DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0015096 | cel-miR-46* | 3564805 | C02F5.7 | gacaguuaucugccGAGAGAa | |||||| | aauuauccauuuuuCUCUCUu | 2 | 8 | 39 | 59 | [ce6:III:8231798-8231818:+] | 0.6222 | 120 | 6 | -11.32 | -0.1182 |
MIMAT0015096 | cel-miR-46* | 3564805 | C02F5.7 | gacaguuaucugccGAGAGAa | |||||| | aauuauccauuuuuCUCUCUu | 2 | 8 | 39 | 59 | [ce6:III:8231798-8231818:+] | 0.6222 | 120 | 6 | -11.32 | -0.1093 |
MIMAT0015097 | cel-miR-47* | 3564805 | C02F5.7 | ugacaguuaucugacGAGAGAa | |||||| | uaauuauccauuuuuCUCUCUu | 2 | 8 | 38 | 59 | [ce6:III:8231797-8231818:+] | 0.6222 | 120 | 6 | -12.11 | -0.1182 |
MIMAT0015097 | cel-miR-47* | 3564805 | C02F5.7 | ugacaguuaucugacGAGAGAa | |||||| | uaauuauccauuuuuCUCUCUu | 2 | 8 | 38 | 59 | [ce6:III:8231797-8231818:+] | 0.6222 | 120 | 6 | -12.11 | -0.1093 |
MIMAT0015115 | cel-miR-239b* | 3564805 | C02F5.7 | aaaAACGUGUGGU-GUUUUCAcg | ||| |:| | |||||| | caaUUG-AUAGAAGAAAAAGUaa | 3 | 20 | 566 | 587 | [ce6:III:8232626-8232647:+] | 0.5027 | 124 | 0 | -4.55 | -0.1643 |
MIMAT0015115 | cel-miR-239b* | 3564805 | C02F5.7 | aaaaacgUGUGGUGUUUUCAcg | | | :| |||||| | agaagaaAAAGUA-AAAAGUua | 3 | 16 | 574 | 594 | [ce6:III:8232634-8232654:+] | 0.5027 | 121 | 0 | -5.07 | -0.1267 |
MIMAT0015119 | cel-miR-247* | 3564805 | C02F5.7 | ccAUUAAUCUUUGAAAAGAGAu | |||||| |:|||||||| | ggUAAUUAUCCAUUUUUCUCUc | 2 | 21 | 36 | 57 | [ce6:III:8231795-8231816:+] | 0.6222 | 172 | 7 | -18.32 | -1.1322 |
MIMAT0015119 | cel-miR-247* | 3564805 | C02F5.7 | ccAUUAAUCUUUGAAAAGAGAu | |||||| |:|||||||| | ggUAAUUAUCCAUUUUUCUCUc | 2 | 21 | 36 | 57 | [ce6:III:8231795-8231816:+] | 0.6222 | 172 | 7 | -18.32 | -1.1151 |
MIMAT0000315 | cel-miR-260 | 3564805 | C02F5.7 | gaUGUUCUCAAGCUGUAGUg | ||:| ||| :||||||| | ugACGA-AGUCUGACAUCAa | 2 | 19 | 222 | 240 | [ce6:III:8232120-8232138:+] | 0.7017 | 160 | 7 | -18.27 | -1.0287 |
MIMAT0000315 | cel-miR-260 | 3564805 | C02F5.7 | gaUGUUCUCAAGCUGUAGUg | ||:| ||| :||||||| | ugACGA-AGUCUGACAUCAa | 2 | 19 | 60 | 78 | [ce6:III:8232120-8232138:+] | 0.7017 | 160 | 7 | -18.27 | -0.9960 |
MIMAT0000315 | cel-miR-260 | 3564805 | C02F5.7 | gaUGUUCUCAAGCUGUAGUg | ||:| ||| :||||||| | ugACGA-AGUCUGACAUCAa | 2 | 19 | 361 | 379 | [ce6:III:8232120-8232138:+] | 0.7017 | 160 | 7 | -18.27 | -1.0045 |
