DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015107 cel-miR-71* 175742 Y32H12A.8 cgcuuuUUGUCUUAUCACUAu ||: | ||||||| ucuuucAAUCG-CUAGUGAUu 2 16 148 167 [ce6:III:5385629-5385648:-] 0.4808 141 7 -7.42 -0.7201 MIMAT0015112 cel-miR-229* 175742 Y32H12A.8 gauacuGUGGGCU-AUGGAAAGa ||:| | |:|||||| ugcgccCAUCAAAUUGCCUUUCu 2 17 222 244 [ce6:III:5385552-5385574:-] 0.4808 135 6 -19.29 -0.2073 MIMAT0000313 cel-miR-258 175742 Y32H12A.8 uuuuccUAAGGAGAGUUUUGg |||::|:||||||: cccauuAUUUUUUUCAAAAUu 2 16 120 140 [ce6:III:5385656-5385676:-] 0.4808 147 0 -12.16 -0.1151 MIMAT0000324 cel-miR-268 175742 Y32H12A.8 ugGUUUGACGAAGAUUAAGAACGg :| || |:||: ||||||: gaUAUACAGUUUU--CUUCUUGUu 2 23 5 26 [ce6:III:5385770-5385791:-] 0.4808 135 0 -10.87 -0.1418 MIMAT0004229 cel-miR-794 175742 Y32H12A.8 ucacuguugcUACUAAUGGAGu || |||:||| auuuuuuguuAUCUUUAUCUCa 2 13 49 70 [ce6:III:5385726-5385747:-] 0.4808 128 0 -8.28 -0.1172 MIMAT0015267 cel-miR-1829a* 175742 Y32H12A.8 auGUU-UGUUAAUCUUCAGGGGAa ||| ::| || | | |||||| ucCAAUGUAUUUCGUAUUCCCCUc 2 22 87 110 [ce6:III:5385686-5385709:-] 0.4808 132 6 -11.15 -0.1559 MIMAT0006770 cel-miR-1829b 175742 Y32H12A.8 auguugguagaucuucUAGCGAa |||||| uuuugaaauucuuucaAUCGCUa 2 8 139 161 [ce6:III:5385635-5385657:-] 0.4808 120 6 -8.22 -0.1057 MIMAT0014447 cel-miR-2953-3p 175742 Y32H12A.8 cgaugucUUCUCGAUCACUAGu || |||||||||: uucuuucAAUCGCUAGUGAUUa 2 16 147 168 [ce6:III:5385628-5385649:-] 0.4808 143 0 -16.08 -0.1273 MIMAT0000004 cel-miR-2 175742 Y32H12A.8 cguguaguuucgaccgACACUAu |||||| agguauauuuucaauaUGUGAUa 2 8 171 193 [ce6:III:5385603-5385625:-] 0.4808 120 6 -13.20 -0.3779 MIMAT0000004 cel-miR-2 175742 Y32H12A.8 cguguaguuucgaccgACACUAu |||||| uucugauuggauuuuaUGUGAUa 2 8 285 307 [ce6:III:5385489-5385511:-] 0.4078 120 6 -12.58 -0.1730 MIMAT0000014 cel-miR-43 175742 Y32H12A.8 cgcugucguucauuugACACUAu |||||| agguauauuuucaauaUGUGAUa 2 8 171 193 [ce6:III:5385603-5385625:-] 0.4808 120 6 -8.66 -0.3749 MIMAT0000014 cel-miR-43 175742 Y32H12A.8 cgcugucguucauuugACACUAu |||||| uucugauuggauuuuaUGUGAUa 2 8 285 307 [ce6:III:5385489-5385511:-] 0.4078 120 6 -10.15 -0.1730 MIMAT0000043 cel-miR-71 175742 Y32H12A.8 agugauggguacAGAAAGu |||||| aaauuuugaaauUCUUUCa 2 8 136 154 [ce6:III:5385642-5385660:-] 0.4808 120 6 -7.27 -0.2055 MIMAT0000306 cel-miR-250 175742 Y32H12A.8 acgguugucaacugACACUAa |||||| guauauuuucaauaUGUGAUa 2 8 173 193 [ce6:III:5385603-5385623:-] 0.4808 120 6 -8.02 -0.3749 MIMAT0000306 cel-miR-250 175742 Y32H12A.8 acgguugucaacugACACUAa |||||| cugauuggauuuuaUGUGAUa 2 8 287 307 [ce6:III:5385489-5385509:-] 0.4078 120 6 -7.81 -0.1730 MIMAT0000310 cel-miR-254 175742 Y32H12A.8 ggAUGUCAGCGCUU-UCUAAACGu ||:| : :||| ||||||| uaUAUAUAUUUGAAUCGAUUUGCg 2 22 202 225 [ce6:III:5385571-5385594:-] 0.4808 152 7 -13.51 -0.5213 MIMAT0004232 cel-miR-797 175742 Y32H12A.8 agAAGAGUAACACU-AACGACACUAu |||| |||| || || |||||| ugUUCUGAUUG-GAUUUUAUGUGAUa 2 24 283 307 [ce6:III:5385489-5385513:-] 0.4078 144 6 -21.36 -0.1714 MIMAT0004232 cel-miR-797 175742 Y32H12A.8 agaagaGUAACACUAACGACACUAu :||| | | | |||||| aagguaUAUUUUCAAU-AUGUGAUa 2 20 170 193 [ce6:III:5385603-5385626:-] 0.4808 121 6 -10.81 -0.3439 MIMAT0004232 cel-miR-797 175742 Y32H12A.8 agaagAGUAACACUAACGA-CACUAu |: || || ||| ||||| ugaaaUUCUUUCAAUCGCUAGUGAUu 2 21 142 167 [ce6:III:5385629-5385654:-] 0.4808 120 0 -10.56 -0.8876

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Y32H12A.8 RAID00346409 cel-miR-2-3p miRNA MIMAT0000004 Y32H12A.8 mRNA 175742 Prediction 0.2202 Y32H12A.8 RAID00536761 cel-miR-250-3p miRNA MIMAT0000306 Y32H12A.8 mRNA 175742 Prediction 0.1828 Y32H12A.8 RAID00634601 cel-miR-43-3p miRNA MIMAT0000014 Y32H12A.8 mRNA 175742 Prediction 0.2202 Y32H12A.8 RAID01910341 cel-miR-254-3p miRNA MIMAT0000310 Y32H12A.8 mRNA 175742 Prediction 0.1828 Y32H12A.8 RAID01968377 cel-miR-71-5p miRNA MIMAT0000043 Y32H12A.8 mRNA 175742 Prediction 0.1828 Y32H12A.8 RAID02562900 cel-miR-797-5p miRNA MIMAT0004232 Y32H12A.8 mRNA 175742 Prediction 0.2381