091075-10091096:-] 0.5684 131 0 -12.37 -0.1544 MIMAT0006771 cel-miR-1829c 176422 bath-43 auguugguAGAACUUAAAGCGAa ||||| | |||||| uuuuuauuUCUUG-AAUUCGCUa 2 16 135 156 [ce6:III:10090941-10090962:-] 0.5053 129 6 -15.76 -0.3821 MIMAT0006776 cel-miR-1834 176422 bath-43 aaccUAGAGUUAC-CAAC-UAGAGa ||| |||| ||| ||||| ugucAUCGAAAUGUCUUGAAUCUCu 2 20 3 27 [ce6:III:10091070-10091094:-] 0.5684 126 0 -14.51 -0.8320 MIMAT0011447 cel-miR-2216 176422 bath-43 cggauggcugAAUUUUACAcg | :|||||| ---uuugucaUCGAAAUGUcu 3 12 1 18 [ce6:III:10091079-10091096:-] 0.5684 123 0 -9.22 -0.1418 MIMAT0011449 cel-miR-1832b* 176422 bath-43 uuucacccggcucgcUAAGCGAc ||||||| cuuuuuauuucuugaAUUCGCUa 2 9 134 156 [ce6:III:10090941-10090963:-] 0.5053 140 7 -9.06 -1.2959 MIMAT0011457 cel-miR-2218b 176422 bath-43 cuuuuacuacaucaAACAUCAGa |||||||| cccccauacuugaaUUGUAGUCa 2 10 34 56 [ce6:III:10091041-10091063:-] 0.5684 145 7 -9.67 -1.1838 MIMAT0011458 cel-miR-2218b* 176422 bath-43 agagUGAUGUUUGAUGUUUAaa | | :||| |||||| agaaAAUUUAAAAAACAAAUaa 3 19 267 288 [ce6:III:10090809-10090830:-] 0.5053 134 0 -4.48 -0.2887 MIMAT0014446 cel-miR-2953-5p 176422 bath-43 uaaAAGUGCUUGUGAAGACAu ||| :| |:::|||||| uucUUCCUGUAUGUUUCUGUa 2 19 104 124 [ce6:III:10090973-10090993:-] 0.5053 146 6 -14.90 -0.1296 MIMAT0000035 cel-miR-63 176422 bath-43 aaaGGU-UGAGCGAAGUCA-CAGUAu ||| |||:| |: || ||||| cccCCAUACUUGAAUU-GUAGUCAUc 2 22 34 58 [ce6:III:10091039-10091063:-] 0.5684 122 0 -15.36 -0.8315 MIMAT0000038 cel-miR-66 176422 bath-43 aguGUAGGGAUUAGUCA-CAGUAc ||| |:|:| : || ||||| cccCAUACUUGAAUUGUAGUCAUc 2 21 35 58 [ce6:III:10091039-10091062:-] 0.5684 128 0 -11.03 -0.8587 MIMAT0000038 cel-miR-66 176422 bath-43 aguguagggAUUAGUCA-CAGUAc ||||| || ||||| aacaaauaaUAAUC-GUCGUCAUu 2 15 280 302 [ce6:III:10090795-10090817:-] 0.5053 120 0 -12.94 -0.8407 MIMAT0000284 cel-miR-229 176422 bath-43 gcuaccUUUUCUAUUGGUCA-CAGUAa ||| ||||:| || ||||| aaaaacAAAUAAUAAUC-GUCGUCAUu 2 21 277 302 [ce6:III:10090795-10090820:-] 0.5053 130 0 -13.12 -0.8336 MIMAT0000287 cel-miR-232 176422 bath-43 agUGGCGUCA--AUUCUACGUAAau |:||: || | | |||||| uaAUCGUCGUCAUUUGUUGCAUUgu 3 22 289 313 [ce6:III:10090784-10090808:-] 0.5053 132 0 -14.71 -0.1095 MIMAT0004216 cel-miR-255 176422 bath-43 gacauuuuuuAGAGAAGUCAAa |:|:||||| | uguuuuguuuUUUUUUCAGAUu 2 13 311 332 [ce6:III:10090765-10090786:-] 0.5053 120 0 -9.67 -0.2206 MIMAT0000697 cel-miR-355 176422 bath-43 guaucgaguccgaUUUUGUUu ||||||| aaagaaaauuuaaAAAACAAa 2 9 265 285 [ce6:III:10090812-10090832:-] 0.5053 140 7 -6.60 -1.3131

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score bath-43 RAID00002520 cel-miR-255-3p miRNA MIMAT0004216 bath-43 mRNA 176422 Prediction 0.1828 bath-43 RAID01076843 cel-miR-77-3p miRNA MIMAT0000049 bath-43 mRNA 176422 Prediction 0.1828 bath-43 RAID01291472 cel-miR-355-5p miRNA MIMAT0000697 bath-43 mRNA 176422 Prediction 0.1828 bath-43 RAID02117616 cel-miR-232-3p miRNA MIMAT0000287 bath-43 mRNA 176422 Prediction 0.1828 bath-43 RAID02538984 cel-miR-229-5p miRNA MIMAT0000284 bath-43 mRNA 176422 Prediction 0.1828 bath-43 RAID03559506 cel-miR-63-3p miRNA MIMAT0000035 bath-43 mRNA 176422 CLIP-seq//Prediction 0.6308 bath-43 RAID03848347 cel-miR-66-5p miRNA MIMAT0000038 bath-43 mRNA 176422 CLIP-seq//Prediction 0.6308 bath-43 RAID03985851 cel-miR-56-3p miRNA MIMAT0000028 bath-43 mRNA 176422 Prediction 0.1828