DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015096 cel-miR-46* 181076 SR-famC gacaguuaucugcCGAGAGAa |:||||| uucauuuuuuaauGUUCUCUa 2 9 403 423 [ce6:X:8185156-8185176:-] 0.4993 124 0 -9.31 -0.1670 MIMAT0015097 cel-miR-47* 181076 SR-famC ugacaguuaucUGACGAGAGAa | ||:||||| auucauuuuuuAAUGUUCUCUa 2 12 402 423 [ce6:X:8185156-8185177:-] 0.4993 131 0 -10.91 -0.1670 MIMAT0015102 cel-miR-60* 181076 SR-famC uaAAAUACCGUGAGAAGGUCAa ||||| |: | |||||||| caUUUAU-GUUC-CUUCCAGUu 2 21 51 70 [ce6:X:8185509-8185528:-] 0.5621 160 7 -18.71 -0.4421 MIMAT0015114 cel-miR-238* 181076 SR-famC cgaaacuugcagGCUCUUGUAGgu | | |||||| auuguccaauaaCAAAAACAUCaa 3 13 168 191 [ce6:X:8185388-8185411:-] 0.5248 124 0 -10.21 -0.1286 MIMAT0015114 cel-miR-238* 181076 SR-famC cgaaacuugcaggcUCUUGUAGgu | |||||| uucauucuguauaaAAAACAUCac 3 11 20 43 [ce6:X:8185536-8185559:-] 0.5993 122 0 -8.47 -0.1316 MIMAT0015114 cel-miR-238* 181076 SR-famC cgaaacuugcagGCUCUUGUAGgu | | |||||| auuguccaauaaCAAAAACAUCaa 3 13 77 100 [ce6:X:8185388-8185411:-] 0.5248 124 0 -10.21 -0.1425 MIMAT0015115 cel-miR-239b* 181076 SR-famC aaAAACGUGUGGUGUUUUCACg | || ::||| ||||||| guUGUGAUUGCCA-AAAAGUGu 2 21 267 287 [ce6:X:8185292-8185312:-] 0.5248 154 7 -13.14 -0.6236 MIMAT0015115 cel-miR-239b* 181076 SR-famC aaAAACGUGUGGUGUUUUCACg | || ::||| ||||||| guUGUGAUUGCCA-AAAAGUGu 2 21 176 196 [ce6:X:8185292-8185312:-] 0.5248 154 7 -13.14 -0.6619 MIMAT0015119 cel-miR-247* 181076 SR-famC ccauUAAUCUUUGAAAAGAGau ||| ||| ||||||| uuccAUUCCAAA-UUUUCUCcu 3 19 146 166 [ce6:X:8185413-8185433:-] 0.5248 140 0 -6.47 -0.1319 MIMAT0015119 cel-miR-247* 181076 SR-famC ccauuaaucuuugaaAAGAGAu |||||| auucauuuuuuaaugUUCUCUa 2 8 402 423 [ce6:X:8185156-8185177:-] 0.4993 120 6 -8.86 -0.5855 MIMAT0015119 cel-miR-247* 181076 SR-famC ccauUAAUCUUUGAAAAGAGau ||| ||| ||||||| uuccAUUCCAAA-UUUUCUCcu 3 19 55 75 [ce6:X:8185413-8185433:-] 0.5248 140 0 -6.47 -0.1456 MIMAT0000311 cel-miR-256 181076 SR-famC auGUCAGAAGAUACGUAAGGu || ||||: | |||||| ucCA-UCUUU--UCCAUUCCa 2 20 138 155 [ce6:X:8185424-8185441:-] 0.5248 122 6 -14.20 -0.3416 MIMAT0000311 cel-miR-256 181076 SR-famC auGUCAGAAGAUACGUAAGGu || ||||: | |||||| ucCA-UCUUU--UCCAUUCCa 2 20 47 64 [ce6:X:8185424-8185441:-] 0.5248 122 6 -14.20 -0.3710 MIMAT0000315 cel-miR-260 181076 SR-famC gauguucucaagcUGUAGUg |||||| uucuguauaaaaaACAUCAc 2 8 24 43 [ce6:X:8185536-8185555:-] 0.5993 120 6 -11.56 -0.1600 MIMAT0000315 cel-miR-260 181076 SR-famC gauguucucaagcUGUAGUg |||||| uccaauaacaaaaACAUCAa 2 8 172 191 [ce6:X:8185388-8185407:-] 0.5248 120 6 -6.54 -0.1426 MIMAT0000315 cel-miR-260 181076 SR-famC gauguucucaagcUGUAGUg |||||| uccaauaacaaaaACAUCAa 