DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015099 cel-miR-51* 177437 H34C03.2 acguggacAUGGACGAA-GGUAc ||: ||||| |||| uuuaagccUAUGUGCUUCCCAUc 2 15 576 598 [ce6:IV:6762336-6762358:+] 0.5208 122 0 -14.82 -0.9417 MIMAT0015112 cel-miR-229* 177437 H34C03.2 gauacuGUGGGCUAUGGAAAGa ||:|| | :|||||| uuuaccCAUCCUA-GCCUUUCu 2 17 532 552 [ce6:IV:6762292-6762312:+] 0.5208 138 6 -16.69 -0.1072 MIMAT0015119 cel-miR-247* 177437 H34C03.2 ccauuaaucuuugaAAAGAGau |||||| auucgcuucugugaUUUCUCac 3 9 328 349 [ce6:IV:6762088-6762109:+] 0.5682 120 0 -7.29 -0.1003 MIMAT0015240 cel-miR-788* 177437 H34C03.2 gcuAAGAUUAGGUAAAGg || || ||||||| uuuUUGGAAACCAUUUCa 2 16 793 810 [ce6:IV:6762553-6762570:+] 0.5208 151 7 -10.38 -1.0128 MIMAT0015240 cel-miR-788* 177437 H34C03.2 gcuAAGAUUAGGUAAAGg ||| : |||||||| cgcUUC-GCUCCAUUUCa 2 16 151 167 [ce6:IV:6761911-6761927:+] 0.5682 149 7 -14.45 -0.7997 MIMAT0005031 cel-miR-1018 177437 H34C03.2 gacauucAGGUUACUAGAGAGa ||||| ||||||: cucuuccUCCAA--AUCUCUUc 2 16 439 458 [ce6:IV:6762199-6762218:+] 0.5682 136 0 -11.61 -0.1131 MIMAT0005522 cel-miR-1021 177437 H34C03.2 ggcuccuaAAGUGUACU--AGAGUGAa ||| ::||| ||||||| uuauucgcUUC-UGUGAUUUCUCACUu 2 18 326 351 [ce6:IV:6762086-6762111:+] 0.5682 150 7 -16.25 -1.2101 MIMAT0006587 cel-miR-1820 177437 H34C03.2 cuuguAGUAGCUUUUUGUUAGUUUu |||| : |||||||| uguuuUCAUAUUCGUCCAAUCAAAu 2 21 366 390 [ce6:IV:6762126-6762150:+] 0.5682 148 7 -12.38 -0.6253 MIMAT0006771 cel-miR-1829c 177437 H34C03.2 auGUUGG--UAGA-ACUU-----AAAGCGaa |||:| ||:| ||:| |||||| ucCAAUCAAAUUUAUGGAGAUAUUUUCGCgu 3 22 380 410 [ce6:IV:6762140-6762170:+] 0.5682 126 0 -11.92 -0.1716 MIMAT0011437 cel-miR-2211* 177437 H34C03.2 gcagucuaccucuuaucUACCUCc |||||| uucguccaaucaaauuuAUGGAGa 2 8 376 399 [ce6:IV:6762136-6762159:+] 0.5682 120 6 -14.84 -0.1861 MIMAT0011446 cel-miR-2215 177437 H34C03.2 uuuguugugcgcgaUGCUAAGa ||||||| uugucggguaggaaACGAUUCu 2 9 99 120 [ce6:IV:6761859-6761880:+] 0.5682 140 7 -13.28 -0.3057 MIMAT0011449 cel-miR-1832b* 177437 H34C03.2 uuucacccggcucgcUAAGCGAc ||||||| guuuuucauaugcuuAUUCGCUu 2 9 313 335 [ce6:IV:6762073-6762095:+] 0.5682 140 7 -8.42 -0.8444 MIMAT0011455 cel-miR-2218a 177437 H34C03.2 acuccgaAUUUUGAA-CAUCAAAc | | ::|| ||||||| gaaaaugUCAUGUUUAGUAGUUUc 2 17 661 684 [ce6:IV:6762421-6762444:+] 0.5208 147 7 -6.29 -0.9591 MIMAT0011455 cel-miR-2218a 177437 H34C03.2 acucCGAAUUUUGAACAUCAAAc |||| : :| ||||||| auguGCUU-GUGC--GUAGUUUc 2 20 59 78 [ce6:IV:6761819-6761838:+] 0.4679 142 7 -10.12 -0.1105 MIMAT0011458 cel-miR-2218b* 177437 H34C03.2 agAGUGAUGUUUGAUGUUUAAa | ::| | :: |||||||| cgUAGUUUCUGG-UACAAAUUu 2 21 70 90 [ce6:IV:6761830-6761850:+] 0.5181 146 7 -9.18 -0.5235 MIMAT0011463 cel-miR-2221 177437 H34C03.2 