MIMAT0000698 | cel-miR-356 | 3564805 | C02F5.7 | acUAAACAAG--CGCAACGAGUu | ||| ||| : ||||||| | caAUUCAUUCAUCUAUUGCUCAa | 2 | 20 | 235 | 257 | [ce6:III:8231994-8232016:+] | 0.5923 | 146 | 7 | -10.01 | -1.3188 |
MIMAT0015121 | cel-miR-360* | 3564805 | C02F5.7 | acuggcauuguugcCAGUGUu | |||||| | uuugcaaauauuucGUCACAg | 2 | 8 | 602 | 622 | [ce6:III:8232662-8232682:+] | 0.4547 | 120 | 6 | -12.39 | -0.1546 |
MIMAT0005031 | cel-miR-1018 | 3564805 | C02F5.7 | gaCAUU--CAGGUUACUAGAGAGa | |||| |||| | |||||| | ugGUAAUUAUCCAUUUUUCUCUCu | 2 | 21 | 35 | 58 | [ce6:III:8231794-8231817:+] | 0.6222 | 131 | 6 | -18.05 | -0.1272 |
MIMAT0005031 | cel-miR-1018 | 3564805 | C02F5.7 | gaCAUU--CAGGUUACUAGAGAGa | |||| |||| | |||||| | ugGUAAUUAUCCAUUUUUCUCUCu | 2 | 21 | 35 | 58 | [ce6:III:8231794-8231817:+] | 0.6222 | 131 | 6 | -18.05 | -0.1177 |
MIMAT0005822 | cel-miR-1019* | 3564805 | C02F5.7 | uuuuacuuUGAGCUUGUUACGAGUg | |:|| :| |||||| | uucaauucAUUCAUCUAUUGCUCAa | 2 | 18 | 233 | 257 | [ce6:III:8231992-8232016:+] | 0.5923 | 121 | 6 | -11.34 | -0.5121 |
MIMAT0005033 | cel-miR-1020 | 3564805 | C02F5.7 | gacuuucACAGUGUCUUAUUa | ||||| ||||||| | cuuuuucUGUCA-AGAAUAAa | 2 | 15 | 552 | 571 | [ce6:III:8232450-8232469:+] | 0.4294 | 156 | 7 | -10.53 | -0.9568 |
MIMAT0005033 | cel-miR-1020 | 3564805 | C02F5.7 | gacuuucACAGUGUCUUAUUa | ||||| ||||||| | cuuuuucUGUCA-AGAAUAAa | 2 | 15 | 390 | 409 | [ce6:III:8232450-8232469:+] | 0.4294 | 156 | 7 | -10.53 | -0.9713 |
MIMAT0015266 | cel-miR-1822* | 3564805 | C02F5.7 | cggcuaucgaaagggucUCUUUGa | |||||| | ucaaaagguauguaaaaAGAAACa | 2 | 8 | 127 | 150 | [ce6:III:8231886-8231909:+] | 0.6222 | 120 | 6 | -6.86 | -0.1140 |
MIMAT0011427 | cel-miR-2208a | 3564805 | C02F5.7 | ccuauagucuaagcccAUGUGAa | |||||| | aguucuuguuauuuucUACACUu | 2 | 8 | 444 | 466 | [ce6:III:8232504-8232526:+] | 0.4294 | 120 | 6 | -9.34 | -0.1060 |
MIMAT0011429 | cel-miR-2208b-5p | 3564805 | C02F5.7 | ccuauagucuaggcccAUGUGAa | |||||| | aguucuuguuauuuucUACACUu | 2 | 8 | 444 | 466 | [ce6:III:8232504-8232526:+] | 0.4294 | 120 | 6 | -9.00 | -0.1071 |
