DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015099 cel-miR-51* 172355 K06A5.8 acguggACAUGGACGAA-GGUAc | ||:| |||| |||| uuucgaUUUAUCAGCUUCCCAUa 2 17 685 707 [ce6:I:6474254-6474276:-] 0.5000 124 0 -11.95 -0.8463 MIMAT0015110 cel-miR-84* 172355 K06A5.8 cggcucaaucaacuuUGUAACAc ||||||| aaucuuucaaucuccACAUUGUc 2 9 626 648 [ce6:I:6474313-6474335:-] 0.5000 140 7 -6.02 -0.3480 MIMAT0015116 cel-miR-240* 172355 K06A5.8 guaagaucagaguuuUAGGAGc |||||| uucagugcagauggcAUCCUCa 2 8 144 165 [ce6:I:6476860-6476871,6476920-6476929:-] 0.7060 120 6 -12.54 -0.1181 MIMAT0000309 cel-miR-253* 172355 K06A5.8 ccagucaCAAU-CACUCCACac | || | |||||| aauauccGAUAUGAGAGGUGau 3 15 244 265 [ce6:I:6476982-6477003:-] 0.7158 125 0 -10.12 -0.1107 MIMAT0000309 cel-miR-253* 172355 K06A5.8 ccagucaCAAU-CACUCCACac | || | |||||| aauauccGAUAUGAGAGGUGau 3 15 70 91 [ce6:I:6476982-6477003:-] 0.7158 125 0 -10.12 -0.1555 MIMAT0000315 cel-miR-260 172355 K06A5.8 gauGUUCUCAAGCUGUAGUg || ||| ||||||| cauCACCAGU--GACAUCAg 2 18 42 59 [ce6:I:6477312-6477329:-] 0.7118 146 7 -11.21 -0.8557 MIMAT0005031 cel-miR-1018 172355 K06A5.8 gacauucagguuACUAGAGAGa ||||||||: ---------aucUGAUCUCUUu 2 11 1 13 [ce6:I:6476780-6476792:-] 0.5182 134 0 -12.44 -0.1064 MIMAT0005523 cel-miR-1022 172355 K06A5.8 cuACCGCAGGAUUGUUAC-UAGAa |||| |||| ::||| |||| aaUGGC-UCCU-UUGAUGUAUCUc 2 22 268 289 [ce6:I:6476958-6476979:-] 0.7158 125 0 -18.67 -0.7217 MIMAT0005523 cel-miR-1022 172355 K06A5.8 cuaccgcaggauuguuACUAGAa |||||| ucccaaccguuaaaucUGAUCUc 2 8 394 416 [ce6:I:6476783-6476805:-] 0.6962 120 6 -9.50 -0.2531 MIMAT0005523 cel-miR-1022 172355 K06A5.8 cuaccgcaggauuguuACUAGAa |||||| -------------aucUGAUCUc 2 8 1 10 [ce6:I:6476783-6476792:-] 0.6962 120 6 -5.12 -0.2645 MIMAT0005523 cel-miR-1022 172355 K06A5.8 cuACCGCAGGAUUGUUAC-UAGAa |||| |||| ::||| |||| aaUGGC-UCCU-UUGAUGUAUCUc 2 22 94 115 [ce6:I:6476958-6476979:-] 0.7158 125 0 -18.67 -0.8474 MIMAT0006586 cel-miR-1819 172355 K06A5.8 agGUAGUUCGAGUUAGUAAGGu | ||| | |: ||||||| auCCUCAUGAUUUCUCAUUCCu 2 21 333 354 [ce6:I:6476845-6476866:-] 0.6962 156 7 -16.06 -0.5879 MIMAT0006586 cel-miR-1819 172355 K06A5.8 agGUAGUUCGAGUUAGUAAGGu | ||| | |: ||||||| auCCUCAUGAUUUCUCAUUCCu 2 