ugaucgccagaccauAGUGAAc |||||| cgcuucugugauuucUCACUUu 2 8 331 352 [ce6:IV:6762091-6762112:+] 0.5682 120 6 -9.13 -0.1557 MIMAT0014446 cel-miR-2953-5p 177437 H34C03.2 uaaaagugcuuGUGAAGACAu |:||||||| auaugcuuauuCGCUUCUGUg 2 11 320 340 [ce6:IV:6762080-6762100:+] 0.5682 146 7 -16.62 -0.4108 MIMAT0000004 cel-miR-2 177437 H34C03.2 cguguaguuuCGACCGACACUAu ||| ||||||| augcuuauucGCU-UCUGUGAUu 2 14 322 343 [ce6:IV:6762082-6762103:+] 0.5682 143 7 -13.48 -0.8877 MIMAT0000014 cel-miR-43 177437 H34C03.2 cgcugucguucauuuGACACUAu ||||||| uaugcuuauucgcuuCUGUGAUu 2 9 321 343 [ce6:IV:6762081-6762103:+] 0.5682 140 7 -10.01 -0.8877 MIMAT0000030 cel-miR-58 177437 H34C03.2 uaACGG--CAUGACUUGCU-AGAGu ||:| ||| ||||| |||| uuUGUCGGGUAGGAAACGAUUCUCc 2 21 98 122 [ce6:IV:6761858-6761882:+] 0.5682 123 0 -17.92 -0.4655 MIMAT0000035 cel-miR-63 177437 H34C03.2 aaAGGUU--GAGCGAA--GUCACAGUAu || || | ||:|| | |||||| ucUCGAAAUCCCGUUUGAAAAUGUCAUg 2 23 645 672 [ce6:IV:6762405-6762432:+] 0.5208 124 6 -15.63 -0.1349 MIMAT0000036 cel-miR-64 177437 H34C03.2 aagccauugcgaagucACAGUAu |||||| aaaucccguuugaaaaUGUCAUg 2 8 650 672 [ce6:IV:6762410-6762432:+] 0.5208 120 6 -12.34 -0.1376 MIMAT0000037 cel-miR-65 177437 H34C03.2 aagccaaugcgaagucACAGUAu |||||| aaaucccguuugaaaaUGUCAUg 2 8 650 672 [ce6:IV:6762410-6762432:+] 0.5208 120 6 -12.34 -0.1362 MIMAT0000038 cel-miR-66 177437 H34C03.2 agUGUAGGG--AUUAGUCACAGUAc | ||||| | : | |||||| cgAAAUCCCGUUUGAAAAUGUCAUg 2 22 648 672 [ce6:IV:6762408-6762432:+] 0.5208 124 6 -17.32 -0.1336 MIMAT0000042 cel-miR-70 177437 H34C03.2 uaCCUUUGUGGUUGCUGCAUAAu |||:|:|:: | :|||||| auGGAGAUAUUUUC-GCGUAUUa 2 22 393 414 [ce6:IV:6762153-6762174:+] 0.5682 143 6 -24.72 -0.1399 MIMAT0000043 cel-miR-71 177437 H34C03.2 agUGAUGGGUACAGAAAGu ::| :: :|||||||| guGUUUUUAGUGUCUUUCu 2 18 228 246 [ce6:IV:6761988-6762006:+] 0.5682 149 7 -11.91 -1.0653 MIMAT0000047 cel-miR-75 177437 H34C03.2 acuucGGCCAACCAUCGAAAUu :| ||| | ||||||| ccauuUCAGUUUG-AGCUUUAu 2 18 160 180 [ce6:IV:6761920-6761940:+] 0.5682 151 7 -8.50 -0.3274 MIMAT0000048 cel-miR-76 177437 H34C03.2 aguuccgaAGUAGUUGUUGCUu ||||: |||||| uuuuaaaaUCAUUUUCAACGAu 2 15 555 576 [ce6:IV:6762315-6762336:+] 0.5208 126 6 -13.70 -0.1000 MIMAT0000051 cel-miR-79 177437 H34C03.2 ucgaaaccaUUGGA-UCGAAAUa |:::| ||||||| cuccauuucAGUUUGAGCUUUAu 2 14 158 180 [ce6:IV:6761918-6761940:+] 0.5682 144 7 -9.63 -0.3574 MIMAT0000059 cel-miR-86 177437 H34C03.2 cugacaccguuucguaAGUGAAu |||||| ucgcuucugugauuucUCACUUu 2 8 330 352 [ce6:IV:6762090-6762112:+] 0.5682 120 6 -11.36 -0.1572 MIMAT0000284 cel-miR-229 177437 H34C03.2 gcuaccuuuucuauuggucACAGUAa |||||| ucgaaaucccguuugaaaaUGUCAUg 2 8 647 672 [ce6:IV:6762407-6762432:+] 0.5208 120 6 -9.56 -0.1349 