DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015094 cel-miR-37* 178959 F25B4.2 cguGGCGUUGCCUGUGGGUGu || ::| ||||||| aauCCCUGAAUUUCACCCACa 2 19 251 271 [ce6:V:5712173-5712193:+] 0.5232 142 7 -18.20 -1.2439 MIMAT0015095 cel-miR-42* 178959 F25B4.2 gaaguggcuuuuucguuuGUGGGUg |||||| uuguaaaucccugaauuuCACCCAc 2 8 246 270 [ce6:V:5712168-5712192:+] 0.5232 120 6 -18.14 -0.1166 MIMAT0015112 cel-miR-229* 178959 F25B4.2 gauacUGUGGGCUAUGGAAAGa || ||| ||||||| cacacACCCCCACCACCUUUCa 2 18 91 112 [ce6:V:5712013-5712034:+] 0.5232 153 7 -17.94 -0.5033 MIMAT0015112 cel-miR-229* 178959 F25B4.2 gauACUGUGGGCUA---UGGAAAGa || ||:| || ||||||| accUGUCAUCGAAUAUCACCUUUCg 2 20 195 219 [ce6:V:5712117-5712141:+] 0.5232 150 7 -13.84 -0.4283 MIMAT0015119 cel-miR-247* 178959 F25B4.2 ccaUUA-AUCUUUGAAAAGAGAu ||| |:||||:|||||||| gaaAAUCUGGAAAUUUUUCUCUg 2 20 141 163 [ce6:V:5712063-5712085:+] 0.5232 178 7 -19.90 -1.0089 MIMAT0015119 cel-miR-247* 178959 F25B4.2 ccAUUAAUCUUUGAAAAGA-GAu |||||: : | |||||| || uaUAAUUGUGUA-UUUUCUACUa 2 21 275 296 [ce6:V:5712197-5712218:+] 0.5232 126 0 -9.67 -1.1018 MIMAT0000313 cel-miR-258 178959 F25B4.2 uuuuccuaaGGAGAGUUUUGg |||:||||||| cccccaccaCCUUUCAAAACc 2 13 97 117 [ce6:V:5712019-5712039:+] 0.5232 156 7 -19.74 -0.4211 MIMAT0000316 cel-miR-261 178959 F25B4.2 gcacuuuugauuUUUCGAu |||||| ucuacuaacgucAAAGCUu 2 8 290 308 [ce6:V:5712212-5712230:+] 0.5232 120 6 -8.08 -0.1887 MIMAT0011454 cel-miR-2209b 178959 F25B4.2 acuucGUGUUGGC--GAG-UAGAGa || ||||| ||| ||||| ccuuuCAAAACCGGUCUCUAUCUCu 2 18 106 130 [ce6:V:5712028-5712052:+] 0.5232 128 0 -19.52 -0.3715 MIMAT0011459 cel-miR-2219* 178959 F25B4.2 cugcuacacgcucucUUUCGAca |||||| uuuucuacuaacgucAAAGCUuu 3 9 287 309 [ce6:V:5712209-5712231:+] 0.5232 120 0 -6.78 -0.1001 MIMAT0011463 cel-miR-2221 178959 F25B4.2 ugaucgccagaccaUAGUGAAc ||||||| uuuucugaaucauaAUCACUUc 2 9 49 70 [ce6:V:5711971-5711992:+] 0.5232 140 7 -8.01 -0.9652 MIMAT0014446 cel-miR-2953-5p 178959 F25B4.2 uaaaAGUGCUUGUGAAGACAu |||: | ||||||||| ugaaUCAUAAUCACUUCUGUu 2 18 54 74 [ce6:V:5711976-5711996:+] 0.5232 165 7 -17.47 -1.0369 MIMAT0000038 cel-miR-66 178959 F25B4.2 aguguAGGGA--UUAGUCAC-AGUAc ||:|| |||: ||| |||| auuuuUCUCUGAAAUUUGUGUUCAUc 2 19 153 178 [ce6:V:5712075-5712100:+] 0.5232 125 0 -11.22 -0.8570 MIMAT0000047 cel-miR-75 178959 F25B4.2 acuucggccaaccaUCGAAAUu ||||||| ucuacuaacgucaaAGCUUUAu 