DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015107 cel-miR-71* 176753 Y43F4B.9 cgcuuuuugucUUAUCACUAu ::||||||| gcuucacccuuGGUAGUGAUu 2 11 964 984 [ce6:III:13316406-13316426:+] 0.5049 142 7 -9.41 -0.1235 MIMAT0000322 cel-miR-266 176753 Y43F4B.9 cgaaacgguuucAGAACGGa ||||||| cucaaggggucuUCUUGCCu 2 9 579 598 [ce6:III:13316021-13316040:+] 0.5074 140 7 -16.08 -0.1479 MIMAT0000324 cel-miR-268 176753 Y43F4B.9 uggUUUGACGAAGAUUAAGAACGg | |: || | | ||||||| gugACAUCGCCAC-ACUUCUUGCa 2 22 256 278 [ce6:III:13315698-13315720:+] 0.5074 147 7 -12.48 -0.1487 MIMAT0006776 cel-miR-1834 176753 Y43F4B.9 aaccUAGAGUUACCAACU-AGAGa :| || :| ||||| |||| caccGUGUC-GUUGUUGAUUCUCg 2 20 285 307 [ce6:III:13315727-13315749:+] 0.5074 121 0 -12.52 -0.1252 MIMAT0011432 cel-miR-2209a 176753 Y43F4B.9 acauCACAUUGGCGACU-AGAGa |||| :::|:||| |||| caccGUGUCGUUGUUGAUUCUCg 2 19 285 307 [ce6:III:13315727-13315749:+] 0.5074 130 0 -17.21 -0.1252 MIMAT0011434 cel-miR-2209c 176753 Y43F4B.9 acaucACAUUGGCCA-CCAGAAAa | | :|| | ||||||| ggucuUCUUGCCUUUAGGUCUUUg 2 19 586 609 [ce6:III:13316028-13316051:+] 0.5074 145 7 -10.57 -0.1663 MIMAT0011451 cel-miR-2217* 176753 Y43F4B.9 cuaGCUGUGGCUGA-CG-GGUGAGAc :||: |:|:|| || ||||||| aucUGAUUCUGGCUAGCUCCACUCUu 2 22 341 366 [ce6:III:13315783-13315808:+] 0.5074 163 7 -27.09 -0.2025 MIMAT0011451 cel-miR-2217* 176753 Y43F4B.9 cuAGCUGUGGCUGACG-GGUGAGAc || :| ::| : || ||||||| ucUCAGCCUUGCUAGCUCCACUCUg 2 23 940 964 [ce6:III:13316382-13316406:+] 0.5049 153 7 -22.96 -0.1793 MIMAT0011452 cel-miR-2217 176753 Y43F4B.9 uggcuuUGUCCGUG-UUCCCAGCu :||||::| :||||||| accacuGCAGGUGCGGAGGGUCGa 2 18 735 758 [ce6:III:13316177-13316200:+] 0.5061 160 7 -30.66 -0.1217 MIMAT0000002 cel-lin-4 176753 Y43F4B.9 agugUGAACUCCAGAGUCCCu |:|| |||||||| cucaAUUUCUUCUCUCAGGGg 2 18 1262 1282 [ce6:III:13316704-13316724:+] 0.5106 149 7 -18.29 -0.2515 MIMAT0000003 cel-miR-1 176753 Y43F4B.9 auGUAUGAAGAAAUGUAAGGu |||: | :| ||||||| agCAUG-UGUUCCACAUUCCc 2 20 235 254 [ce6:III:13315677-13315696:+] 0.5074 149 7 -13.41 -0.1040 MIMAT0000044 cel-miR-72 176753 Y43F4B.9 agucgauacgguuGUAGAACGGa | ||||||| ccucucaagggguCUUCUUGCCu 2 11 576 598 [ce6:III:13316018-13316040:+] 0.5074 142 7 -16.34 -0.1479 MIMAT0000045 cel-miR-73 176753 Y43F4B.9 ugacuugacggauGUAGAACGGu | ||||||| ccucucaagggguCUUCUUGCCu 2 11 576 598 [ce6:III:13316018-13316040:+] 0.5074 142 7 -15.32 -0.1465 MIMAT0000046 cel-miR-74 176753 Y43F4B.9 acaucugacgguaAAGAACGGu |||||||| cucucaaggggucUUCUUGCCu 2 10 577 598 [ce6:III:13316019-13316040:+] 0.5074 145 7 -15.82 -0.1494 MIMAT0000047 cel-miR-75 176753 Y43F4B.9 acuuCGGCC--AACCAUCGAAAUu |:||| || ||||||| uuccGUCGGCCUUCUGAGCUUUAa 2 19 1178 1201 [ce6:III:13316620-13316643:+] 0.5106 149 7 -15.94 -0.2075 MIMAT0000051 cel-miR-79 176753 Y43F4B.9 ucGAAACCAUUGGA-UCGAAAUa | | || :|| ||||||| ucCGUCGGCCUUCUGAGCUUUAa 2 21 1179 1201 [ce6:III:13316621-13316643:+] 0.5106 147 7 -10.84 -0.2114 MIMAT0000292 cel-miR-237 176753 Y43F4B.9 ucgacaagcucuuaAGAGUCCCu |||||||| agcucaauuucuucUCUCAGGGg 2 10 1260 1282 [ce6:III:13316702-13316724:+] 0.5106 145 7 -19.24 -0.2583 MIMAT0000305 cel-miR-249 176753 Y43F4B.9 ccGU-UGCGAGUUUUCA-GGACACu || ::|:|| | | | |||||| agCAUGUGUUCCACAUUCCCUGUGa 2 22 235 259 [ce6:III:13315677-13315701:+] 0.5074 124 6 -19.88 -0.2010 MIMAT0004231 cel-miR-796 176753 Y43F4B.9 aaugauuggaguuGAUGUAAGGu | ||||||| cucagcauguguuCCACAUUCCc 2 11 232 254 [ce6:III:13315674-13315696:+] 0.5074 142 7 -16.53 -0.1051

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Y43F4B.9 RAID00128357 cel-miR-249-3p miRNA MIMAT0000305 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID00276500 cel-lin-4-5p miRNA MIMAT0000002 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID01041780 cel-miR-1-3p miRNA MIMAT0000003 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID01189968 cel-miR-72-5p miRNA MIMAT0000044 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID01229517 cel-miR-796 miRNA MIMAT0004231 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID01733660 cel-miR-237-5p miRNA MIMAT0000292 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID02183777 cel-miR-79-3p miRNA MIMAT0000051 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID02688808 cel-miR-73-3p miRNA MIMAT0000045 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID03140751 cel-miR-74-3p miRNA MIMAT0000046 Y43F4B.9 mRNA 176753 Prediction 0.1828 Y43F4B.9 RAID03585507 cel-miR-75-3p miRNA MIMAT0000047 Y43F4B.9 mRNA 176753 Prediction 0.1828