DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015094 cel-miR-37* 173951 F59E12.6 cguggCGUUG-CC-U--GUGGGUGu |::|| || | ||||||| ugaagGUGACAGGUAUUCACCCACa 2 17 75 99 [ce6:II:5627117-5627141:-] 0.5000 141 7 -20.99 -0.9150 MIMAT0000312 cel-miR-257 173951 F59E12.6 agUG-ACCCAUGAGGACUAUGAg || | | | ||::||||||| gaACAUUGAU-CUUUUGAUACUc 2 21 710 731 [ce6:II:5626392-5626413:-] 0.5000 153 7 -23.57 -0.7659 MIMAT0000316 cel-miR-261 173951 F59E12.6 gcacuUUUGAUU-UUUCGAu |||: || |||||| cuuucAAAUGAAUAAAGCUg 2 15 806 825 [ce6:II:5626298-5626317:-] 0.5000 122 6 -7.99 -0.7581 MIMAT0000698 cel-miR-356 173951 F59E12.6 acuaaACAAGCGCAACGAGuu | ||: |||||| augaaUAUUUUAAUUGCUCca 3 17 401 421 [ce6:II:5626795-5626815:-] 0.5000 124 0 -6.10 -0.1336 MIMAT0005822 cel-miR-1019* 173951 F59E12.6 uuUUACUUUGAGCUUGUUA-CGAGUg ::|| | | | ||: || ||||| acGGUGUAUCAC-AAUUAUGGCUCAa 2 24 313 337 [ce6:II:5626879-5626903:-] 0.5000 121 0 -10.98 -0.8083 MIMAT0006768 cel-miR-1828 173951 F59E12.6 ugaUAGU-GAAUUUAC--GAAGGUCa |||: | |||: | ||||||| ucaAUCGUCAUAAGCGACCUUCCAGc 2 21 191 216 [ce6:II:5627000-5627025:-] 0.5000 154 7 -14.42 -0.3181 MIMAT0006770 cel-miR-1829b 173951 F59E12.6 augUUGGUAGAUCU---UCUAGCGaa || ||||| : |||||| uggAAAAAUCUAUGUCUUGAUCGCca 3 21 659 684 [ce6:II:5626439-5626464:-] 0.5000 127 0 -14.96 -0.1522 MIMAT0011426 cel-miR-2207* 173951 F59E12.6 acacACGUAACUCGGACACGUa || || || ||||||| caaaUGAAUAAAG-CUGUGCAa 2 19 810 830 [ce6:II:5626293-5626313:-] 0.5000 152 7 -11.74 -0.7989 MIMAT0011435 cel-miR-2210 173951 F59E12.6 ggaUUUUUAAC--UA--ACUAGACGGa ||||:||| || | |||||| ucaAAAAGUUGCCAUAAUUUUCUGCCa 2 21 155 181 [ce6:II:5627035-5627061:-] 0.5000 130 6 -13.77 -0.1222 MIMAT0011436 cel-miR-2210* 173951 F59E12.6 cacccaucucguuagCUGAAAu |||||| ucuuucggacuucagGACUUUa 2 8 738 759 [ce6:II:5626364-5626385:-] 0.5000 120 6 -8.11 -0.1002 MIMAT0011439 cel-miR-2212 173951 F59E12.6 guUUCAGUCGGA-UACUAGACGGu ||||:: | | || |||||| aaAAGUUGCCAUAAUUUUCUGCCa 2 22 158 181 [ce6:II:5627035-5627058:-] 0.5000 132 6 -21.23 -0.1198 MIMAT0011446 cel-miR-2215 173951 F59E12.6 uuUGUUGUGCGCGAUGCUAAGa :||| || :|||||||| ugGCAAAAC-AAUUACGAUUCa 2 21 454 474 [ce6:II:5626742-5626762:-] 0.5000 154 7 -14.79 -1.1727 MIMAT0011447 cel-miR-2216 173951 F59E12.6 cgGAUGGCUGAAUUUUAC-ACg || || :| ||||||| || acCUUCCAGC-UAAAAUGAUGc 2 20 207 227 [ce6:II:5626989-5627009:-] 0.5000 125 0 -17.55 -0.2784 MIMAT0011459 cel-miR-2219* 173951 F59E12.6 cugcuacacGCUCUCUUUCGACa :|| | ||||||| ucuuucaaaUGA-AUAAAGCUGu 2 15 805 826 [ce6:II:5626297-5626318:-] 0.5000 144 7 -11.33 -0.9694 MIMAT0000043 cel-miR-71 173951 F59E12.6 agugauggguacAGAAAGu |||||| auuuauuauguuUCUUUCa 2 8 793 811 [ce6:II:5626312-5626330:-] 0.5000 120 6 -10.89 -0.1658 MIMAT0000049 cel-miR-77 173951 F59E12.6 acCUGUCGAUACCGGACUACUu |||| |||| |||||| guGACAUCUAU---AUGAUGAa 2 21 387 405 [ce6:II:5626811-5626829:-] 0.5000 128 6 -15.83 -0.1286 MIMAT0000058 cel-miR-85 173951 F59E12.6 cgUGC-UGAAAAGUUUAUGAAACAu |:| |||| |:| : ||||||| aaAUGAACUUAUUAUGAACUUUGUu 2 23 759 783 [ce6:II:5626340-5626364:-] 0.5000 165 7 -13.52 -0.9125 MIMAT0000060 cel-miR-87 173951 F59E12.6 cgUGUGGACUUUGAAACGAGug |:|::| || |||||| gaAUAUUUUAA---UUGCUCca 3 21 403 421 [ce6:II:5626795-5626813:-] 0.5000 128 0 -9.75 -0.1250 MIMAT0000288 cel-miR-233 173951 F59E12.6 ggCGUGUACGCGUAACGAGuu | |:|| : ||||||| auGAAUAUUUUAAUUGCUCca 3 20 401 421 [ce6:II:5626795-5626815:-] 0.5000 135 0 -12.05 -0.1349 MIMAT0000290 cel-miR-235 173951 F59E12.6 aguccggccccucuCACGUUAu ||||||| aaaugaauaaagcuGUGCAAUa 2 9 811 832 [ce6:II:5626291-5626312:-] 0.5000 140 7 -10.18 -1.1566 MIMAT0000291 cel-miR-236 173951 F59E12.6 ucGCAGUA-AUGGACUGU-CAUAAu :||:|| | ||||| ||||| guUGUUAUGAAGGUGACAGGUAUUc 2 22 68 92 [ce6:II:5627124-5627148:-] 0.5000 128 0 -14.22 -0.2040 MIMAT0000314 cel-miR-259 173951 F59E12.6 acgauggucuaauccUACUCUAAa |||||||| auaaagcugugcaauAUGAGAUUu 2 10 817 840 [ce6:II:5626283-5626306:-] 0.5000 145 7 -12.83 -0.7571 MIMAT0000697 cel-miR-355 173951 F59E12.6 guaucgaguCCGAUUUUGUUu ||| ||||||| aacauugauGGC-AAAACAAu 2 13 446 465 [ce6:II:5626751-5626770:-] 0.5000 146 7 -12.06 -0.3367

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score F59E12.6 RAID00158713 cel-miR-233-3p miRNA MIMAT0000288 F59E12.6 mRNA 173951 Prediction 0.1828 F59E12.6 RAID00467382 cel-miR-77-3p miRNA MIMAT0000049 F59E12.6 mRNA 173951 Prediction 0.1828 F59E12.6 RAID00709212 cel-miR-259-5p miRNA MIMAT0000314 F59E12.6 mRNA 173951 Prediction 0.1828 F59E12.6 RAID00778844 cel-miR-71-5p miRNA MIMAT0000043 F59E12.6 mRNA 173951 Prediction 0.1828 F59E12.6 RAID01242401 cel-miR-85-3p miRNA MIMAT0000058 F59E12.6 mRNA 173951 Prediction 0.1828 F59E12.6 RAID01911548 cel-miR-235-3p miRNA MIMAT0000290 F59E12.6 mRNA 173951 Prediction 0.1828 F59E12.6 RAID02402191 cel-miR-236-3p miRNA MIMAT0000291 F59E12.6 mRNA 173951 Prediction 0.1828 F59E12.6 RAID03026980 cel-miR-87-3p miRNA MIMAT0000060 F59E12.6 mRNA 173951 Prediction 0.1828 F59E12.6 RAID03300475 cel-miR-355-5p miRNA MIMAT0000697 F59E12.6 mRNA 173951 Prediction 0.1828