2 8 81 100 [ce6:X:8185388-8185407:-] 0.5248 120 6 -6.54 -0.1578 MIMAT0000321 cel-miR-265 181076 SR-famC uaUGGUGGGAAGGAGGGAGu | :||::||:||||||| acAGUACUUUUUCUCCCUCu 2 19 220 239 [ce6:X:8185340-8185359:-] 0.5248 166 7 -24.72 -1.1418 MIMAT0000321 cel-miR-265 181076 SR-famC uaUGGUGGGAAGGAGGGAGu | :||::||:||||||| acAGUACUUUUUCUCCCUCu 2 19 129 148 [ce6:X:8185340-8185359:-] 0.5248 166 7 -24.72 -1.1623 MIMAT0000698 cel-miR-356 181076 SR-famC acUAAACAAGCGCAAC-GAGUu :|| ||| |||| |||| auGUUCCUUCCAGUUGUCUCAa 2 20 56 77 [ce6:X:8185502-8185523:-] 0.5621 123 0 -13.68 -0.7940 MIMAT0015240 cel-miR-788* 181076 SR-famC gcuaAGAUUAGGUAAAGg ||| |||||| | uccaUCUUUUCCAUUCCa 2 15 138 155 [ce6:X:8185424-8185441:-] 0.5248 122 0 -14.58 -0.1342 MIMAT0015240 cel-miR-788* 181076 SR-famC gcuaAGAUUAGGUAAAGg ||| |||||| | uccaUCUUUUCCAUUCCa 2 15 47 64 [ce6:X:8185424-8185441:-] 0.5248 122 0 -14.58 -0.1483 MIMAT0005032 cel-miR-1019 181076 SR-famC gaccuuucguuacaccuUAAUGUc |||||| caagucaucaucucuucAUUACAu 2 8 380 403 [ce6:X:8185176-8185199:-] 0.5120 120 6 -2.84 -0.1376 MIMAT0006586 cel-miR-1819 181076 SR-famC agGUAGUUCGAGUUAGUAAGGu |:|: :|: ||||||: cgCGUUCUUUUUUUUCAUUCUg 2 21 7 28 [ce6:X:8185551-8185572:-] 0.5993 128 0 -10.14 -0.2001 MIMAT0006586 cel-miR-1819 181076 SR-famC agguAGUUCGAGUUAGUAAGGu || | ||: |||||| cuuuUCCAUCUUUUCCAUUCCa 2 19 134 155 [ce6:X:8185424-8185445:-] 0.5248 122 6 -18.46 -0.3472 MIMAT0006586 cel-miR-1819 181076 SR-famC agguAGUUCGAGUUAGUAAGGu || | ||: |||||| cuuuUCCAUCUUUUCCAUUCCa 2 19 43 64 [ce6:X:8185424-8185445:-] 0.5248 122 6 -18.46 -0.3769 MIMAT0006590 cel-miR-1823 181076 SR-famC aaUGAGGAUUUGUGAAGGUCAu |:|: |: | |||||||| ucAUUUAUGUUC-CUUCCAGUu 2 21 50 70 [ce6:X:8185509-8185529:-] 0.5621 150 7 -14.97 -0.4453 MIMAT0006768 cel-miR-1828 181076 SR-famC ugAUAGUGAAU-UUACGAAGGUCa |:|||:||| : | ||||||| uaUGUCAUUUAUGUUCCUUCCAGu 2 22 46 69 [ce6:X:8185510-8185533:-] 0.5621 168 7 -21.69 -0.6784 MIMAT0011431 cel-miR-2209a* 181076 SR-famC cuuccucuucucACCAAUGUGAg || ||||||| cucauguuaaccUGUUUACACUu 2 12 311 333 [ce6:X:8185246-8185268:-] 0.5248 147 7 -8.40 -0.9659 MIMAT0011431 cel-miR-2209a* 181076 SR-famC cuuccucuucucACCAAUGUGAg || ||||||| cucauguuaaccUGUUUACACUu 2 12 220 242 [ce6:X:8185246-8185268:-] 0.5248 147 7 -8.40 -1.0003 MIMAT0011433 cel-miR-2209c* 181076 SR-famC uuuguucUGCACGCCAAUGUGAg || ||: ||||||| cauguuaACCUGU--UUACACUu 2 17 313 333 [ce6:X:8185246-8185266:-] 0.5248 145 7 -9.93 -0.9319 MIMAT0011433 cel-miR-2209c* 181076 SR-famC uuuguucUGCACGCCAAUGUGAg || ||: ||||||| cauguuaACCUGU--UUACACUu 2 17 222 242 [ce6:X:8185246-8185266:-] 0.5248 145 7 -9.93 -0.9680 MIMAT0011451 cel-miR-2217* 