DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015109 cel-miR-81* 179326 H24G06.1 agAGUCUAG-UGCCA-CUUUUGgc | | ||| ::| | |||||| uaUAAAAUCUGUGAUAGAAAACau 3 21 21 44 [ce6:V:9460308-9460331:+] 0.5428 130 0 -7.83 -0.1773 MIMAT0015109 cel-miR-81* 179326 H24G06.1 agAGUCUAGUGCCACUU-UUGGc | | ||:| |||| |||| guUAAUAUUAGUUUGAAUAACCa 2 21 49 71 [ce6:V:9460336-9460358:+] 0.5428 120 0 -6.66 -1.2831 MIMAT0015114 cel-miR-238* 179326 H24G06.1 cgaaacUUGCAGGCUCUUGUAGgu |||| ||| |||||| aauagaAACGAACGAAAACAUCga 3 19 84 107 [ce6:V:9460371-9460394:+] 0.5428 146 0 -17.31 -0.1951 MIMAT0015116 cel-miR-240* 179326 H24G06.1 guaagaucagaguuUUAGGAGc :|||||| -----aaacacuguGAUCCUCc 2 9 1 17 [ce6:V:9460288-9460304:+] 0.5428 124 6 -9.32 -0.7217 MIMAT0000321 cel-miR-265 179326 H24G06.1 uauggugggAAGGAGGGAGu || ||||||: auuuuuugaUUGCUCCCUUu 2 12 173 192 [ce6:V:9460460-9460479:+] 0.5428 131 0 -12.78 -0.1350 MIMAT0000698 cel-miR-356 179326 H24G06.1 acUAAACAAGCGCAACGAGuu |||| ||:| |||||| ucAUUU-UUUG-AUUGCUCcc 3 20 171 189 [ce6:V:9460458-9460476:+] 0.5428 135 0 -9.76 -0.1703 MIMAT0015239 cel-miR-786* 179326 H24G06.1 caUUUAUGGGGUUGACUAUAAGc :|||| || |: |||||| uuGAAUAACC--AUAAAUAUUCu 2 22 61 81 [ce6:V:9460348-9460368:+] 0.5428 126 6 -9.56 -0.1225 MIMAT0005033 cel-miR-1020 179326 H24G06.1 gacuuucacaguguCUUAUUa |||||| guuaauauuaguuuGAAUAAc 2 8 49 69 [ce6:V:9460336-9460356:+] 0.5428 120 6 -4.21 -0.1742 MIMAT0015266 cel-miR-1822* 179326 H24G06.1 cggcuaucGAAAGGGUCUCUUUGa :|||: | |||||| ucccuuuuUUUUUAAAUAGAAACa 2 17 186 209 [ce6:V:9460473-9460496:+] 0.5428 124 6 -9.48 -0.3195 MIMAT0015266 cel-miR-1822* 179326 H24G06.1 cgGCUAUCGAAAGGG---UCUCUUUGa | ||| | |:|: | |||||| aaCCAUAAAUAUUCUGAAAUAGAAACg 2 23 67 93 [ce6:V:9460354-9460380:+] 0.5428 121 6 -10.80 -0.1073 MIMAT0011425 cel-miR-2207 179326 H24G06.1 gaauaugugucagaGUUAAGUgu :|||||| auuaaauugaugaaUAAUUCAga 3 10 296 318 [ce6:V:9460583-9460605:+] 0.5428 121 0 -5.85 -0.2411 MIMAT0011433 cel-miR-2209c* 179326 H24G06.1 uuuguuCUGCACGC-CAAUG-UGAg ||| ||:| |||| ||| uugcuuGACUUGUGUUUUACAACUg 2 18 265 289 [ce6:V:9460552-9460576:+] 0.5428 120 0 -12.23 -1.2385 MIMAT0011444 cel-miR-2214 179326 H24G06.1 uugcggccaguucaacAACAGUUAc ||||:||| gugauagaaaacauauUUGUUAAUa 2 10 31 55 [ce6:V:9460318-9460342:+] 0.5428 129 0 -4.96 -0.1158 