hda-6
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0015099cel-miR-51*177316F41H10.6acguGGACAUG-GACGA-AGGUAc :|||| : |||| ||||| ucucUCUGUUUGGUGCUAUCCAUg219555578[ce6:IV:5356686-5356709:-]0.63251210-19.35-0.6235
MIMAT0000324cel-miR-268177316F41H10.6ugguuugacgaagAUUAAGAACGg || ||:|||| uuugucaaauaaaUACUUUUUGCa2123457[ce6:IV:5356544-5356567:-]0.63251310-9.71-0.1101
MIMAT0005031cel-miR-1018177316F41H10.6gacauucagguuACUAGAGAGa ||||||||| ucuuucaauggcUGAUCUCUCu211540561[ce6:IV:5356703-5356724:-]0.63251507-17.22-0.5654
MIMAT0005031cel-miR-1018177316F41H10.6gacauucagguuacUAGAGAGa ||||||| cgcaaugaugcaccAUCUCUCa29501522[ce6:IV:5356742-5356763:-]0.63251407-13.33-0.5681
MIMAT0005522cel-miR-1021177316F41H10.6ggCUCCUAAAGUGUACUAGAGUGAa || | | || || ||||||| caGAAGUGUGGACUUG-UCUCACUu224440463[ce6:IV:5357132-5357155:-]0.63021537-15.34-0.5253
MIMAT0006587cel-miR-1820177316F41H10.6cuuguAGUAGCUUUU---UGU-UAGUUUu || |:|| || ||| |||||| uaaauUCUUUGACAAUUCACAUAUCAAAu2216593[ce6:IV:5357502-5357530:-]0.40441276-7.24-0.8192
MIMAT0006591cel-miR-1824177316F41H10.6uucaacccccucUUUGUGACGGu |: ||||||| ugaaagaaguuaAGCCACUGCCg212368390[ce6:IV:5357205-5357227:-]0.63021437-16.33-0.3298
MIMAT0006776cel-miR-1834177316F41H10.6aaccuAGAGUUACCAACUAGAGa |:||||||| ||||||| ggcucUUUCAAUGGCUGAUCUCu219537559[ce6:IV:5356705-5356727:-]0.63251787-25.67-0.4147
MIMAT0011425cel-miR-2207177316F41H10.6gaaUAUGUGUCAGA--GUUAAGUGu ||| |: |:| |||||||| auaAUAAAUUCUUUGACAAUUCACa2216185[ce6:IV:5357510-5357534:-]0.40441557-12.52-0.8772
MIMAT0011427cel-miR-2208a177316F41H10.6ccuauagucuaagcccAUGUGAa |||||| auacuuuuugcauaaaUACACUu284668[ce6:IV:5356533-5356555:-]0.63251206-7.03-0.2976
MIMAT0011429cel-miR-2208b-5p177316F41H10.6ccuauagucuaggcccAUGUGAa |||||| auacuuuuugcauaaaUACACUu284668[ce6:IV:5356533-5356555:-]0.63251206-9.61-0.2976
MIMAT0011431cel-miR-2209a*177316F41H10.6cuuccucuucucaccaAUGUGAg |||||| auacuuuuugcauaaaUACACUu284668[ce6:IV:5356533-5356555:-]0.63251206-6.75-0.2951
MIMAT0011432cel-miR-2209a177316F41H10.6acaucacaUUGGCGACUAGAGa ||: ||||||||| gcucuuucAAUGGCUGAUCUCu215538559[ce6:IV:5356705-5356726:-]0.63251587-19.14-0.4274
MIMAT0011433cel-miR-2209c*177316F41H10.6uuuguucugcacgccaAUGUGAg |||||| auacuuuuugcauaaaUACACUu284668[ce6:IV:5356533-5356555:-]0.63251206-7.42-0.2976
