DNA & RNA Element - circBase circRNA ID Chrom Start End Strand cel_circ_0000263 chrII 12364319 12365539 -

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT033819 cel-miR-254-3p Caenorhabditis elegans Y57A10B.1 174876 Caenorhabditis elegans Sequencing Functional MTI (Weak) 20062054 MIRT033605 cel-miR-266 Caenorhabditis elegans Y57A10B.1 174876 Caenorhabditis elegans Sequencing Functional MTI (Weak) 20062054

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015094 cel-miR-37* 174876 Y57A10B.1 cguggcguugccuGUGGGUGu :|||||| uuaugguccuucuUACCCACu 2 9 3 23 [ce6:II:12358898-12358918:-] 0.6377 124 6 -14.43 -0.4648 MIMAT0015109 cel-miR-81* 174876 Y57A10B.1 agaGUCUAGUGCCACUUUUGGc || ||| | | |||||| uccCAAAUCCCCUUUAAAACCa 2 20 89 110 [ce6:II:12358811-12358832:-] 0.5478 131 6 -6.70 -0.1528 MIMAT0015113 cel-miR-230* 174876 Y57A10B.1 auuaUAAUUUAGCGGCUGGUUca :|| ||:| :|||||| ucucGUUCUAUUG-UGACCAAau 3 20 29 50 [ce6:II:12358871-12358892:-] 0.5478 133 0 -11.93 -0.1089 MIMAT0015119 cel-miR-247* 174876 Y57A10B.1 ccauuAAUCUUUGAAAAGAGAu || |||||||:||| aucuuUUUCUAACUUUUUUCUu 2 18 220 241 [ce6:II:12358680-12358701:-] 0.5478 145 0 -11.34 -0.1335 MIMAT0015119 cel-miR-247* 174876 Y57A10B.1 ccAUUAAUCUUUGAAAAGAGAu | ||| | ||||||| cuUCAUUCUUUUCGUUUCUCUa 2 21 199 220 [ce6:II:12358701-12358722:-] 0.5478 144 7 -8.82 -1.1465 MIMAT0000313 cel-miR-258 174876 Y57A10B.1 uuuuccuAAGGAGAGUUUUgg ||::|:|||||| uuugaacUUUUUUUCAAAAaa 3 15 63 83 [ce6:II:12358838-12358858:-] 0.5478 138 0 -8.72 -0.1915 MIMAT0006586 cel-miR-1819 174876 Y57A10B.1 agGUAGUUCGAGUUAGUAAGGu ::|: | || ||||||: ugUGUUUAUGUC-UUCAUUCUu 2 21 188 208 [ce6:II:12358713-12358733:-] 0.5478 126 0 -8.19 -0.1135 MIMAT0015267 cel-miR-1829a* 174876 Y57A10B.1 auGUUUGUUAAUC-----UUCAGGGGAa |||| || | | || |||||| uuCAAAAAACUUGUUCCCAAAUCCCCUu 2 22 75 102 [ce6:II:12358819-12358846:-] 0.5478 124 6 -12.33 -0.1600 MIMAT0011458 cel-miR-2218b* 174876 Y57A10B.1 agagugauguuugauGUUUAAa |||||| ucguucuauugugacCAAAUUg 2 8 31 52 [ce6:II:12358869-12358890:-] 0.5478 120 6 -6.05 -0.2214 MIMAT0014446 cel-miR-2953-5p 174876 Y57A10B.1 uaaaagugcUUGUGAAGACAu ||: :|||||| ugcaaaagaAAUUUUUCUGUg 2 13 169 189 [ce6:II:12358732-12358752:-] 0.5478 132 6 -13.62 -0.1649 MIMAT0000058 cel-miR-85 174876 Y57A10B.1 cgugcuGAAAAGUUUAUGAAACAu |||||: | ||||| | cucuauCUUUUUCUA-ACUUUUUu 2 19 216 238 [ce6:II:12358683-12358705:-] 0.5478 124 0 -4.59 -0.1174 MIMAT0000301 cel-miR-245 174876 Y57A10B.1 cucgaugaaccucccCUGGUUa |||||| aucucguucuauuguGACCAAa 2 8 28 49 [ce6:II:12358872-12358893:-] 0.5478 120 6 -9.91 -0.2376

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 marc-5; CELE_Y57A10B.1; Y57A10B.1 cel-miR-249 159 191 CCG-UUGCGA--GUUUUC------AGGACACU || ||:|: |||||| |:||||| UGCAAAUGUUUGCAAAAGAAAUUUUUCUGUGU marc-5; CELE_Y57A10B.1; Y57A10B.1 cel-miR-253 12 43 -GGAA-GGGUGUU-------GC-GGAUGAUU :||| ||||| || :|||:|: UUCUUACCCACUAUUUAUCUCGUUCUAUUGU marc-5; CELE_Y57A10B.1; Y57A10B.1 cel-miR-265 119 140 UAUGGUGGGAAGGAGGG--AGU- |:||:: ||||||: ||| --UCUACUUCUCCUCCUUUUCAA marc-5; CELE_Y57A10B.1; Y57A10B.1 cel-miR-72 140 173 -AGUCGAU---ACGGU----UGUA---GAACGGA ||:|:|| |||| :|| :|||| UUCGGUUAUGUUGCCUUUAUGCAAAUGUUUGCA- marc-5; CELE_Y57A10B.1; Y57A10B.1 cel-miR-253 10 25 GGAAGGGUGUUGCGGAUGAUu |||||::| || |||| CCTTCTTA-----CCCACTAt marc-5; CELE_Y57A10B.1; Y57A10B.1 cel-miR-265 117 136 uAUGGUGGGAAGGAGGGAgu | |:||:: ||||||:| cTTCTACTTCTCCTCCTTtt marc-5; CELE_Y57A10B.1; Y57A10B.1 cel-miR-72 133 155 agucGAUACGGUUGUAGAACGGA | || | : :|| |||||| ttttCAATTCGGTTATGTTGCCT

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score marc-5 RAID00979235 cel-miR-266 miRNA MIMAT0000322 marc-5 mRNA 174876 NGS (Next Generation Sequencing) 0.5483 marc-5 RAID01836783 cel-miR-254-3p miRNA MIMAT0000310 marc-5 mRNA 174876 NGS (Next Generation Sequencing) 0.5483 marc-5 RAID02930427 cel-miR-85-3p miRNA MIMAT0000058 marc-5 mRNA 174876 CLIP-seq//Prediction 0.6308 marc-5 RAID03802971 cel-miR-245-3p miRNA MIMAT0000301 marc-5 mRNA 174876 Prediction 0.1828