MIMAT0011455 cel-miR-2218a 179326 H24G06.1 acuccgaauuuugaacAUCAAAc |||||| acauauuuguuaauauUAGUUUg 2 8 41 63 [ce6:V:9460328-9460350:+] 0.5428 120 6 -8.61 -0.2591 MIMAT0011463 cel-miR-2221 179326 H24G06.1 ugaucgccAGACCAUAGUGAac |:| ||||||| uguucacuUUUUAUAUCACUca 3 15 227 248 [ce6:V:9460514-9460535:+] 0.5428 130 0 -7.02 -0.1297 MIMAT0000004 cel-miR-2 179326 H24G06.1 cgugUAGU-UUCGACCGACACUAu ||:| || | ||||||| uccaAUUAUAAAAU--CUGUGAUa 2 20 15 36 [ce6:V:9460302-9460323:+] 0.5428 143 7 -11.65 -1.2977 MIMAT0000004 cel-miR-2 179326 H24G06.1 cguguaguuucgaccGACACUAu ||||||| ----------aaacaCUGUGAUc 2 9 1 13 [ce6:V:9460288-9460300:+] 0.5428 140 7 -9.66 -0.9049 MIMAT0000014 cel-miR-43 179326 H24G06.1 cgcuGUCGUUCAUUU-GACACUAu || : | ||| ||||||| ccucCAAUUAUAAAAUCUGUGAUa 2 20 13 36 [ce6:V:9460300-9460323:+] 0.5428 150 7 -11.16 -1.3031 MIMAT0000014 cel-miR-43 179326 H24G06.1 cgcugucguucaUUUGACACUAu | |||||||| ----------aaACACUGUGAUc 2 12 1 13 [ce6:V:9460288-9460300:+] 0.5428 147 7 -10.01 -0.9116 MIMAT0000021 cel-miR-50 179326 H24G06.1 ggguucUUAUGGUCUGUAUAGu :||| | ||||||: aucuguGAUAGAAAACAUAUUu 2 17 27 48 [ce6:V:9460314-9460335:+] 0.5428 136 0 -7.51 -0.1004 MIMAT0000049 cel-miR-77 179326 H24G06.1 accugucgauaccgGACUACUu :|||||| uguauuuuauuaaaUUGAUGAa 2 9 288 309 [ce6:V:9460575-9460596:+] 0.5428 124 6 -10.05 -0.4532 MIMAT0000059 cel-miR-86 179326 H24G06.1 cugacaccguuucGUAAGUGAAu ::||||||| aaaugccuucccuUGUUCACUUu 2 11 214 236 [ce6:V:9460501-9460523:+] 0.5428 142 7 -7.98 -0.9157 MIMAT0000060 cel-miR-87 179326 H24G06.1 cguguggacuuugaAACGAGug |||||| cgcucauuuuuugaUUGCUCcc 3 9 168 189 [ce6:V:9460455-9460476:+] 0.5428 120 0 -13.42 -0.1768 MIMAT0000061 cel-miR-90 179326 H24G06.1 uccccguaaGUUUGUUGUAUAGu :|:| |||||||: aaucugugaUAGAAAACAUAUUu 2 15 26 48 [ce6:V:9460313-9460335:+] 0.5428 138 0 -8.11 -0.1004 MIMAT0000282 cel-miR-124 179326 H24G06.1 accGUAAGUGGCGC-ACGGAAu || |||: || |||||| uauCACUCAUGACGAUGCCUUc 2 19 240 261 [ce6:V:9460527-9460548:+] 0.5428 126 6 -15.35 -0.8968 MIMAT0000288 cel-miR-233 179326 H24G06.1 ggcGUGUACGCGUAACGAGuu ||: | : ||||||| gcuCAUUUUUUGAUUGCUCcc 3 19 169 189 [ce6:V:9460456-9460476:+] 0.5428 130 0 -12.06 -0.1752 MIMAT0000306 cel-miR-250 179326 H24G06.1 acGGUUGUCAACU--GACACUAa ||||: | | ||||||| cuCCAAUUAUAAAAUCUGUGAUa 2 