MIMAT0011431 | cel-miR-2209a* | 3564805 | C02F5.7 | cuuccucuucucaccaAUGUGAg | |||||| | aguucuuguuauuuucUACACUu | 2 | 8 | 444 | 466 | [ce6:III:8232504-8232526:+] | 0.4294 | 120 | 6 | -6.80 | -0.1092 |
MIMAT0011433 | cel-miR-2209c* | 3564805 | C02F5.7 | uuuguucugcacgccaAUGUGAg | |||||| | aguucuuguuauuuucUACACUu | 2 | 8 | 444 | 466 | [ce6:III:8232504-8232526:+] | 0.4294 | 120 | 6 | -6.47 | -0.1071 |
MIMAT0011438 | cel-miR-2211 | 3564805 | C02F5.7 | aaaGAGGAGAUUUAAGAU-GGACu | :|||| | : ||||| |||| | guaUUCCU-UCGUUUCUAUCCUGa | 2 | 21 | 377 | 399 | [ce6:III:8232275-8232297:+] | 0.4294 | 126 | 0 | -19.80 | -0.6751 |
MIMAT0011438 | cel-miR-2211 | 3564805 | C02F5.7 | aaaGAGGAGAUUUAAGAU-GGACu | :|||| | : ||||| |||| | guaUUCCU-UCGUUUCUAUCCUGa | 2 | 21 | 215 | 237 | [ce6:III:8232275-8232297:+] | 0.4294 | 126 | 0 | -19.80 | -0.6299 |
MIMAT0011438 | cel-miR-2211 | 3564805 | C02F5.7 | aaaGAGGAGAUUUAAGAU-GGACu | :|||| | : ||||| |||| | guaUUCCU-UCGUUUCUAUCCUGa | 2 | 21 | 516 | 538 | [ce6:III:8232275-8232297:+] | 0.4294 | 126 | 0 | -19.80 | -0.6463 |
MIMAT0011443 | cel-miR-2214* | 3564805 | C02F5.7 | ggguaacugAGGCCUGG-CUUa | |:|||||| ||| | aaaaacauaUUCGGACCAGAAa | 2 | 13 | 623 | 644 | [ce6:III:8232683-8232704:+] | 0.4067 | 120 | 0 | -18.41 | -1.0010 |
MIMAT0011444 | cel-miR-2214 | 3564805 | C02F5.7 | uugcggccaguucAACAACAGUUac | || |||||| | aaauuauuuucuuUUUCUGUCAAga | 3 | 13 | 681 | 705 | [ce6:III:8232440-8232464:+] | 0.4294 | 124 | 0 | -7.49 | -0.1446 |
MIMAT0011448 | cel-miR-2216* | 3564805 | C02F5.7 | uccguguaAAAUUCAUCUAUc | | || ||||||: | uuuucaggUAUAUGUAGAUGc | 2 | 14 | 266 | 286 | [ce6:III:8232025-8232045:+] | 0.7017 | 133 | 0 | -14.33 | -0.1230 |
MIMAT0011454 | cel-miR-2209b | 3564805 | C02F5.7 | acuucguguuggcgaGUAGAGa | |||||| | cuuucaacuugcacaCAUCUCu | 2 | 8 | 70 | 91 | [ce6:III:8231829-8231850:+] | 0.6222 | 120 | 6 | -16.24 | -0.1032 |
MIMAT0011455 | cel-miR-2218a | 3564805 | C02F5.7 | acuccgAAU-UUUGAACAUCAAAc | ||| :|| ||||||| | ccaauaUUACCGAC--GUAGUUUc | 2 | 18 | 714 | 735 | [ce6:III:8232774-8232795:+] | 0.4067 | 141 | 7 | -5.50 | -0.2304 |
MIMAT0011458 | cel-miR-2218b* | 3564805 | C02F5.7 | agagugAUGUUUGA-UG-UUUAAa | |||||||| || ||||| | aacuggUACAAACUGACGAAAUUg | 2 | 17 | 200 | 223 | [ce6:III:8232098-8232121:+] | 0.7017 | 135 | 0 | -14.37 | -0.8284 |
