DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005522 cel-miR-1021 173321 bath-40 ggCUCCUAAAGUG-UACU---AGAGUGAa || | |||:| :||| ||||||| ucGAAAAAUUCGCUGUGAUUUUCUCACUc 2 24 93 121 [ce6:I:14651101-14651129:+] 0.4836 157 7 -21.41 -0.7392 MIMAT0011446 cel-miR-2215 173321 bath-40 uuUGUUGUGCGCGAUG-CUAAGa || :| | | | || ||||| caACCGCCCUCACCACAGAUUCa 2 21 299 321 [ce6:I:14651307-14651329:+] 0.4993 120 0 -13.57 -0.5493 MIMAT0011449 cel-miR-1832b* 173321 bath-40 uuucacccGGCUCGCUAAGCGAc :||| ||||||| acucuuucUCGAAAAAUUCGCUg 2 16 85 107 [ce6:I:14651093-14651115:+] 0.4836 147 7 -17.08 -0.8215 MIMAT0000004 cel-miR-2 173321 bath-40 cguguagUUUCGACCGACACUAu ||| :| |||||||| uucucgaAAAAUUCGCUGUGAUu 2 17 90 112 [ce6:I:14651098-14651120:+] 0.4836 160 7 -14.71 -0.4466 MIMAT0000006 cel-miR-35 173321 bath-40 ugacgaucaaaGGUGGGCCACu || ||||||| aaaucccccccCCCCCCGGUGa 2 12 260 281 [ce6:I:14651268-14651289:+] 0.4993 147 7 -20.72 -0.2959 MIMAT0000007 cel-miR-36 173321 bath-40 guacgcuuaaaaGUGGGCCACu | ||||||| aaauccccccccCCCCCGGUGa 2 11 260 281 [ce6:I:14651268-14651289:+] 0.4993 142 7 -17.20 -0.2984 MIMAT0000008 cel-miR-37 173321 bath-40 ugacguucacaaGUGGGCCACu | ||||||| aaauccccccccCCCCCGGUGa 2 11 260 281 [ce6:I:14651268-14651289:+] 0.4993 142 7 -17.20 -0.2984 MIMAT0000009 cel-miR-38 173321 bath-40 ugaggucaaaaaGAGGGCCACu | ||||||| aaauccccccccCCCCCGGUGa 2 11 260 281 [ce6:I:14651268-14651289:+] 0.4993 142 7 -20.01 -0.2984 MIMAT0000010 cel-miR-39 173321 bath-40 guucgacuaaauGUGGGCCACu | ||||||| aaauccccccccCCCCCGGUGa 2 11 260 281 [ce6:I:14651268-14651289:+] 0.4993 142 7 -17.16 -0.2959 MIMAT0000011 cel-miR-40 173321 bath-40 aaucgacuacauGUGGGCCACu | ||||||| aaauccccccccCCCCCGGUGa 2 11 260 281 [ce6:I:14651268-14651289:+] 0.4993 142 7 -17.16 -0.2959 MIMAT0000012 cel-miR-41 173321 bath-40 auccacuaaaaaGUGGGCCACu | ||||||| aaauccccccccCCCCCGGUGa 2 11 260 281 [ce6:I:14651268-14651289:+] 0.4993 142 7 -17.20 -0.2984 MIMAT0000013 cel-miR-42 173321 bath-40 agacaucuacaauuGGGCCACu ||||||| aaauccccccccccCCCGGUGa 2 9 260 281 [ce6:I:14651268-14651289:+] 0.4993 140 7 -17.16 -0.2984 MIMAT0000014 cel-miR-43 173321 bath-40 cgcugucgUUCAUUUGACACUAu || | :||||||| uucucgaaAAAUUCGCUGUGAUu 2 16 90 112 [ce6:I:14651098-14651120:+] 0.4836 147 7 -13.27 -0.4499 MIMAT0000015 cel-miR-44 173321 bath-40 ucgacuuacacAGAGAUCAGu |:||||||| uucauagauacUUUCUAGUCa 2 11 31 51 [ce6:I:14651039-14651059:+] 0.5418 146 7 -13.41 -1.2027 MIMAT0000016 cel-miR-45 173321 bath-40 ucgacuuacacAGAGAUCAGu |:||||||| uucauagauacUUUCUAGUCa 2 11 31 51 [ce6:I:14651039-14651059:+] 0.5418 146 7 -13.41 -1.2027 MIMAT0000033 cel-miR-61 173321 bath-40 cuacUCAUUGCCAAGAUCAGu || || |||||||| ucauAGAUAC-UUUCUAGUCa 2 18 32 51 [ce6:I:14651040-14651059:+] 