20 14 36 [ce6:V:9460301-9460323:+] 0.5428 146 7 -14.44 -1.3031 MIMAT0000306 cel-miR-250 179326 H24G06.1 acgguugucaacUGACACUAa |||||||| --------aaacACUGUGAUc 2 10 1 13 [ce6:V:9460288-9460300:+] 0.5428 145 7 -10.07 -0.9116 MIMAT0000697 cel-miR-355 179326 H24G06.1 guaucgaguccgaUUUUGUuu |||||| aaaucugugauagAAAACAua 3 9 25 45 [ce6:V:9460312-9460332:+] 0.5428 120 0 -4.42 -0.1773 MIMAT0004220 cel-miR-785 179326 H24G06.1 agauguguuuuguUAAGUGAAu :||||||| aaugccuucccuuGUUCACUUu 2 10 215 236 [ce6:V:9460502-9460523:+] 0.5428 141 7 -8.89 -0.9157 MIMAT0004232 cel-miR-797 179326 H24G06.1 agaAGAGUAACACUAACGACACUAu || ||| | | ||||||| uccUCCAAUUAUAAAAUCUGUGAUa 2 23 12 36 [ce6:V:9460299-9460323:+] 0.5428 154 7 -11.86 -1.3017 MIMAT0004232 cel-miR-797 179326 H24G06.1 agaagaguaacacuaacGACACUAu ||||||| ------------aaacaCUGUGAUc 2 9 1 13 [ce6:V:9460288-9460300:+] 0.5428 140 7 -9.66 -0.9214

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score H24G06.1 RAID00125267 cel-miR-797-5p miRNA MIMAT0004232 H24G06.1 mRNA 179326 Prediction 0.2381 H24G06.1 RAID01042689 cel-miR-87-3p miRNA MIMAT0000060 H24G06.1 mRNA 179326 Prediction 0.1828 H24G06.1 RAID01282037 cel-miR-355-5p miRNA MIMAT0000697 H24G06.1 mRNA 179326 Prediction 0.1828 H24G06.1 RAID01557826 cel-miR-47-3p miRNA MIMAT0000018 H24G06.1 mRNA 179326 Prediction 0.1828 H24G06.1 RAID02230445 cel-miR-233-3p miRNA MIMAT0000288 H24G06.1 mRNA 179326 Prediction 0.1828 H24G06.1 RAID02530254 cel-miR-77-3p miRNA MIMAT0000049 H24G06.1 mRNA 179326 Prediction 0.1828 H24G06.1 RAID02644921 cel-miR-90-3p miRNA MIMAT0000061 H24G06.1 mRNA 179326 Prediction 0.1828 H24G06.1 RAID02682607 cel-miR-785-3p miRNA MIMAT0004220 H24G06.1 mRNA 179326 Prediction 0.1828 H24G06.1 RAID02715258 cel-miR-86-5p miRNA MIMAT0000059 H24G06.1 mRNA 179326 Prediction 0.2202 H24G06.1 RAID03053885 cel-miR-250-3p miRNA MIMAT0000306 H24G06.1 mRNA 179326 Prediction 0.2202 H24G06.1 RAID03083833 cel-miR-50-5p miRNA MIMAT0000021 H24G06.1 mRNA 179326 Prediction 0.1828 H24G06.1 RAID03100357 cel-miR-124-3p miRNA MIMAT0000282 H24G06.1 mRNA 179326 Prediction 0.2202 H24G06.1 RAID03565461 cel-miR-2-3p miRNA MIMAT0000004 H24G06.1 mRNA 179326 Prediction 0.2202 H24G06.1 RAID03843592 cel-miR-43-3p miRNA MIMAT0000014 H24G06.1 mRNA 179326 Prediction 0.2202