prp-17
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0015099cel-miR-51*172999prp-17acGUGGACAUGGACGAAGGUac :|::||| ::| |||||| uuUAUUUGUUUUUUCUUCCAau321178199[ce6:I:10940428-10940449:+]0.47171440-15.62-0.1834
MIMAT0004235cel-miR-800172999prp-17gccgucuguuAAAG-GCUCAAAc | || ||||||| uggcucuuuuUCUCACGAGUUUu2135375[ce6:I:10940303-10940325:+]0.47171437-15.35-0.7743
MIMAT0005031cel-miR-1018172999prp-17gacauucagguuacUAGAGAGa ||||||| cgaguuuuugucccAUCUCUCa296889[ce6:I:10940318-10940339:+]0.47171407-14.86-0.7395
MIMAT0006584cel-miR-1817172999prp-17guacuaucucuucuguAACCGAu |||||| auuauuuucccaaauuUUGGCUc283658[ce6:I:10940286-10940308:+]0.47171206-6.12-0.1335
MIMAT0006768cel-miR-1828172999prp-17ugAUAGUGAAUUUACGAAGGUca |||: || | |||||| uuUAUUUGUU-UUUUCUUCCAau322178199[ce6:I:10940428-10940449:+]0.47171270-9.77-0.1869
MIMAT0004216cel-miR-255172999prp-17gacauuUUUUAGAGAAGUCAAa :|||| ||||||| uagccuGAAAU---UUCAGUUu217264282[ce6:I:10940514-10940532:+]0.47171447-10.03-1.0586
MIMAT0004227cel-miR-792172999prp-17agacuuucaacuucucUAAAGUu |||||| uauuuuuuagccugaaAUUUCAg28257279[ce6:I:10940507-10940529:+]0.47171206-8.12-0.1077
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
prp-17; CELE_F49D11.1; F49D11.1cel-miR-2314976-AAGACGGACAACU--AGUGCUCGAAU ||:|| || |||||||:||AUUUUGGCUCUUUUUCUCACGAGUUUU
prp-17; CELE_F49D11.1; F49D11.1cel-miR-353226245UUAUGGUUGUGUACCGUUAAC- ||:||||| || |||||---UCCGACACACGGAAAUUGA
prp-17; CELE_F49D11.1; F49D11.1cel-miR-8005376GCCGUCUGUUAAAG---GCUCAAAC ||| | |||| |||||||UGGCU--CUUUUUCUCACGAGUUUU
prp-17; CELE_F49D11.1; F49D11.1cel-miR-2315175AAGACG-GACAACUAGUGCUCGAAu||: || || || |||||||:||TTTGGCTCTTTTTCTCACGAGTTTt
prp-17; CELE_F49D11.1; F49D11.1cel-miR-353223243UUAUGGUUGUGUACCGUUAAC| | ||:||||| || |||||ATTTCCGACACACGGAAATTG
prp-17; CELE_F49D11.1; F49D11.1cel-miR-8005375gCCGUCUGUUAAAG---GCUCAAAc ||| | |||| |||||||tGGC--TCTTTTTCTCACGAGTTTt
prp-17; CELE_F49D11.1; F49D11.1cel-miR-8006875--------------------GCCGUCUGUUAAAG---GCUCAAAC :||| | |||| |||||||AUUAUUAUUUUCCCAAAUUUUGGCU--CUUUUUCUCACGAGUUUU
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
prp-17RAID01347817cel-miR-792-3pmiRNAMIMAT0004227prp-17mRNA172999Prediction0.1828
prp-17RAID01354744cel-miR-255-3pmiRNAMIMAT0004216prp-17mRNA172999Prediction0.1828