DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015111 cel-miR-124* 174067 atg-16.2 ugauuuCAGUGAUCCCACGUAcg ||:|: | |||||| aucuguGUUAUAAAUGUGCAUau 3 18 42 64 [ce6:II:6451050-6451072:-] 0.5524 133 0 -12.36 -0.1171 MIMAT0015114 cel-miR-238* 174067 atg-16.2 cgaaacuugcaggcuCUUGUAGGu ||||||:| cagauuuuucauuauGAACAUUC- 2 10 111 133 [ce6:II:6450981-6451003:-] 0.4664 129 0 -9.22 -0.1067 MIMAT0000320 cel-miR-264 174067 atg-16.2 guaUUGUUGUU--GGUGGGCGg || ||:|: ::|||||| uaaAAAAAUAGUUUUACCCGCg 2 18 72 93 [ce6:II:6451021-6451042:-] 0.5524 136 6 -16.55 -0.3620 MIMAT0015240 cel-miR-788* 174067 atg-16.2 gcUAAGAUUAGGUAAAGg :| | ||||||||: auGUGCAUAUCCAUUUUu 2 17 55 72 [ce6:II:6451042-6451059:-] 0.5524 136 0 -10.49 -0.1668 MIMAT0015241 cel-miR-797* 174067 atg-16.2 uaaagugucuuugguUACUUUu |||||| -----ucuucaauguAUGAAAu 2 8 1 17 [ce6:II:6451097-6451113:-] 0.5524 120 6 -4.61 -0.1931 MIMAT0006768 cel-miR-1828 174067 atg-16.2 ugAUAGUGAAUUUACGAAGGUCa | |: | |: | |||:||| cgUUUUUCAUGUUUUCUUUCAGa 2 22 92 114 [ce6:II:6451000-6451022:-] 0.5026 133 0 -10.07 -0.1107 MIMAT0011426 cel-miR-2207* 174067 atg-16.2 acacacguaacucggACACGUa |||||| caucuguguuauaaaUGUGCAu 2 8 41 62 [ce6:II:6451052-6451073:-] 0.5524 120 6 -13.42 -0.1714 MIMAT0011447 cel-miR-2216 174067 atg-16.2 cggauGGCUGAAU-UUUACACg |:| ||| ||||||| aucauCUGUGUUAUAAAUGUGc 2 17 39 60 [ce6:II:6451054-6451075:-] 0.5524 151 7 -13.69 -1.0507 MIMAT0000003 cel-miR-1 174067 atg-16.2 augUAUGAAGAAA----UGUAAGgu || :||| || |||||| cagAUUUUUCAUUAUGAACAUUC-- 3 19 111 133 [ce6:II:6450981-6451003:-] 0.4664 129 0 -4.69 -0.2537 MIMAT0000021 cel-miR-50 174067 atg-16.2 ggguucuUA-UGGUCUGUAUAGu || | :: :|||||| cuguguuAUAAAUGUGCAUAUCc 2 16 44 66 [ce6:II:6451048-6451070:-] 0.5524 126 6 -6.47 -0.2974 MIMAT0000034 cel-miR-62 174067 atg-16.2 gaCAUUCGAUCUA-AUGUAUAGu ||: || || |:|||||| cuGUGUUAUAAAUGUGCAUAUCc 2 21 44 66 [ce6:II:6451048-6451070:-] 0.5524 139 6 -12.85 -0.3025 MIMAT0000043 cel-miR-71 174067 atg-16.2 agugauggguacAGAAAGu |||||| uuuuucauguuuUCUUUCa 2 8 94 112 [ce6:II:6451002-6451020:-] 0.5026 120 6 -12.39 -0.2402 MIMAT0000061 cel-miR-90 174067 atg-16.2 ucccCGUAA-GUUUGU-UGUAUAGu |::|| :|||:: :|||||| aucuGUGUUAUAAAUGUGCAUAUCc 2 20 42 66 [ce6:II:6451048-6451072:-] 0.5524 141 6 -6.70 -0.2999 MIMAT0004231 cel-miR-796 174067 atg-16.2 aaugauuGGAGUUGAUGUAAGgu | |:| |||||| gauuuuuCAUUAUGAACAUUC-- 3 17 113 133 [ce6:II:6450981-6451001:-] 0.4664 124 0 -7.37 -0.2537

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 atg-16.2; K06A1.5 cel-miR-256 29 69 -AUGUC-----AGAAGA-----------UACGUA-AGGU- ||||| || ||| :||||| |||| GUACAGAAUCAUCAUCUGUGUUAUAAAUGUGCAUAUCCAU atg-16.2; K06A1.5 cel-miR-264 71 94 GUAUUG--UUGUU--GGUGGGCGG ||| ||:|: ::|||||| -UUAAAAAAAUAGUUUUACCCGCG atg-16.2; K06A1.5 cel-miR-271 82 95 UUACGAAAGGGUGGGCCGCU |:::|||| ||| ------GUUUUACCC-GCGU atg-16.2; K06A1.5 cel-miR-35 79 96 UGACGAUCAAAGGUGGGC-CACU |||||| :||||| || ----AUAGUUU-UACCCGCGUU- atg-16.2; K06A1.5 cel-miR-37 80 96 UGACGUUCACAAGUGGGC-CACU ||| ||:||||| || -----UAGU-UUUACCCGCGUU- atg-16.2; K06A1.5 cel-miR-71 84 102 AGUGAUGGGUACAGAAAGU- :|||||: ||:||||| --UUUACCCGCGUUUUUCAU atg-16.2; K06A1.5 cel-miR-256 42 67 auGUCAGAAGAU----ACGUA-AGGU | || || || ||||| |||| atCTGTGTTATAAATGTGCATATCCA atg-16.2; K06A1.5 cel-miR-264 72 93 gUAUUGUUGUU--GGUGGGCGg | || ||:|: ::|||||| tAAAAAAATAGTTTTACCCGCg atg-16.2; K06A1.5 cel-miR-271 78 94 UUA-CGAAAGGGUGGGCCGCu ||| |:||| |||| ||| AATAGTTTT---ACCC-GCGt atg-16.2; K06A1.5 cel-miR-35 75 96 ugacgAUCAAAGGUGGGC-CAcu |||||| :||||| || aaaaaTAGTTT-TACCCGCGTtt atg-16.2; K06A1.5 cel-miR-37 75 96 ugacguUCACAAGUGGGC-CAcu ||| ||:||||| || aaaaatAGT-TTTACCCGCGTtt atg-16.2; K06A1.5 cel-miR-71 82 100 agugAUGGGUACAGAAAGU |||||: ||:||||| gtttTACCCGCGTTTTTCA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score atg-16.2 RAID00079004 cel-miR-71-5p miRNA MIMAT0000043 atg-16.2 mRNA 174067 Prediction 0.1828 atg-16.2 RAID00318110 cel-miR-50-5p miRNA MIMAT0000021 atg-16.2 mRNA 174067 Prediction 0.1828 atg-16.2 RAID00355154 cel-miR-1-3p miRNA MIMAT0000003 atg-16.2 mRNA 174067 Prediction 0.1828 atg-16.2 RAID00551898 cel-miR-796 miRNA MIMAT0004231 atg-16.2 mRNA 174067 Prediction 0.1828 atg-16.2 RAID01065937 cel-miR-62 miRNA MIMAT0000034 atg-16.2 mRNA 174067 Prediction 0.1828 atg-16.2 RAID03964474 cel-miR-90-3p miRNA MIMAT0000061 atg-16.2 mRNA 174067 Prediction 0.1828