2 9 290 311 [ce6:V:5712212-5712233:+] 0.5232 140 7 -7.52 -1.2023 MIMAT0000051 cel-miR-79 178959 F25B4.2 ucGAAACCAUUGGA---UCGAAAUa :| | |||| | ||||||| uuUUCUACUAACGUCAAAGCUUUAu 2 21 287 311 [ce6:V:5712209-5712233:+] 0.5232 147 7 -8.81 -1.2007 MIMAT0004215 cel-miR-253 178959 F25B4.2 ggaAGGGUGUUGCGGAUGAUu |: :::| : :|||||| uaaUUGUGUAUUUUCUACUAa 2 19 277 297 [ce6:V:5712199-5712219:+] 0.5232 130 6 -9.85 -0.1113

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 peli-1; CELE_F25B4.2; F25B4.2 cel-miR-258 105 119 UUUUCCUAAGGAGAGUUUUGG- |||:|||||||| --------ACCUUUCAAAACCG peli-1; CELE_F25B4.2; F25B4.2 cel-miR-264 80 103 -GUAUUGUUGU-UG-GUGGGCGG- |||||| ||: || ||||| || UCAUAACCACGCACACACCC-CCA peli-1; CELE_F25B4.2; F25B4.2 cel-miR-63 176 205 AAAGGUUGAGCGA-----AGUC--ACAGUAU :|||||:|| ||| |||||| --AUCAACUUGCAACUAAUCAACCUGUCAUC peli-1; CELE_F25B4.2; F25B4.2 cel-miR-78 89 127 -CGUGUUUGU---UGGU------------CCGGAGGU- ||||| || |||| ||:|||:| CGCACACACCCCCACCACCUUUCAAAACCGGUCUCUAU peli-1; CELE_F25B4.2; F25B4.2 cel-miR-79 279 313 UCGAAAC-CAUU--GGA-----------UCGAAAUA- ||| ||| :|| |||||||| ---AUUGUGUAUUUUCUACUAACGUCAAAGCUUUAUU peli-1; CELE_F25B4.2; F25B4.2 cel-miR-258 97 117 uuuuccuaaGGAGAGUUUUGG |||:|||||||| cccccaccaCCTTTCAAAACC peli-1; CELE_F25B4.2; F25B4.2 cel-miR-264 81 102 GUAUUGUUGU-UG-GUGGGCGg |||||| ||: || ||||| | CATAACCACGCACACACCCCCa peli-1; CELE_F25B4.2; F25B4.2 cel-miR-63 172 204 aAAG--GUUGAGC---GA--AGU--CACAGUAu ||| |||||:| || ||| |||||| gTTCATCAACTTGCAACTAATCAACCTGTCATc peli-1; CELE_F25B4.2; F25B4.2 cel-miR-78 108 125 cguGUUUGUUGGUCCGGAGGU ||| |||| ||:|||:| tttCAA--AACC-GGTCTCTA peli-1; CELE_F25B4.2; F25B4.2 cel-miR-258 110 117 UUUUCCUAA----------------------GGAGAGUUUUGG |||:|||||||| UCUCAUCAUAACCACGCACACACCCCCACCACCUUUCAAAACCG peli-1; CELE_F25B4.2; F25B4.2 cel-miR-79 304 311 UCGAAACC------------------AUUGGA---UCGAAAUA |||| | |||||||| ACACAAUAUAAUUGUGUAUUUUCUACUAACGUCAAAGCUUUAUU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score peli-1 RAID01172322 cel-miR-66-5p miRNA MIMAT0000038 peli-1 mRNA 178959 Prediction 0.1828 peli-1 RAID02269993 cel-miR-253-3p miRNA MIMAT0004215 peli-1 mRNA 178959 Prediction 0.1828 peli-1 RAID03171446 cel-miR-75-3p miRNA MIMAT0000047 peli-1 mRNA 178959 Prediction 0.2202 peli-1 RAID03185759 cel-miR-79-3p miRNA MIMAT0000051 peli-1 mRNA 178959 Prediction 0.2202