181076 SR-famC cuAGCUGUGGCUGACG-GGUGAGAc || ::|: | | :|||||| auUCUGUAUAAAAAACAUCACUCUa 2 23 23 47 [ce6:X:8185532-8185556:-] 0.5993 125 6 -13.06 -0.2438 MIMAT0011454 cel-miR-2209b 181076 SR-famC acUUCGUGUUGGCGAGUAGAGa || :|||| : ||||||| ucAAAUACAAGUCAUCAUCUCu 2 21 373 394 [ce6:X:8185185-8185206:-] 0.5120 160 7 -16.67 -1.1189 MIMAT0011458 cel-miR-2218b* 181076 SR-famC agaGUGAU-GUUUGAUGUUUAAa || || :::| | |||||| ugaCAGUAUUGGAAUCCAAAUUc 2 20 352 374 [ce6:X:8185205-8185227:-] 0.5248 126 6 -6.39 -0.1306 MIMAT0011458 cel-miR-2218b* 181076 SR-famC agaGUGAU-GUUUGAUGUUUAAa || || :::| | |||||| ugaCAGUAUUGGAAUCCAAAUUc 2 20 261 283 [ce6:X:8185205-8185227:-] 0.5248 126 6 -6.39 -0.2411 MIMAT0014446 cel-miR-2953-5p 181076 SR-famC uaaaagugcuugugAAGACAu |||||| guucuuuuuuuucaUUCUGUa 2 8 10 30 [ce6:X:8185549-8185569:-] 0.5993 120 6 -9.16 -0.9896 MIMAT0000003 cel-miR-1 181076 SR-famC auGUA-UGAAGAAAUGUAAGgu ||| |||| |||||||| auCAUCUCUUCAUUACAUUCau 3 20 386 407 [ce6:X:8185172-8185193:-] 0.5120 150 0 -15.66 -0.1960 MIMAT0000003 cel-miR-1 181076 SR-famC auguAUGAAG-AAAUGUAAGGu | | || ||| |||||| cuuuUCCAUCUUUUCCAUUCCa 2 18 134 155 [ce6:X:8185424-8185445:-] 0.5248 128 6 -14.31 -0.3472 MIMAT0000003 cel-miR-1 181076 SR-famC auguAUGAAG-AAAUGUAAGGu | | || ||| |||||| cuuuUCCAUCUUUUCCAUUCCa 2 18 43 64 [ce6:X:8185424-8185445:-] 0.5248 128 6 -14.31 -0.3769 MIMAT0000035 cel-miR-63 181076 SR-famC aaaggUUG-AGCGAAGUCACAGUAu ||| || | || |||||| uaaaaAACAUCAC-UCUAUGUCAUu 2 20 31 54 [ce6:X:8185525-8185548:-] 0.5993 124 6 -11.56 -0.1137 MIMAT0000036 cel-miR-64 181076 SR-famC aagccauugcgaagucACAGUAu |||||| aaaaaacaucacucuaUGUCAUu 2 8 32 54 [ce6:X:8185525-8185547:-] 0.5993 120 6 -8.22 -0.1137 MIMAT0000037 cel-miR-65 181076 SR-famC aagccaaugcgaagucACAGUAu |||||| aaaaaacaucacucuaUGUCAUu 2 8 32 54 [ce6:X:8185525-8185547:-] 0.5993 120 6 -8.22 -0.1137 MIMAT0000038 cel-miR-66 181076 SR-famC agUGUAGGGAUUAGUCACAGUAc ||||| | || |||||| aaACAUC---ACUCUAUGUCAUu 2 22 35 54 [ce6:X:8185525-8185544:-] 0.5993 125 6 -12.40 -0.1160 MIMAT0000053 cel-miR-80 181076 SR-famC agccgAAAGUUGAUUACUAGAGu |||: :||||| |||| auucaUUUU--UUAAUGUUCUCu 2 19 402 422 [ce6:X:8185157-8185177:-] 0.4993 127 0 -12.34 -0.1017 MIMAT0000284 cel-miR-229 181076 SR-famC gcUACCUUUUCUAUUG-GUCACAGUAa || |||| || || | |||||| guAUAAAAAACAUCACUCUAUGUCAUu 2 25 28 54 [ce6:X:8185525-8185551:-] 0.5993 139 6 -9.31 -0.1148 MIMAT0000291 cel-miR-236 181076 SR-famC ucgcAGUAAUGGACUGUCAUAAu |: ||::||||||||||| auuuUUCUUGUCUGACAGUAUUg 2 20 340 362 [ce6:X:8185217-8185239:-] 0.5248 175 7 -22.83 -0.6067 MIMAT0000291 cel-miR-236 181076 SR-famC ucgcAGUAAUGGACUGUCAUAAu |: ||::||||||||||| auuuUUCUUGUCUGACAGUAUUg 2 20 249 271 [ce6:X:8185217-8185239:-] 0.5248 175 7 -22.83 -0.6910 MIMAT0000697 cel-miR-355 181076 SR-famC guaucgaguccgaUUUUGUuu |||||| ucauucuguauaaAAAACAuc 3 9 21 41 [ce6:X:8185538-8185558:-] 0.5993 120 0 -4.20 -0.1144 MIMAT0004227 cel-miR-792 181076 SR-famC agACUUUCAACUUCUCUAAAGUu || || | | |||||:| uuUGUAAAAUAUAUUGAUUUUAa 2 22 430 452 [ce6:X:8185127-8185149:-] 0.4904 133 0 -6.65 -0.1092 MIMAT0004231 cel-miR-796 181076 SR-famC aaugauuGGAGUUGAUGUAAGgu :||: |:||||||| caucaucUCUUCAUUACAUUCau 3 17 385 407 [ce6:X:8185172-8185194:-] 0.5120 140 0 -15.55 -0.1960 MIMAT0004231 cel-miR-796 181076 SR-famC aaugauuggaguugauGUAAGGu |||||| ucuuuuccaucuuuucCAUUCCa 2 8 133 155 [ce6:X:8185424-8185446:-] 0.5248 120 6 -15.97 -0.3472 MIMAT0004231 cel-miR-796 181076 SR-famC aaugauuggaguugauGUAAGGu |||||| ucuuuuccaucuuuucCAUUCCa 2 8 42 64 [ce6:X:8185424-8185446:-] 0.5248 120 6 -15.97 -0.3769

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score C17H11.6 RAID00039434 cel-miR-355-5p miRNA MIMAT0000697 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID00116772 cel-miR-247-3p miRNA MIMAT0000303 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID00886048 cel-miR-792-3p miRNA MIMAT0004227 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID01001428 cel-miR-61-3p miRNA MIMAT0000033 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID01281482 cel-miR-64-5p miRNA MIMAT0000036 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID01722917 cel-miR-65-5p miRNA MIMAT0000037 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID01824654 cel-miR-229-5p miRNA MIMAT0000284 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID01837604 cel-miR-250-3p miRNA MIMAT0000306 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID01889453 cel-miR-1-3p miRNA MIMAT0000003 C17H11.6 mRNA 181076 Prediction 0.2202 C17H11.6 RAID01891864 cel-miR-63-3p miRNA MIMAT0000035 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID02085153 cel-miR-796 miRNA MIMAT0004231 C17H11.6 mRNA 181076 Prediction 0.2202 C17H11.6 RAID02187032 cel-miR-66-5p miRNA MIMAT0000038 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID03052404 cel-miR-44-3p miRNA MIMAT0000015 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID03214689 cel-miR-236-3p miRNA MIMAT0000291 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID03503435 cel-miR-45-3p miRNA MIMAT0000016 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID03702835 cel-miR-67-3p miRNA MIMAT0000039 C17H11.6 mRNA 181076 Prediction 0.1828 C17H11.6 RAID03927443 cel-miR-80-3p miRNA MIMAT0000053 C17H11.6 mRNA 181076 Prediction 0.1828