21 159 180 [ce6:I:6476845-6476866:-] 0.6962 156 7 -16.06 -0.6998 MIMAT0006589 cel-miR-1822 172355 K06A5.8 ucucaaaaagacuccCGUCGAg |||||| gugcgauucaguaauGCAGCUu 2 8 185 206 [ce6:I:6477085-6477106:-] 0.6733 120 6 -9.61 -0.1516 MIMAT0006589 cel-miR-1822 172355 K06A5.8 ucucaaaaagacuccCGUCGAg |||||| gugcgauucaguaauGCAGCUu 2 8 11 32 [ce6:I:6477085-6477106:-] 0.6733 120 6 -9.61 -0.1659 MIMAT0006768 cel-miR-1828 172355 K06A5.8 ugAUAGUGAAUUUACGAAGGUCa | |: :|| || :|||||| ggUUUUUUUUUAA--UUUCCAGa 2 22 19 39 [ce6:I:6477332-6477352:-] 0.6333 134 6 -9.53 -0.1418 MIMAT0006769 cel-miR-1829a 172355 K06A5.8 uuaucucuUUAAGGUUACCAAc | ||: :|||||| gaauuuauAUUUUAGAUGGUUu 2 15 2 23 [ce6:I:6477348-6477369:-] 0.5549 134 6 -7.99 -0.2009 MIMAT0006776 cel-miR-1834 172355 K06A5.8 aaccuaGAGUUACCAACUAGAGa :| ||| ||||||| caaccgUUAAAU--CUGAUCUCu 2 18 397 417 [ce6:I:6476782-6476802:-] 0.6962 142 7 -11.04 -1.1116 MIMAT0006776 cel-miR-1834 172355 K06A5.8 aaccuagaguuaccaACUAGAGa ||||||| ------------aucUGAUCUCu 2 9 1 11 [ce6:I:6476782-6476792:-] 0.6962 140 7 -10.37 -1.2623 MIMAT0011428 cel-miR-2208a* 172355 K06A5.8 acuUCAUAUGGUCUUUGACGUa | ||| ::: :|||||| cuuAUUAU-UUGUUGACUGCAa 2 20 204 224 [ce6:I:6477067-6477087:-] 0.6733 129 6 -7.72 -0.1437 MIMAT0011428 cel-miR-2208a* 172355 K06A5.8 acuUCAUAUGGUCUUUGACGUa | ||| ::: :|||||| cuuAUUAU-UUGUUGACUGCAa 2 20 30 50 [ce6:I:6477067-6477087:-] 0.6733 129 6 -7.72 -0.2039 MIMAT0011432 cel-miR-2209a 172355 K06A5.8 acauCACAUUGGCGACUAGAGa || ||| : |||||||| aaccGU-UAAAU-CUGAUCUCu 2 19 398 417 [ce6:I:6476782-6476801:-] 0.6962 150 7 -19.11 -1.1138 MIMAT0011432 cel-miR-2209a 172355 K06A5.8 acaucacauuggcGACUAGAGa |||||||| -----------auCUGAUCUCu 2 10 1 11 [ce6:I:6476782-6476792:-] 0.6962 145 7 -14.84 -1.2623 MIMAT0011435 cel-miR-2210 172355 K06A5.8 ggaUUUUUAACUAACUAGACGGa ||: : ||| |||||||| cacAAGUGCCGAUCGAUCUGCCg 2 21 358 380 [ce6:I:6476819-6476841:-] 0.6962 160 7 -16.88 -0.3786 MIMAT0011435 cel-miR-2210 172355 K06A5.8 ggaUUUUUAACUAACUAGACGGa ||: : ||| |||||||| cacAAGUGCCGAUCGAUCUGCCg 2 21 184 206 [ce6:I:6476819-6476841:-] 0.6962 160 7 -16.88 -0.4039 MIMAT0011439 cel-miR-2212 172355 K06A5.8 guUUCAGUCGGAUA-CUAGACGGu |||| ||| || |||||||| acAAGU--GCCGAUCGAUCUGCCg 