MIMAT0011434cel-miR-2209c177316F41H10.6acaucacauuggccacCAGAAAa |||||| auuguuguuuauuuucGUCUUUg281537[ce6:IV:5356564-5356586:-]0.63251206-5.87-0.1699
MIMAT0011444cel-miR-2214177316F41H10.6uugcggccaguucaacaACAGUUAc ||||||| -----------acaacgUGUCAAUu29114[ce6:IV:5356587-5356600:-]0.63251407-8.22-1.0880
MIMAT0011444cel-miR-2214177316F41H10.6uugcggccaguuCAACAACAGUUac || ||||||| uuguuuauuuucGUCUUUGUCAAau3141943[ce6:IV:5356558-5356582:-]0.63251290-8.23-0.1815
MIMAT0011444cel-miR-2214177316F41H10.6uugcggccaguucaacaACAGUUAc ||||||| ugccuuccuaaacaacgUGUCAAUu29653677[ce6:IV:5356587-5356611:-]0.63251407-10.60-0.9108
MIMAT0011444cel-miR-2214177316F41H10.6uugcggccaguuCAACAACAGUUac || ||||||| uuguuuauuuucGUCUUUGUCAAau314682706[ce6:IV:5356558-5356582:-]0.63251290-8.23-0.1238
MIMAT0011446cel-miR-2215177316F41H10.6uuugUUGUGCGC-GAUGCUAAGa |:| : || | ||||||| acgaAGCCUACGACGACGAUUCa219218240[ce6:IV:5357355-5357377:-]0.56781497-16.44-0.3787
MIMAT0011447cel-miR-2216177316F41H10.6cgGAUGGCUGAAUUUUACACg :|| | | | |||||||| guUUAACAAAUAAAAAUGUGg2201232[ce6:IV:5357563-5357583:-]0.28471597-9.34-0.2518
MIMAT0011451cel-miR-2217*177316F41H10.6cuagcUGUGGCUGACG-GGU-GAGAc :|| :|| ||| ||| |||| aacacGCAAUGA-UGCACCAUCUCUc220497521[ce6:IV:5356743-5356767:-]0.63251200-18.88-0.6994
MIMAT0011454cel-miR-2209b177316F41H10.6acUUCGUGUUGGCG---AGUAGAGa | |||| |:| | ||||||| ugAUGCACCAUCUCUCAUCAUCUCa221506530[ce6:IV:5356734-5356758:-]0.63251557-22.65-1.0521
MIMAT0011454cel-miR-2209b177316F41H10.6acuUCGU-GUUG-GCGAGUAGAGa | || |||| || |||||| aucAUCAUCAACUCGACCAUCUCa220279302[ce6:IV:5357293-5357316:-]0.63021296-17.84-0.1765
MIMAT0000005cel-miR-34177316F41H10.6guuggUCGAUUGGUGUGACGGa ||:||| | ||||||| aaagaAGUUAAGC-CACUGCCg218370390[ce6:IV:5357205-5357225:-]0.63021597-20.77-0.2989
MIMAT0000020cel-miR-49177316F41H10.6agACGUCGA-AGA-GCACCACGAa || | || ||| : ||||||| gcUG-AUCUCUCUGUUUGGUGCUa221550572[ce6:IV:5356692-5356714:-]0.63251487-19.05-1.1614
MIMAT0000021cel-miR-50177316F41H10.6ggGUUCUUAUGGUCUGUAUAGu ::| ||| | ||||||| uuUGACAAUUC---ACAUAUCa2217290[ce6:IV:5357505-5357523:-]0.31991447-9.02-0.7194
MIMAT0000032cel-miR-60177316F41H10.6acUUGAUCUUU--UACACGUAUUau || || | | | ||||||| ucAAAUAAAUACUUUUUGCAUAAau3223862[ce6:IV:5356539-5356563:-]0.63251320-5.13-0.1253