MIMAT0000306 cel-miR-250 177437 H34C03.2 acgguugucaacuGACACUAa ||||||| ugcuuauucgcuuCUGUGAUu 2 9 323 343 [ce6:IV:6762083-6762103:+] 0.5682 140 7 -13.10 -0.8877 MIMAT0004216 cel-miR-255 177437 H34C03.2 gacauuuuuuaGAGAAGUCAAa | :||||||| ucgcuucgcucCAUUUCAGUUu 2 12 150 171 [ce6:IV:6761910-6761931:+] 0.5682 143 7 -10.62 -0.5797 MIMAT0004220 cel-miR-785 177437 H34C03.2 agauguguuuuguuaAGUGAAu |||||| cgcuucugugauuucUCACUUu 2 8 331 352 [ce6:IV:6762091-6762112:+] 0.5682 120 6 -7.48 -0.1603 MIMAT0004232 cel-miR-797 177437 H34C03.2 agAAGAGUA-AC-ACUAA-C---GACACUAu ||:|||| || | ||| | ||||||| guUUUUCAUAUGCUUAUUCGCUUCUGUGAUu 2 24 313 343 [ce6:IV:6762073-6762103:+] 0.5682 159 7 -16.88 -0.8809

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score H34C03.2 RAID00361386 cel-miR-75-3p miRNA MIMAT0000047 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID00588001 cel-miR-255-3p miRNA MIMAT0004216 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID00803079 cel-miR-76-3p miRNA MIMAT0000048 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID01260270 cel-miR-77-3p miRNA MIMAT0000049 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID01268616 cel-miR-64-5p miRNA MIMAT0000036 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID01413568 cel-miR-785-3p miRNA MIMAT0004220 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID01441578 cel-miR-86-5p miRNA MIMAT0000059 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID01585447 cel-miR-71-5p miRNA MIMAT0000043 H34C03.2 mRNA 177437 Prediction 0.2202 H34C03.2 RAID01715084 cel-miR-65-5p miRNA MIMAT0000037 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID01784141 cel-miR-250-3p miRNA MIMAT0000306 H34C03.2 mRNA 177437 Prediction 0.2202 H34C03.2 RAID01789036 cel-miR-229-5p miRNA MIMAT0000284 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID01873412 cel-miR-63-3p miRNA MIMAT0000035 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID02156406 cel-miR-66-5p miRNA MIMAT0000038 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID02189814 cel-miR-70-3p miRNA MIMAT0000042 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID02289359 cel-miR-2-3p miRNA MIMAT0000004 H34C03.2 mRNA 177437 Prediction 0.2202 H34C03.2 RAID02588684 cel-miR-43-3p miRNA MIMAT0000014 H34C03.2 mRNA 177437 Prediction 0.2202 H34C03.2 RAID02921255 cel-miR-797-5p miRNA MIMAT0004232 H34C03.2 mRNA 177437 Prediction 0.2381 H34C03.2 RAID03034043 cel-miR-79-3p miRNA MIMAT0000051 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID03874678 cel-mir-2953 miRNA MI0013633 H34C03.2 mRNA 177437 Prediction 0.1828 H34C03.2 RAID03999635 cel-miR-58a-3p miRNA MIMAT0000030 H34C03.2 mRNA 177437 Prediction 0.1828