2 22 359 380 [ce6:I:6476819-6476840:-] 0.6962 165 7 -23.63 -0.3697 MIMAT0011439 cel-miR-2212 172355 K06A5.8 guUUCAGUCGGAUA-CUAGACGGu |||| ||| || |||||||| acAAGU--GCCGAUCGAUCUGCCg 2 22 185 206 [ce6:I:6476819-6476840:-] 0.6962 165 7 -23.63 -0.3946 MIMAT0011454 cel-miR-2209b 172355 K06A5.8 acUUCGUGUUGG-CGAGUAG-AGa |: : || || ||||||| || gcAGUUUCAUCCGGCUCAUCGUCa 2 21 497 520 [ce6:I:6474441-6474464:-] 0.5000 123 0 -17.15 -0.8492 MIMAT0011454 cel-miR-2209b 172355 K06A5.8 acuucGUGUUGGCGAG-UAGAGa |: ||:| :|| ||||| cuguuCGGAAUCUUUCAAUCUCc 2 18 618 640 [ce6:I:6474321-6474343:-] 0.5000 121 0 -14.68 -0.6641 MIMAT0000018 cel-miR-47 172355 K06A5.8 acuucUCU-CGCGGAGGU-ACUGu ||| || :| ||| |||| uuuccAGAUGCAUCACCAGUGACa 2 18 32 55 [ce6:I:6477316-6477339:-] 0.7118 120 0 -16.04 -0.9861 MIMAT0000030 cel-miR-58 172355 K06A5.8 uaacGGCAUGACUU--GCUAGAGu |||| | || :|||||| ccaaCCGU--UAAAUCUGAUCUCu 2 19 396 417 [ce6:I:6476782-6476803:-] 0.6962 130 6 -17.41 -0.1633 MIMAT0000030 cel-miR-58 172355 K06A5.8 uaacggcaugacuuGCUAGAGu :|||||| -----------aucUGAUCUCu 2 9 1 11 [ce6:I:6476782-6476792:-] 0.6962 124 6 -8.73 -0.2556 MIMAT0000053 cel-miR-80 172355 K06A5.8 agccgaaAGUUGAUUACUAGAGu |:|| | ||||||| ccaaccgUUAAAU-CUGAUCUCu 2 17 396 417 [ce6:I:6476782-6476803:-] 0.6962 146 7 -10.72 -1.1116 MIMAT0000053 cel-miR-80 172355 K06A5.8 agCCGAAAGUUGAUUAC-UAGAGu ||| || :|:||| ||||| auGGC--UCCUUUGAUGUAUCUCc 2 22 269 290 [ce6:I:6476957-6476978:-] 0.7158 122 0 -18.63 -0.9779 MIMAT0000053 cel-miR-80 172355 K06A5.8 agccgaaaguugauuACUAGAGu ||||||| ------------aucUGAUCUCu 2 9 1 11 [ce6:I:6476782-6476792:-] 0.6962 140 7 -8.37 -1.2623 MIMAT0000053 cel-miR-80 172355 K06A5.8 agCCGAAAGUUGAUUAC-UAGAGu ||| || :|:||| ||||| auGGC--UCCUUUGAUGUAUCUCc 2 22 95 116 [ce6:I:6476957-6476978:-] 0.7158 122 0 -18.63 -1.0741 MIMAT0000054 cel-miR-81 172355 K06A5.8 ugaUCGAAAGUGCUACUAGAGu | | || | ||||||| ccaACCGUUAAAUCUGAUCUCu 2 20 396 417 [ce6:I:6476782-6476803:-] 0.6962 147 7 -9.69 -1.1138 MIMAT0000054 cel-miR-81 172355 K06A5.8 ugAUCGAAAGUGCUAC-UAGAGu |:||| : :|||| ||||| aaUGGCUCCUUUGAUGUAUCUCc 2 21 268 290 [ce6:I:6476957-6476979:-] 0.7158 128 0 -17.26 -0.9688 MIMAT0000054 cel-miR-81 172355 