MIMAT0000034cel-miR-62177316F41H10.6gacauucgaucUAA-UGUAUAGu ||| ||||||| auucuuugacaAUUCACAUAUCa2126890[ce6:IV:5357505-5357527:-]0.40441467-9.07-0.9213
MIMAT0000035cel-miR-63177316F41H10.6aaagguugagcgaaguCACAGUau |||||| -----------acaacGUGUCAau39113[ce6:IV:5356588-5356600:-]0.63251200-8.84-0.2049
MIMAT0000035cel-miR-63177316F41H10.6aaagguugagcgaaguCACAGUau |||||| ugccuuccuaaacaacGUGUCAau39653676[ce6:IV:5356588-5356611:-]0.63251200-10.96-0.1208
MIMAT0000036cel-miR-64177316F41H10.6aagccauugcgaaguCACAGUau |||||| ----------acaacGUGUCAau39113[ce6:IV:5356588-5356600:-]0.63251200-8.98-0.2012
MIMAT0000036cel-miR-64177316F41H10.6aagccauugcgaaguCACAGUau |||||| gccuuccuaaacaacGUGUCAau39654676[ce6:IV:5356588-5356610:-]0.63251200-8.98-0.1184
MIMAT0000037cel-miR-65177316F41H10.6aagccaaugcgaaguCACAGUau |||||| ----------acaacGUGUCAau39113[ce6:IV:5356588-5356600:-]0.63251200-8.98-0.2012
MIMAT0000037cel-miR-65177316F41H10.6aagccaaugcgaaguCACAGUau |||||| gccuuccuaaacaacGUGUCAau39654676[ce6:IV:5356588-5356610:-]0.63251200-8.98-0.1184
MIMAT0000038cel-miR-66177316F41H10.6aguguagggauuaguCACAGUac |||||| ----------acaacGUGUCAau39113[ce6:IV:5356588-5356600:-]0.63251200-7.79-0.2012
MIMAT0000038cel-miR-66177316F41H10.6agUGUAGGGAUUAGU--CACAGUac :| |:||||| || |||||| auGCCUUCCUAAACAACGUGUCAau322652676[ce6:IV:5356588-5356612:-]0.63251480-16.08-0.1173
MIMAT0000043cel-miR-71177316F41H10.6aguGAUGGGUACAGAAAgu :||::: |||||| uguUUAUUUUCGUCUUUgu3172038[ce6:IV:5356563-5356581:-]0.63251280-7.96-0.1254
MIMAT0000053cel-miR-80177316F41H10.6agccGAAAGUUGAUUACUAGAGu |||||||: : ||||||| ggcuCUUUCAAUGGCUGAUCUCu220537559[ce6:IV:5356705-5356727:-]0.63251717-19.70-0.4147
MIMAT0000054cel-miR-81177316F41H10.6ugaucGAAAG-UGCU-ACUAGAGu ||||| |:|: ||||||| uggcuCUUUCAAUGGCUGAUCUCu218536559[ce6:IV:5356705-5356728:-]0.63251597-19.49-0.4242
MIMAT0000055cel-miR-82177316F41H10.6ugACC--GAAAG-UGCU-ACUAGAGu ||| ||||| |:|: ||||||| aaUGGCUCUUUCAAUGGCUGAUCUCu221534559[ce6:IV:5356705-5356730:-]0.63251617-22.30-0.4242
MIMAT0000056cel-miR-83177316F41H10.6aaUGACU---UAAAUAUACCACGAu :|||| | |:| ||||||| ugGCUGAUCUCUCUGUUUGGUGCUa221548572[ce6:IV:5356692-5356716:-]0.63251517-18.61-1.1652
