DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000313 cel-miR-258 175946 bath-41 uuuuccuaaggagaGUUUUGg |||||| ucaaauuuuugaaaCAAAACg 2 8 106 126 [ce6:III:6720461-6720481:-] 0.6649 120 6 -7.69 -0.1742 MIMAT0004229 cel-miR-794 175946 bath-41 ucacuguugcuacuAAUGGAGu ||||||: uguuugcugguauuUUACCUUu 2 9 70 91 [ce6:III:6720496-6720517:-] 0.5489 124 0 -9.46 -0.1081 MIMAT0006775 cel-miR-1833 175946 bath-41 cgugugaaUAAAGCGUUCGGAGc ||||: ||||| | aaaauaaaAUUUUUGAAGCCGC- 2 16 213 234 [ce6:III:6720353-6720374:-] 0.6649 123 0 -10.06 -0.4686 MIMAT0006776 cel-miR-1834 175946 bath-41 aaccuAGAGUUACCAACUAGAGa |:||| ||||||||| accuuUUUCAUCAGUUGAUCUCa 2 19 86 108 [ce6:III:6720479-6720501:-] 0.5316 162 7 -16.46 -1.2057 MIMAT0011425 cel-miR-2207 175946 bath-41 gaaUAUGUGU--CAGAGUUAAGUgu | ||| | | :| |||||| uugAAACAAAACGCUUGAAUUCAag 3 21 114 138 [ce6:III:6720449-6720473:-] 0.6649 131 0 -8.68 -0.1245 MIMAT0011432 cel-miR-2209a 175946 bath-41 acaucACAUUGG-CGACUAGAGa | | |:| |:||||||| accuuUUUCAUCAGUUGAUCUCa 2 18 86 108 [ce6:III:6720479-6720501:-] 0.5316 152 7 -14.87 -1.2072 MIMAT0011458 cel-miR-2218b* 175946 bath-41 agagugauguuugauGUUUAAa |||||| uucaucaguugaucuCAAAUUu 2 8 92 113 [ce6:III:6720474-6720495:-] 0.6649 120 6 -8.65 -0.1341 MIMAT0011461 cel-miR-2220* 175946 bath-41 cuAUUUAUCAAAUACCAGAAUg ||| | | | ||||:||| ugUAAUUUUUAUUUGGUUUUAu 2 21 153 174 [ce6:III:6720413-6720434:-] 0.6649 144 0 -9.21 -0.1080 MIMAT0011462 cel-miR-2220 175946 bath-41 gacauucaggUGU-UUGUUAAcu ||| ||||||| uguuuuauaaACACAACAAUUug 3 13 185 207 [ce6:III:6720380-6720402:-] 0.6649 131 0 -9.70 -0.2958 MIMAT0014446 cel-miR-2953-5p 175946 bath-41 uaaAAGUGCUUGUGAAGACAu | :|: |: ||||||| auaUCUAUUCAUCCUUCUGUu 2 19 53 73 [ce6:III:6720514-6720534:-] 0.4910 146 7 -11.71 -0.7670 MIMAT0000021 cel-miR-50 175946 bath-41 ggguucuuauggucuGUAUAGu |||||| uguuugcucuucaauCAUAUCu 2 8 37 58 [ce6:III:6720529-6720550:-] 0.5836 120 6 -10.10 -0.1272 MIMAT0000030 cel-miR-58 175946 bath-41 uaacggcaugacuuGCUAGAGu :|||||| ccuuuuucaucaguUGAUCUCa 2 9 87 108 [ce6:III:6720479-6720500:-] 0.5316 124 6 -11.25 -0.1994 MIMAT0000034 cel-miR-62 175946 bath-41 gacauucgaucuaauGUAUAGu |||||| uguuugcucuucaauCAUAUCu 2 8 37 58 [ce6:III:6720529-6720550:-] 0.5836 120 6 -11.21 -0.1235 MIMAT0000053 cel-miR-80 175946 bath-41 agccGAAAGUUGAUUACUAGAGu :||||| | : ||||||| accuUUUUCAUCAGUUGAUCUCa 2 20 86 108 [ce6:III:6720479-6720501:-] 0.5316 163 7 -17.14 -1.2025 MIMAT0000054 cel-miR-81 175946 bath-41 ugaucGAAAGUG--CUACUAGAGu :|||||: | ||||||| uaccuUUUUCAUCAGUUGAUCUCa 2 18 85 108 [ce6:III:6720479-6720502:-] 0.5316 156 7 -16.67 -1.2009 MIMAT0000055 cel-miR-82 175946 bath-41 ugaccGAAAGUG--CUACUAGAGu :|||||: | ||||||| uaccuUUUUCAUCAGUUGAUCUCa 2 18 85 108 [ce6:III:6720479-6720502:-] 0.5316 156 7 -16.67 -1.2009 MIMAT0000061 cel-miR-90 175946 bath-41 uccccguaaguuuguuGUAUAGu |||||| guguuugcucuucaauCAUAUCu 2 8 36 58 [ce6:III:6720529-6720551:-] 0.5836 120 6 -10.20 -0.1199 MIMAT0000310 cel-miR-254 175946 bath-41 ggaugucagcgcuuuCUAAACGu ||||||: ugguuuuauugauuuGAUUUGUu 2 9 166 188 [ce6:III:6720399-6720421:-] 0.6649 124 0 -8.67 -0.4539 MIMAT0000697 cel-miR-355 175946 bath-41 guaUCGAGUCCGAUUUUGUUu | :| | ||||||:|| acaAUUUGAUUCUAAAAUAAa 2 19 200 220 [ce6:III:6720367-6720387:-] 0.6649 138 0 -8.47 -0.1196 MIMAT0000697 cel-miR-355 175946 bath-41 guaucgaguccGAUUUUGUUu :|:|||||| aucucaaauuuUUGAAACAAa 2 11 103 123 [ce6:III:6720464-6720484:-] 0.6649 130 6 -11.84 -0.3648 MIMAT0004223 cel-miR-788 175946 bath-41 gacgUUUACCUU-CAAUCUUCGCCu |||| || || ||||| | ucuaAAAUAAAAUUUUUGAAGCCGc 2 21 210 234 [ce6:III:6720353-6720377:-] 0.6649 127 0 -4.99 -0.4753

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score bath-41 RAID00253987 cel-miR-82-3p miRNA MIMAT0000055 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID00342719 cel-miR-58a-3p miRNA MIMAT0000030 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID00904226 cel-miR-50-5p miRNA MIMAT0000021 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID02234996 cel-miR-788-5p miRNA MIMAT0004223 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID02653083 cel-miR-62 miRNA MIMAT0000034 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID02972787 cel-miR-355-5p miRNA MIMAT0000697 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID03261025 cel-miR-90-3p miRNA MIMAT0000061 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID03721283 cel-miR-80-3p miRNA MIMAT0000053 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID04016843 cel-miR-254-3p miRNA MIMAT0000310 bath-41 mRNA 175946 Prediction 0.1828 bath-41 RAID04028306 cel-miR-81-3p miRNA MIMAT0000054 bath-41 mRNA 175946 Prediction 0.1828