DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015112 cel-miR-229* 177486 C34D4.14 gauacUGUGGGCUA-UGGAA-AGa |: |::||| ||||| || -----AUUCUUGAUAACCUUAUCa 2 18 1 19 [ce6:IV:7134821-7134839:-] 0.5064 120 0 -11.78 -1.2046 MIMAT0015119 cel-miR-247* 177486 C34D4.14 ccauuaaucuUUGAAAAGAGAu ||||||||||| cucuugauccAACUUUUCUCUu 2 13 65 86 [ce6:IV:7134754-7134775:-] 0.5064 160 7 -13.91 -0.8539 MIMAT0015119 cel-miR-247* 177486 C34D4.14 ccauuaaucuuUGAAAAGAGAu ::|||||||| uccugcguuguGUUUUUCUCUu 2 12 135 156 [ce6:IV:7134684-7134705:-] 0.5064 147 7 -10.02 -0.9221 MIMAT0015119 cel-miR-247* 177486 C34D4.14 ccAUUAAUCUUUGAAAAGAGau | :|| | || ||||||| aaUCGUUUGCAA-UUUUCUCaa 3 21 202 222 [ce6:IV:7134618-7134638:-] 0.5064 138 0 -6.47 -0.1648 MIMAT0000321 cel-miR-265 177486 C34D4.14 uauGGUGGGAAGGAGG-GAGu :|:|: ||:|||| ||| cccUCGCUGUUUCUCCUCUCc 2 18 431 451 [ce6:IV:7134389-7134409:-] 0.5064 125 0 -20.31 -0.4517 MIMAT0000702 cel-miR-360 177486 C34D4.14 aaCACUUGCCCUAAUGCCAGu | |||: ||||||| uaGAGAAUUAUUGUACGGUCg 2 20 230 250 [ce6:IV:7134590-7134610:-] 0.5064 143 7 -16.37 -0.4518 MIMAT0015240 cel-miR-788* 177486 C34D4.14 gcuaagauuagGUAAAGg |||||| uuuuacaauuaCAUUUCa 2 8 357 374 [ce6:IV:7134466-7134483:-] 0.5064 120 6 -6.94 -0.1445 MIMAT0015241 cel-miR-797* 177486 C34D4.14 uaAAGUGUCUUUG---GUUACUUUu || :|: |||: ||||||| uuUUGGCGAAAAUAAAGAAUGAAAu 2 21 480 504 [ce6:IV:7134336-7134360:-] 0.5064 147 7 -8.83 -0.7793 MIMAT0005032 cel-miR-1019 177486 C34D4.14 gacCUUU--CGUUACACCUUAAUGUc |||| | | | ||||||| gcuGAAAUUUCUUUUUACAAUUACAu 2 22 345 370 [ce6:IV:7134470-7134495:-] 0.5064 144 7 -5.78 -0.8595 MIMAT0006771 cel-miR-1829c 177486 C34D4.14 auGUUGGUAGAACUU----AAAGCGAa ||||: :|| |: ||||||| ccCAACUUGUUUCAGCUAUUUUCGCUg 2 22 322 348 [ce6:IV:7134492-7134518:-] 0.5064 148 7 -14.40 -0.7761 MIMAT0011430 cel-miR-2208b-3p 177486 C34D4.14 acuucacaugGUUUUAGA-CGUa :||||||| ||| cuuggccccgUAAAAUCUAGCAu 2 13 280 302 [ce6:IV:7134538-7134560:-] 0.5064 120 0 -12.11 -0.9077 MIMAT0011434 cel-miR-2209c 177486 C34D4.14 acaucacauuggccacCAGAAAa |||||| guuguguuuuucucuuGUCUUUa 2 8 141 163 [ce6:IV:7134677-7134699:-] 0.5064 120 6 -10.38 -0.1469 MIMAT0011444 cel-miR-2214 177486 C34D4.14 uugcggccAGUUCAACAAC-AGUUAc |:|| | ||| ||||| ucuugucuUUAACUAUUUGUUCAAUa 2 18 153 178 [ce6:IV:7134662-7134687:-] 0.5064 121 0 -6.81 -1.1997 MIMAT0011454 cel-miR-2209b 177486 C34D4.14 acuucguguuGGCGAGUAGAGa |: |||||||| ucccuucuuuCUCCUCAUCUCa 2 13 87 108 [ce6:IV:7134732-7134753:-] 0.5064 148 7 -12.78 -0.8021 MIMAT0011456 cel-miR-2218a* 177486 C34D4.14 