MIMAT0000058cel-miR-85177316F41H10.6cgugcugaaaaguuuauGAAACAu |||||| uuguuguuuauuuucguCUUUGUc28679702[ce6:IV:5356562-5356585:-]0.63251206-10.41-0.2353
MIMAT0000061cel-miR-90177316F41H10.6uccccguaaGUUUGUUGUAUAGu ||| : ||||||| auucuuugaCAAUUCACAUAUCa2156890[ce6:IV:5357505-5357527:-]0.40441507-12.17-0.9148
MIMAT0000284cel-miR-229177316F41H10.6gcuaccuuuucUAUUGGUCACAGUaa | ||| |||||| -----------ACAAC--GUGUCAau316113[ce6:IV:5356588-5356600:-]0.63251240-7.66-0.1907
MIMAT0000284cel-miR-229177316F41H10.6gcuaccuuuucuAUUGGU--CACAGUaa ||| || |||||| acaaugccuuccUAAACAACGUGUCAau315649676[ce6:IV:5356588-5356615:-]0.63251290-9.36-0.1173
MIMAT0000304cel-miR-248177316F41H10.6acucgcaauaggcacgUGCACAua |||||| -------------acaACGUGUca39111[ce6:IV:5356590-5356600:-]0.63251200-9.53-0.2966
MIMAT0000304cel-miR-248177316F41H10.6acucgcaauaggcacgUGCACAua |||||| aaugccuuccuaaacaACGUGUca39651674[ce6:IV:5356590-5356613:-]0.63251200-11.40-0.2981
MIMAT0000307cel-miR-251177316F41H10.6uuauucucgccGUGGUGAUGAAUu :|| :|||||| uuuugcauaaaUACACUUACUUAu2145174[ce6:IV:5356527-5356550:-]0.63251296-9.22-0.1413
MIMAT0000308cel-miR-252177316F41H10.6aauggacgccGUGAUGAUGAAUa :|| :|||||| uuugcauaaaUACACUUACUUAu2145274[ce6:IV:5356527-5356549:-]0.63251296-11.25-0.1413
MIMAT0004225cel-miR-790177316F41H10.6gcgccACAAGCGCUCACGGUUc || || |||||||||| cagcuUGCUC-CGAGUGCCAAa218413433[ce6:IV:5357162-5357182:-]0.63021637-21.40-0.6167
MIMAT0004226cel-miR-791177316F41H10.6acgGAAUAGACGCCUCACGGUUu |||: || | ||||||||| cagCUUG-CU-CCGAGUGCCAAa221413433[ce6:IV:5357162-5357182:-]0.63021607-23.49-0.6241
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
hda-6; F41H10.6cel-miR-124409432ACC-GUAA---GUGGCGCACGGAAU || || | ||| |||||CGGACAGCUUGCUCCGAGUGCCA--
hda-6; F41H10.6cel-miR-233327348-GG-CGUGUACGCGUAACGAGUU || ||||| || |:|||:||ACCAGCACACGC-CGUUGUUCC-
hda-6; F41H10.6cel-miR-239a597619-GGUCAUGGAUACACAUCAUGUUU- |||| ||:||| :||:||||UCCAGCACUUAUC---GGUGCAAAA
hda-6; F41H10.6cel-miR-242211235-AGCUUC-GUUUCCGGAUGC-GUU- |||| | |:|| ||||||| |:|AUCGACGACGAA-GCCUACGACGAC
hda-6; F41H10.6cel-miR-245316333CUCGAUGAACCUC--CCCUGGUUA |||| |||||||:-------AUGGAUUCGGGACCAGC
hda-6; F41H10.6cel-miR-248336362ACUC-GCAAUAGGC---ACG-UGCACAUA | ||||:|:| ||| ||||||--CGCCGUUGUUCCACUUGCCACGUGUC-