0.5418 147 7 -12.58 -1.1995 MIMAT0000303 cel-miR-247 173321 bath-40 ucuUCUCUUAUCCGAGAUCAGu | || ||| :||||||| uucAUAG-AUACUUUCUAGUCa 2 20 31 51 [ce6:I:14651039-14651059:+] 0.5418 153 7 -14.09 -1.2011 MIMAT0000305 cel-miR-249 173321 bath-40 ccguugcGAG--UUUUCAG-GACACu ||| |||| || ||||| acucuuuCUCGAAAAAUUCGCUGUGa 2 17 85 110 [ce6:I:14651093-14651118:+] 0.4836 123 0 -17.28 -1.0875 MIMAT0000306 cel-miR-250 173321 bath-40 acGGUUGUCAACUGACACUAa | || | || :||||||| cuCGAAAAAUUCGCUGUGAUu 2 20 92 112 [ce6:I:14651100-14651120:+] 0.4836 159 7 -12.78 -0.4466 MIMAT0004231 cel-miR-796 173321 bath-40 aaugauuGGAGUUGAUGU-AAGGu | ||::| ||| |||| accgcuuCAUCGGCGACAGUUCCc 2 17 230 253 [ce6:I:14651238-14651261:+] 0.4915 120 0 -12.80 -0.1682 MIMAT0004232 cel-miR-797 173321 bath-40 agAAGAGUAACACUAA-CGACACUAu |||||: ||| |||||||| cuUUCUCG-AAAAAUUCGCUGUGAUu 2 24 88 112 [ce6:I:14651096-14651120:+] 0.4836 156 7 -20.55 -0.4598

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score bath-40 RAID00434334 cel-miR-250-3p miRNA MIMAT0000306 bath-40 mRNA 173321 Prediction 0.2202 bath-40 RAID01428158 cel-miR-247-3p miRNA MIMAT0000303 bath-40 mRNA 173321 CLIP-seq//Prediction 0.6478 bath-40 RAID01702002 cel-miR-61-3p miRNA MIMAT0000033 bath-40 mRNA 173321 CLIP-seq//Prediction 0.6559 bath-40 RAID01728430 cel-miR-796 miRNA MIMAT0004231 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID01945736 cel-miR-249-3p miRNA MIMAT0000305 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID02102708 cel-miR-40-3p miRNA MIMAT0000011 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID02366113 cel-miR-41-3p miRNA MIMAT0000012 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID02640754 cel-miR-42-3p miRNA MIMAT0000013 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID02925756 cel-miR-2-3p miRNA MIMAT0000004 bath-40 mRNA 173321 Prediction 0.2202 bath-40 RAID02942906 cel-miR-43-3p miRNA MIMAT0000014 bath-40 mRNA 173321 Prediction 0.2202 bath-40 RAID03047926 cel-miR-35-3p miRNA MIMAT0000006 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID03233593 cel-miR-44-3p miRNA MIMAT0000015 bath-40 mRNA 173321 CLIP-seq//Prediction 0.6478 bath-40 RAID03309699 cel-miR-36-3p miRNA MIMAT0000007 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID03471818 cel-miR-797-5p miRNA MIMAT0004232 bath-40 mRNA 173321 Prediction 0.2381 bath-40 RAID03489851 cel-miR-45-3p miRNA MIMAT0000016 bath-40 mRNA 173321 CLIP-seq//Prediction 0.6478 bath-40 RAID03598238 cel-miR-37-3p miRNA MIMAT0000008 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID03628090 cel-miR-39-3p miRNA MIMAT0000010 bath-40 mRNA 173321 Prediction 0.1828 bath-40 RAID03857223 cel-miR-38-3p miRNA MIMAT0000009 bath-40 mRNA 173321 Prediction 0.1828