npl-4.2
DNA & RNA Element - circBase
circRNA IDChromStartEndStrand
cel_circ_0000229chrII56245405632925+
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0015094cel-miR-37*3565577npl-4.2cguGGCGUUGCCUGUGGGUGu |:|:|| | ||||||| gcuCUGUAA-AGUCACCCACa219108127[ce6:II:5624797-5624816:+]0.50001527-23.95-1.0831
MIMAT0015115cel-miR-239b*3565577npl-4.2aaAAACGUGUGGUGUUUUCAcg || ||: :|| |||||| aaUUAUCAUCUCA-AAAAGUau321222[ce6:II:5624691-5624711:+]0.56181340-7.98-0.1283
MIMAT0015115cel-miR-239b*3565577npl-4.2aaAAACGUGUGGUGUUUUCAcg || ||: :|| |||||| aaUUAUCAUCUCA-AAAAGUau321222[ce6:II:5624691-5624711:+]0.56181340-7.98-0.1528
MIMAT0000313cel-miR-2583565577npl-4.2uuuuccuaAGGAGAGUUUUgg || |||||||| --aaauuaUCAUCUCAAAAag314119[ce6:II:5624690-5624708:+]0.56181370-9.50-0.2673
MIMAT0000313cel-miR-2583565577npl-4.2uuuuccuaAGGAGAGUUUUgg || |||||||| --aaauuaUCAUCUCAAAAag314119[ce6:II:5624690-5624708:+]0.56181370-9.50-0.2835
MIMAT0011454cel-miR-2209b3565577npl-4.2acuucgugUUGGCGAGUAGAGa || : ||||||| --------AAAUUAUCAUCUCa215114[ce6:II:5624690-5624703:+]0.56181427-9.95-1.0035
MIMAT0011454cel-miR-2209b3565577npl-4.2acuucgugUUGGCGAGUAGAGa || : ||||||| --------AAAUUAUCAUCUCa215114[ce6:II:5624690-5624703:+]0.56181427-9.95-1.0331
MIMAT0014446cel-miR-2953-5p3565577npl-4.2uaAAAGUGCUUGUGAAGACAu || :|| : ::|||||| uaUUCUACUCG-GUUUCUGUa2203958[ce6:II:5624728-5624747:+]0.56181296-12.79-0.1275
MIMAT0014446cel-miR-2953-5p3565577npl-4.2uaAAAGUGCUUGUGAAGACAu || :|| : ::|||||| uaUUCUACUCG-GUUUCUGUa2203958[ce6:II:5624728-5624747:+]0.56181296-12.79-0.1521
MIMAT0004215cel-miR-2533565577npl-4.2ggAAGGGUGUUGCGGAUGAUu |||||:| : :|||||| uuUUCCCGC-UUUUCUACUAg2207190[ce6:II:5624760-5624779:+]0.56181416-22.69-0.1034
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
npl-4.2; CELE_F59E12.5; F59E12.5cel-miR-353253UGACGAUCA-AAGGUGGGCCACU ||:|| |||:||:||||-AUGUUAUUAUUCUACUCGGUU-
npl-4.2; CELE_F59E12.5; F59E12.5cel-miR-353153UGACGAUCA-AAGGUGGGCCAcu| ||:|| | |||:||:||||AATGTTATTATTCTACTCGGTtt
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
npl-4.2RAID01585890cel-mir-253miRNAMI0000329npl-4.2mRNA3565577Prediction0.1828
npl-4.2RAID01890289cel-miR-253-3pmiRNAMIMAT0004215npl-4.2mRNA3565577Prediction0.1828
npl-4.2RAID01927615cel-mir-2953miRNAMI0013633npl-4.2mRNA3565577Prediction0.1828
npl-4.2RAID03521889cel-miR-4813-3pmiRNAMIMAT0020001npl-4.2mRNA3565577Prediction0.1828