hda-6; F41H10.6cel-miR-249619649CCGUUG-CGAGU--UUUC----AGGACACU- ||:| ||||| |:|| |:| ||||-UCAGCAGCUCACGAGAGCAAAUUCGGUGAA
hda-6; F41H10.6cel-miR-264379398GUAUUGUUGUUGGUGGGCGG- |:| || :||:|| |||--AAGCCACUGCCGCCAGCCA
hda-6; F41H10.6cel-miR-270381398GAGGUGACGAUGUAGUACGG- ||||||| :| || |||-GCCACUGCCGC--CA-GCCA
hda-6; F41H10.6cel-miR-34325356GUUGGUCGAU--UGGU------GUG-ACGGA :|||||| :||: ||| ||||GGACCAGCACACGCCGUUGUUCCACUUGCCA
hda-6; F41H10.6cel-miR-356111133ACUA--AACAAGCGCAACGAGUU |:| |||| | |||||:|||GGGUAAUUGUCC-CGUUGUUCAU
hda-6; F41H10.6cel-miR-392618649-AGUA---GUGUGCACU------AGCUACUAU ||| | |||| || |||:|||AUCAGCAGCUCACGAGAGCAAAUUCGGUGAA-
hda-6; F41H10.6cel-miR-42558583-AGACAU-CUACAAUUGGGCCACU- ||||| |:|| || || ||||CUCUGUUUGGUGCUAUCCAUGUGAU
hda-6; F41H10.6cel-miR-49548573AGACGUCGA----AGAGC---ACCACGAA :||| |||| |||||||----UGGCUGAUCUCUCUGUUUGGUGCUA
hda-6; F41H10.6cel-miR-54306328-GAGCC-UAAUACUUCUAAUGCCCAU ||:| |||||| |||| ||||UCUUGAAAUUAUG--GAUU-CGGGA-
hda-6; F41H10.6cel-miR-59295327-GUAG-----UAGGACUAU--UUGCUAAGCU- |||| |||:||| | ||||||:CCAUCUCAUAAUCUUGAAAUUAUGGAUUCGGG
hda-6; F41H10.6cel-miR-63412433AAAGGUUGAGCGAAG-UCACAGUAU ||:||:||| | |||| ||---ACAGCUUGCUCCGAGUGCCAA-
hda-6; F41H10.6cel-miR-64639676-AAGCCAU-----UGCG-AAGU--------CACAGUAU ||||||: |:|| ||| ||||||AUUCGGUGAAACAAUGCCUUCCUAAACAACGUGUCAA-
hda-6; F41H10.6cel-miR-65639676-AAGCCA-------AUGCGAAGU--------CACAGUAU |||||| |:| |||| ||||||AUUCGGUGAAACAAUGC-CUUCCUAAACAACGUGUCAA-
hda-6; F41H10.6cel-miR-66653676AGUGUAGGGAUUAGU--CACAGUAC :| |:||||| || ||||||-UGCCUUCCUAAACAACGUGUCAA-
hda-6; F41H10.6cel-miR-74324357ACAUCUGA-------CGGUAAA-----GAACGGU- :||| |||:|| |||||||--GGGACCAGCACACGCCGUUGUUCCACUUGCCAC
hda-6; F41H10.6cel-miR-75107153-ACUUC---------GGC-------------CAACCAUCGAAAUU |||:| ||| |||| |:|||||||UUGAGGGUAAUUGUCCCGUUGUUCAUUAUCUGUUGUUGGCUUUAAC
hda-6; F41H10.6cel-miR-76197224-AGUUCC-GAA--GUAGUUGUUGCUU- |:| || || :|||:||:|||||AUUACGGACUCGAUAUCGACGACGAAG
hda-6; F41H10.6cel-miR-788426453GAC-GUUUACCUUCAAUCUUCG--CCU- || ||||| | | |||||: |||GUGCCAAAUUGGGGC-AGAAGUGUGGAC
hda-6; F41H10.6cel-miR-790414434GCGCCACAAGCGCUCACGGUUC || || || ||||||||||AGCU-UGCUC-CGAGUGCCAAA