auguuuGAUGUGAUAAG--ACCGGa ||||| ||||| ||||| acuccuCUACAGUAUUCCUUGGCCc 2 18 263 287 [ce6:IV:7134553-7134577:-] 0.5064 125 0 -20.54 -0.4704 MIMAT0011462 cel-miR-2220 177486 C34D4.14 gacauucAGGUGUUUGUUAAcu ||: : |||||| ugaaauuUCUUUUUACAAUUac 3 16 347 368 [ce6:IV:7134472-7134493:-] 0.5064 123 0 -4.54 -0.1281 MIMAT0011462 cel-miR-2220 177486 C34D4.14 gacauucagguguuuGUUAACu |||||| aucacuauaucaauuCAAUUGc 2 8 16 37 [ce6:IV:7134803-7134824:-] 0.5064 120 6 -8.31 -0.2774 MIMAT0011463 cel-miR-2221 177486 C34D4.14 ugaucgccagaccAUAGUGAac ||||||| uucuugauaaccuUAUCACUau 3 10 2 23 [ce6:IV:7134817-7134838:-] 0.5064 125 0 -6.69 -0.1005 MIMAT0000034 cel-miR-62 177486 C34D4.14 gacAUUCGAUCUAAUG-UAUAGu ||| || || || ||||| ugaUAACCU-UAUCACUAUAUCa 2 20 6 27 [ce6:IV:7134813-7134834:-] 0.5064 121 0 -7.16 -1.1435 MIMAT0000043 cel-miR-71 177486 C34D4.14 aguGAUGGGUACAGAAAgu :| |:| ||||||| guuUUUCUCUUGUCUUUaa 3 17 146 164 [ce6:IV:7134676-7134694:-] 0.5064 136 0 -10.58 -0.1185 MIMAT0000291 cel-miR-236 177486 C34D4.14 ucGCAGUA--AUGGACUGUCAUAAu | |||| | |: |||||||| gcCUUCAUACUCCUCUACAGUAUUc 2 22 255 279 [ce6:IV:7134561-7134585:-] 0.5064 156 7 -14.74 -0.4093 MIMAT0000293 cel-miR-238 177486 C34D4.14 agACUUACCG-UAGCCUCAUGUUu | ||| || ||: |||||| auUCAAUUGCUAUUUUUGUACAAa 2 22 28 51 [ce6:IV:7134789-7134812:-] 0.5064 128 6 -8.90 -0.1972 MIMAT0000294 cel-miR-239a 177486 C34D4.14 ggUCAUGGAUACACAUCAUGUUu | | |||| | | |||||| ucAAUUGCUAU-UUUUGUACAAa 2 22 30 51 [ce6:IV:7134789-7134810:-] 0.5064 127 6 -10.07 -0.1936 MIMAT0000295 cel-miR-239b 177486 C34D4.14 gucAUGAAAACACAUCAUGUUu |:|| || | | |||||| aauUGCUAUU-U-UUGUACAAa 2 20 32 51 [ce6:IV:7134789-7134808:-] 0.5064 123 6 -8.54 -0.1954 MIMAT0004227 cel-miR-792 177486 C34D4.14 agacuuucaacuucucUAAAGUu |||||| uucuuuuuacaauuacAUUUCAa 2 8 353 375 [ce6:IV:7134465-7134487:-] 0.5064 120 6 -4.33 -0.1181

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score hecd-1 RAID00107595 cel-miR-239b-5p miRNA MIMAT0000295 hecd-1 mRNA 177486 Prediction 0.1828 hecd-1 RAID01145085 cel-miR-62 miRNA MIMAT0000034 hecd-1 mRNA 177486 CLIP-seq//Prediction 0.6308 hecd-1 RAID01955874 cel-miR-239a-5p miRNA MIMAT0000294 hecd-1 mRNA 177486 Prediction 0.1828 hecd-1 RAID02220906 cel-miR-792-3p miRNA MIMAT0004227 hecd-1 mRNA 177486 Prediction 0.1828 hecd-1 RAID02643589 cel-miR-71-5p miRNA MIMAT0000043 hecd-1 mRNA 177486 Prediction 0.1828 hecd-1 RAID02924103 cel-miR-236-3p miRNA MIMAT0000291 hecd-1 mRNA 177486 Prediction 0.1828 hecd-1 RAID03332977 cel-miR-238-3p miRNA MIMAT0000293 hecd-1 mRNA 177486 Prediction 0.1828