MIMAT0011458 | cel-miR-2218b* | 3564805 | C02F5.7 | agagugauguuuGAUGUUUAAa | :|||||||| | uacuugcccucuUUACAAAUUc | 2 | 11 | 411 | 432 | [ce6:III:8232471-8232492:+] | 0.4294 | 146 | 7 | -11.39 | -0.6325 |
MIMAT0011458 | cel-miR-2218b* | 3564805 | C02F5.7 | agagugAUGUUUGA-UG-UUUAAa | |||||||| || ||||| | aacuggUACAAACUGACGAAAUUg | 2 | 17 | 38 | 61 | [ce6:III:8232098-8232121:+] | 0.7017 | 135 | 0 | -14.37 | -0.8257 |
MIMAT0011458 | cel-miR-2218b* | 3564805 | C02F5.7 | agagugAUGUUUGA-UG-UUUAAa | |||||||| || ||||| | aacuggUACAAACUGACGAAAUUg | 2 | 17 | 339 | 362 | [ce6:III:8232098-8232121:+] | 0.7017 | 135 | 0 | -14.37 | -0.7971 |
MIMAT0000043 | cel-miR-71 | 3564805 | C02F5.7 | agugaUGGGUACAGAAAGu | || ||| |||||| | cuugcACACAUCUCUUUCa | 2 | 15 | 77 | 95 | [ce6:III:8231836-8231854:+] | 0.6222 | 130 | 6 | -13.92 | -0.2936 |
MIMAT0000043 | cel-miR-71 | 3564805 | C02F5.7 | agugaUGGGUACAGAAAGu | || ||| |||||| | cuugcACACAUCUCUUUCa | 2 | 15 | 77 | 95 | [ce6:III:8231836-8231854:+] | 0.6222 | 130 | 6 | -13.92 | -0.2766 |
MIMAT0000048 | cel-miR-76 | 3564805 | C02F5.7 | aguuCCGAAGUAGUUGU-UGCUu | ||| | :|::||| |||| | guguGGC-UGGUUGACACACGAa | 2 | 19 | 164 | 185 | [ce6:III:8231923-8231944:+] | 0.5526 | 120 | 0 | -15.44 | -0.8667 |
MIMAT0000060 | cel-miR-87 | 3564805 | C02F5.7 | cgUGUGGACUUUGA-AACGAGUg | |: | | | || ||||||| | caAUUCAUUCAUCUAUUGCUCAa | 2 | 21 | 235 | 257 | [ce6:III:8231994-8232016:+] | 0.5923 | 147 | 7 | -12.56 | -1.3198 |
MIMAT0000288 | cel-miR-233 | 3564805 | C02F5.7 | ggcguGUACGCGUAACGAGUu | ||| | :|||||||| | ucauuCAU-C-UAUUGCUCAa | 2 | 17 | 239 | 257 | [ce6:III:8231998-8232016:+] | 0.5923 | 148 | 7 | -15.70 | -1.3183 |
MIMAT0000293 | cel-miR-238 | 3564805 | C02F5.7 | agacuuaccguagccUCAUGUUu | :|||||| | gaucuacagaaaacuGGUACAAa | 2 | 9 | 189 | 211 | [ce6:III:8232087-8232109:+] | 0.7017 | 124 | 6 | -9.36 | -0.1327 |
MIMAT0000293 | cel-miR-238 | 3564805 | C02F5.7 | agacuuaccguagccUCAUGUUu | :|||||| | gaucuacagaaaacuGGUACAAa | 2 | 9 | 27 | 49 | [ce6:III:8232087-8232109:+] | 0.7017 | 124 | 6 | -9.36 | -0.1158 |