hda-6; F41H10.6cel-miR-791414435ACGGAAUAGACGCCUCACGGUUU- ||:| || | ||||||||||AGCUUG--CU-CCGAGUGCCAAAU
hda-6; F41H10.6cel-miR-80535560AGCCGA--AAGUUGAUUACUAGAGU :|||| |||||: |||||||AUGGCUCUUUCAAUGGCUGAUCUCU
hda-6; F41H10.6cel-miR-800408429GCCGUCUGUU-AA--AGGCUCAAAC |:||||: || |||||||--UCGGACAGCUUGCUCCGAGUG--
hda-6; F41H10.6cel-miR-81535560UGAUCGA--AAG-UGCU-ACUAGAGU |:||| ||| |:|: |||||||-AUGGCUCUUUCAAUGGCUGAUCUCU
hda-6; F41H10.6cel-miR-82535560UGACCGA--AAG-UGCU-ACUAGAGU ||||| ||| |:|: |||||||-AUGGCUCUUUCAAUGGCUGAUCUCU
hda-6; F41H10.6cel-miR-83549574AAUGACUUAA---AUAUACCACGAU- :|||| |:| ||||||||-GGCUGAUCUCUCUGUUUGGUGCUAU
hda-6; F41H10.6cel-miR-124413433acCGUAAGUGGCGCACGGaau || | | ||| |||||caGCTTGCTCCGAGTGCCaaa
hda-6; F41H10.6cel-miR-233328348GG-CGUGUACGCGUAACGAGuu|| ||||| || |:|||:||CCAGCACACGC-CGTTGTTCca
hda-6; F41H10.6cel-miR-239a598617GGUCAUGGAUACACAUCAUGUUU|||| ||:||| :||:||||CCAGCACTTAT---CGGTGCAAA
hda-6; F41H10.6cel-miR-242212232AGCUUC-GUUUCCGGAUGCguu|||| | |:|| |||||||TCGACGACGAA-GCCTACGacg
hda-6; F41H10.6cel-miR-245309332cucgaugaACCU--CCCCUGGUua |||| |||||||tgaaattaTGGATTCGGGACCAgc
hda-6; F41H10.6cel-miR-248335362acucGCAAUA--G-GCAC-GUGCACAua ||||:| | | || |||||||acgcCGTTGTTCCACTTGCCACGTGTcc
hda-6; F41H10.6cel-miR-249621647cCGUUGCGAGUUUUC----AGGACACU |||:| | |:|:|| |:| ||||aGCAGCTCACGAGAGCAAATTCGGTGA
hda-6; F41H10.6cel-miR-264371392guauuguugUUGGUG--GGCGG |:|||| |||||aagaagttaAGCCACTGCCGCC
hda-6; F41H10.6cel-miR-270380408gaGGUGACGAUG--------UAG-UACGg ||||||| :| ||| ||||agCCACTGCCGCCAGCCAAAATCAATGCt
hda-6; F41H10.6cel-miR-34370390gUUGGUCGAUUGGUGUGACGGa || ||:||| | |||||||aAAGAAGTTAAGC-CACTGCCg
hda-6; F41H10.6cel-miR-356113132acUAAACAAGCGCAACGAGUu | ||| || |||||:|||gtAATTG-TCCCGTTGTTCAt
hda-6; F41H10.6cel-miR-392622649aGUAGUGUGCACU------AGCUACUau || | |||| || |||:|||gCAGCTCACGAGAGCAAATTCGGTGAaa
hda-6; F41H10.6cel-miR-42559581AGAC-AUCUACAAUUGGGCCACU|||| | |:|| || || ||||TCTGTTTGGTGCTATCCATGTGA
hda-6; F41H10.6cel-miR-49547572agaCGUCGA-AGAG-C--ACCACGAa || | | |||| | |||||||atgGCTGATCTCTCTGTTTGGTGCTa
hda-6; F41H10.6cel-miR-54307328GAGC-CUAAUACUUCUAAUGCCCau||:| |||||| || | ||||CTTGAAATTATG--GA-TTCGGGac
hda-6; F41H10.6cel-miR-59301325GUAGUAGGAC--UAUUUGCUAAGCu||| |||:|| || | ||||||CATAATCTTGAAATTATGGATTCGg