K06A5.8 ugaucgaaagugcuACUAGAGu ||||||| -----------aucUGAUCUCu 2 9 1 11 [ce6:I:6476782-6476792:-] 0.6962 140 7 -8.37 -1.2623 MIMAT0000054 cel-miR-81 172355 K06A5.8 ugAUCGAAAGUGCUAC-UAGAGu |:||| : :|||| ||||| aaUGGCUCCUUUGAUGUAUCUCc 2 21 94 116 [ce6:I:6476957-6476979:-] 0.7158 128 0 -17.26 -1.0665 MIMAT0000055 cel-miR-82 172355 K06A5.8 ugaccGAAAGUGCUACUAGAGu | || | ||||||| ccaacCGUUAAAUCUGAUCUCu 2 18 396 417 [ce6:I:6476782-6476803:-] 0.6962 145 7 -9.69 -1.1138 MIMAT0000055 cel-miR-82 172355 K06A5.8 ugACCGAAAGUGCUAC-UAGAGu ||||| : :|||| ||||| aaUGGCUCCUUUGAUGUAUCUCc 2 21 268 290 [ce6:I:6476957-6476979:-] 0.7158 132 0 -19.97 -0.9688 MIMAT0000055 cel-miR-82 172355 K06A5.8 ugaccgaaagugcuACUAGAGu ||||||| -----------aucUGAUCUCu 2 9 1 11 [ce6:I:6476782-6476792:-] 0.6962 140 7 -8.37 -1.2623 MIMAT0000055 cel-miR-82 172355 K06A5.8 ugACCGAAAGUGCUAC-UAGAGu ||||| : :|||| ||||| aaUGGCUCCUUUGAUGUAUCUCc 2 21 94 116 [ce6:I:6476957-6476979:-] 0.7158 132 0 -19.97 -1.0665 MIMAT0000701 cel-miR-359 172355 K06A5.8 aagcaGUCU-CUUUCUGGUCACu |||| | | ||||||| auuucCAGAUGCAUCACCAGUGa 2 18 31 53 [ce6:I:6477318-6477340:-] 0.6333 152 7 -17.67 -0.7091 MIMAT0000768 cel-miR-392 172355 K06A5.8 aguaGUGUGCACUAGCUA-CUAu |||| ||| |||| ||| ucucCACAAGUG-CCGAUCGAUc 2 19 354 375 [ce6:I:6476824-6476845:-] 0.6962 124 0 -14.65 -0.2856 MIMAT0000768 cel-miR-392 172355 K06A5.8 aguaGUGUGCACUAGCUA-CUAu |||| ||| |||| ||| ucucCACAAGUG-CCGAUCGAUc 2 19 180 201 [ce6:I:6476824-6476845:-] 0.6962 124 0 -14.65 -0.4077

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score nmtn-1 RAID00338791 cel-miR-359 miRNA MIMAT0000701 nmtn-1 mRNA 172355 Prediction 0.1828 nmtn-1 RAID00375705 cel-miR-58a-3p miRNA MIMAT0000030 nmtn-1 mRNA 172355 Prediction 0.1828 nmtn-1 RAID00448818 cel-miR-80-3p miRNA MIMAT0000053 nmtn-1 mRNA 172355 Prediction 0.2202 nmtn-1 RAID00861516 cel-miR-82-3p miRNA MIMAT0000055 nmtn-1 mRNA 172355 Prediction 0.2202 nmtn-1 RAID01350339 cel-miR-47-3p miRNA MIMAT0000018 nmtn-1 mRNA 172355 Prediction 0.1828 nmtn-1 RAID01392210 cel-miR-392-3p miRNA MIMAT0000768 nmtn-1 mRNA 172355 Prediction 0.1828 nmtn-1 RAID02719950 cel-miR-81-3p miRNA MIMAT0000054 nmtn-1 mRNA 172355 Prediction 0.2202