MIMAT0000293 | cel-miR-238 | 3564805 | C02F5.7 | agacuuaccguagccUCAUGUUu | :|||||| | gaucuacagaaaacuGGUACAAa | 2 | 9 | 328 | 350 | [ce6:III:8232087-8232109:+] | 0.7017 | 124 | 6 | -9.36 | -0.1216 |
MIMAT0000294 | cel-miR-239a | 3564805 | C02F5.7 | ggucAUGGAUACACAUCAUGUUu | ||| | |:|||||| | gaucUACAGAAAACUGGUACAAa | 2 | 20 | 189 | 211 | [ce6:III:8232087-8232109:+] | 0.7017 | 131 | 6 | -12.13 | -0.1340 |
MIMAT0000294 | cel-miR-239a | 3564805 | C02F5.7 | ggucAUGGAUACACAUCAUGUUu | ||| | |:|||||| | gaucUACAGAAAACUGGUACAAa | 2 | 20 | 27 | 49 | [ce6:III:8232087-8232109:+] | 0.7017 | 131 | 6 | -12.13 | -0.1170 |
MIMAT0000294 | cel-miR-239a | 3564805 | C02F5.7 | ggucAUGGAUACACAUCAUGUUu | ||| | |:|||||| | gaucUACAGAAAACUGGUACAAa | 2 | 20 | 328 | 350 | [ce6:III:8232087-8232109:+] | 0.7017 | 131 | 6 | -12.13 | -0.1228 |
MIMAT0000295 | cel-miR-239b | 3564805 | C02F5.7 | gucaugaaaacacAUCAUGUUu | |:|||||| | aucuacagaaaacUGGUACAAa | 2 | 10 | 190 | 211 | [ce6:III:8232088-8232109:+] | 0.7017 | 129 | 6 | -10.72 | -0.1367 |
MIMAT0000295 | cel-miR-239b | 3564805 | C02F5.7 | gucaugaaaacacAUCAUGUUu | |:|||||| | aucuacagaaaacUGGUACAAa | 2 | 10 | 28 | 49 | [ce6:III:8232088-8232109:+] | 0.7017 | 129 | 6 | -10.72 | -0.1193 |
MIMAT0000295 | cel-miR-239b | 3564805 | C02F5.7 | gucaugaaaacacAUCAUGUUu | |:|||||| | aucuacagaaaacUGGUACAAa | 2 | 10 | 329 | 350 | [ce6:III:8232088-8232109:+] | 0.7017 | 129 | 6 | -10.72 | -0.1253 |
MIMAT0000298 | cel-miR-242 | 3564805 | C02F5.7 | agcuuCGUUUCCGGAUGCGUu | || | :||||||: | uauguGCCCUGUUCUACGCGa | 2 | 17 | 170 | 190 | [ce6:III:8232068-8232088:+] | 0.7017 | 128 | 0 | -16.17 | -0.1267 |
MIMAT0000298 | cel-miR-242 | 3564805 | C02F5.7 | agcuuCGUUUCCGGAUGCGUu | || | :||||||: | uauguGCCCUGUUCUACGCGa | 2 | 17 | 309 | 329 | [ce6:III:8232068-8232088:+] | 0.7017 | 128 | 0 | -16.17 | -0.1152 |
MIMAT0000300 | cel-miR-244 | 3564805 | C02F5.7 | guaUGGUGAAA-C-AUGUUGGUUUcu | |: | ||| | | : |||||| | agcAUAAGUUUAGAUUUUACCAAAaa | 3 | 22 | 670 | 695 | [ce6:III:8232730-8232755:+] | 0.4067 | 127 | 0 | -8.35 | -0.1402 |
MIMAT0000307 | cel-miR-251 | 3564805 | C02F5.7 | uuauucUCGCCGUGGUGAUGAAUu | || :| :|||||||| | aucucuAGACUUAAUACUACUUAu | 2 | 19 | 204 | 227 | [ce6:III:8231963-8231986:+] | 0.4830 | 150 | 7 | -11.51 | -1.1267 |