hda-6; F41H10.6cel-miR-63409433aaagGUUGAGCGAAG-UCACAGUau ||:||:||| | |||| ||cggaCAGCTTGCTCCGAGTGCCAaa
hda-6; F41H10.6cel-miR-64640676AAGCCA-----UUGC-GAAG-------U-CACAGUau|||||| ||:| |||| | ||||||TTCGGTGAAACAATGCCTTCCTAAACAACGTGTCAat
hda-6; F41H10.6cel-miR-65640676AAGCCA-----AUGC-GAAG-------U-CACAGUau|||||| |:| |||| | ||||||TTCGGTGAAACAATGCCTTCCTAAACAACGTGTCAat
hda-6; F41H10.6cel-miR-66652676aguGUAGGGAUUAGU--CACAGUac | |:||||| || ||||||atgCCTTCCTAAACAACGTGTCAat
hda-6; F41H10.6cel-miR-74330355aCAUCUGACGGUAA-----AGAACGGU | | || |||:|| |||||||aGCACAC-GCCGTTGTTCCACTTGCCA
hda-6; F41H10.6cel-miR-75130151acuucgGCCAACCAUCGAAAUU | |||| |:|||||||cattatCTGTTGTTGGCTTTAA
hda-6; F41H10.6cel-miR-76198222AGUUCCGAAG---UAGUUGUUGCUU|:| || || |||:||:|||||TTACGGACTCGATATCGACGACGAA
hda-6; F41H10.6cel-miR-790407433GCGCC------ACAAGCGCUCACGGUUc| ||| || || ||||||||||CTCGGACAGCTTGCTC-CGAGTGCCAAa
hda-6; F41H10.6cel-miR-791413433acgGAAUAGACGCCUCACGGUUU |||: || | ||||||||||cagCTTG-CT-CCGAGTGCCAAA
hda-6; F41H10.6cel-miR-80535559agCC--GAAAGUUGAUUACUAGAGu || |||||||: : |||||||atGGCTCTTTCAATGGCTGATCTCt
hda-6; F41H10.6cel-miR-800406430gccGUCUGUU-AA--AGGCUCAaac |:||||: || |||||||gctCGGACAGCTTGCTCCGAGTgcc
hda-6; F41H10.6cel-miR-81534559UGAUC--GAAAGU--GCUACUAGAGu| |:| |||||| | |||||||AATGGCTCTTTCAATGGCTGATCTCt
hda-6; F41H10.6cel-miR-82534559UGACC--GAAAGU--GCUACUAGAGu| ||| |||||| | |||||||AATGGCTCTTTCAATGGCTGATCTCt
hda-6; F41H10.6cel-miR-83548572AAUGACU---UAAAUAUACCACGAU| :|||| | |:| ||||||||TGGCTGATCTCTCTGTTTGGTGCTA
hda-6; F41H10.6cel-miR-34383390GUUGG----------------------UCGAUUGGUGUGACGGA ||:||| | |||||||ACUUGCCACGUGUCCACAUUUGAAAGAAGUUAAGC-CACUGCCG
hda-6; F41H10.6cel-miR-49565572--------------AGACGUCGA----AGAGC---ACCACGAA || ::||| |||| |||||||AUCCAAUGGCUCUUUCAAUGGCUGAUCUCUCUGUUUGGUGCUA
hda-6; F41H10.6cel-miR-790426433GC----------------GCC------ACAAGCGCUCACGGUUC ||| || || ||||||||||CCAGCCAAAAUCAAUGCUCGGACAGCUUGCUC-CGAGUGCCAAA
hda-6; F41H10.6cel-miR-791426433A-----------------------CGGAAUAGACGCCUCACGGUUU ||:| || | ||||||||||CCAGCCAAAAUCAAUGCUCGGACAGCUUG--CU-CCGAGUGCCAAAU
hda-6; F41H10.6cel-miR-80552559A------------------GCCGA--AAGUUGAUUACUAGAGU :|||| |||||: |||||||CUCUCAUCAUCUCAUCCAAUGGCUCUUUCAAUGGCUGAUCUCU
hda-6; F41H10.6cel-miR-81552559UG-----------------AUCGA--AAGU-GCU-ACUAGAGU |:||| |||| :|: |||||||CUCUCAUCAUCUCAUCCAAUGGCUCUUUCAAUGGCUGAUCUCU
hda-6; F41H10.6cel-miR-82552559UG-----------------ACCGA--AAGU-GCU-ACUAGAGU ||||| |||| :|: |||||||CUCUCAUCAUCUCAUCCAAUGGCUCUUUCAAUGGCUGAUCUCU
hda-6; F41H10.6cel-miR-83565572AA------------------UGACUUAA---AUAUACCACGAU :|||| |:| ||||||||AUCCAAUGGCUCUUUCAAUGGCUGAUCUCUCUGUUUGGUGCUAU
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
hda-6RAID00115272cel-miR-60-3pmiRNAMIMAT0000032hda-6mRNA177316Prediction0.1828
hda-6RAID00261964cel-miR-82-3pmiRNAMIMAT0000055hda-6mRNA177316Prediction0.1828
hda-6RAID00332465cel-miR-65-5pmiRNAMIMAT0000037hda-6mRNA177316Prediction0.1828
hda-6RAID00415964cel-miR-251miRNAMIMAT0000307hda-6mRNA177316Prediction0.1828
hda-6RAID00831975cel-miR-50-5pmiRNAMIMAT0000021hda-6mRNA177316Prediction0.1828
hda-6RAID01077838cel-miR-49-3pmiRNAMIMAT0000020hda-6mRNA177316Prediction0.2202
hda-6RAID01119086cel-miR-34-5pmiRNAMIMAT0000005hda-6mRNA177316Prediction0.1828
hda-6RAID01129128cel-miR-252-5pmiRNAMIMAT0000308hda-6mRNA177316Prediction0.1828
hda-6RAID01144386cel-miR-81-3pmiRNAMIMAT0000054hda-6mRNA177316Prediction0.1828
hda-6RAID01193598cel-miR-64-5pmiRNAMIMAT0000036hda-6mRNA177316Prediction0.1828
hda-6RAID01302335cel-miR-90-3pmiRNAMIMAT0000061hda-6mRNA177316Prediction0.1828
hda-6RAID01574853cel-miR-62miRNAMIMAT0000034hda-6mRNA177316Prediction0.1828
hda-6RAID01648200cel-miR-63-3pmiRNAMIMAT0000035hda-6mRNA177316Prediction0.1828
hda-6RAID01839913cel-miR-85-3pmiRNAMIMAT0000058hda-6mRNA177316Prediction0.1828
hda-6RAID01876168cel-miR-71-5pmiRNAMIMAT0000043hda-6mRNA177316Prediction0.1828
hda-6RAID01977929cel-miR-80-3pmiRNAMIMAT0000053hda-6mRNA177316Prediction0.1828
hda-6RAID02327772cel-miR-791-3pmiRNAMIMAT0004226hda-6mRNA177316Prediction0.1828
hda-6RAID02353922cel-miR-229-5pmiRNAMIMAT0000284hda-6mRNA177316Prediction0.1828
hda-6RAID03509110cel-miR-83-3pmiRNAMIMAT0000056hda-6mRNA177316Prediction0.2202
hda-6RAID03547504cel-miR-66-5pmiRNAMIMAT0000038hda-6mRNA177316Prediction0.1828
hda-6RAID03577627cel-miR-790-5pmiRNAMIMAT0004225hda-6mRNA177316Prediction0.1828
hda-6RAID04015682cel-miR-248miRNAMIMAT0000304hda-6mRNA177316Prediction0.1828