MIMAT0000308 | cel-miR-252 | 3564805 | C02F5.7 | aauggacgccGUGAUGAUGAAUa | :| ||||||||| | ucucuagacuUAAUACUACUUAu | 2 | 14 | 205 | 227 | [ce6:III:8231964-8231986:+] | 0.4830 | 153 | 7 | -13.34 | -1.1267 |
MIMAT0000310 | cel-miR-254 | 3564805 | C02F5.7 | ggaUGUCAGCGCUUUCUAAACGu | | |||: | ||||||| | uaaAAAGUUAAACAUGAUUUGCa | 2 | 21 | 585 | 607 | [ce6:III:8232645-8232667:+] | 0.5027 | 148 | 7 | -11.98 | -1.2471 |
MIMAT0000700 | cel-miR-358 | 3564805 | C02F5.7 | cuggaacugucccuAUGGUUa | |||||| | auaaguuuagauuuUACCAAa | 2 | 8 | 673 | 693 | [ce6:III:8232733-8232753:+] | 0.4067 | 120 | 6 | -6.80 | -0.1759 |
MIMAT0004219 | cel-miR-784 | 3564805 | C02F5.7 | agAUGCAUGCGUCUA-ACACGGu | ||:| :||| | |||||| | cuUAUGACUGCAUCUAUGUGCCc | 2 | 21 | 156 | 178 | [ce6:III:8232054-8232076:+] | 0.7017 | 124 | 6 | -16.54 | -0.9583 |
MIMAT0004219 | cel-miR-784 | 3564805 | C02F5.7 | agAUGCAUGCGUCUA-ACACGGu | ||:| :||| | |||||| | cuUAUGACUGCAUCUAUGUGCCc | 2 | 21 | 295 | 317 | [ce6:III:8232054-8232076:+] | 0.7017 | 124 | 6 | -16.54 | -0.9340 |
MIMAT0004220 | cel-miR-785 | 3564805 | C02F5.7 | agAUGUGU-UUUGU-UAAG-UGAAu | | |||| ||||| ||| |||| | ucUUCACACAAACACUUUCAACUUg | 2 | 21 | 56 | 80 | [ce6:III:8231815-8231839:+] | 0.6222 | 130 | 0 | -15.64 | -1.0425 |
MIMAT0004220 | cel-miR-785 | 3564805 | C02F5.7 | agAUGUGU-UUUGU-UAAG-UGAAu | | |||| ||||| ||| |||| | ucUUCACACAAACACUUUCAACUUg | 2 | 21 | 56 | 80 | [ce6:III:8231815-8231839:+] | 0.6222 | 130 | 0 | -15.64 | -1.0212 |
MIMAT0004222 | cel-miR-787 | 3564805 | C02F5.7 | gcUUUCUAU-GAUUUUGC-UCGAAu | ||: | | ||| : || ||||| | uuAAGCAAACCUACGUCGAAGCUUa | 2 | 22 | 742 | 766 | [ce6:III:8232802-8232826:+] | 0.6921 | 120 | 0 | -10.73 | -0.5303 |
MIMAT0004227 | cel-miR-792 | 3564805 | C02F5.7 | agacUUUCAACUUCU-CUAAA-GUu | |||||| || | ||||| || | guaaAAAGUUAAACAUGAUUUGCAa | 2 | 20 | 584 | 608 | [ce6:III:8232644-8232668:+] | 0.5027 | 134 | 0 | -8.67 | -1.1380 |
MIMAT0004227 | cel-miR-792 | 3564805 | C02F5.7 | agacuuUCAACUUCUCUAAAGUu | | || | |||||||| | aauacuACUU-AUUAGAUUUCAa | 2 | 18 | 216 | 237 | [ce6:III:8231975-8231996:+] | 0.4830 | 147 | 7 | -9.36 | -1.2661 |