DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015105 cel-miR-64* 176095 ZK652.6 cguacGGUGACUAGCAACGUg :|| | :|||||| uuuccUCAAUACAUGUUGCAc 2 17 77 97 [ce6:III:7832324-7832344:+] 0.4845 128 6 -13.77 -0.1026 MIMAT0015119 cel-miR-247* 176095 ZK652.6 ccAUUAAUCUUUGAAAAGAGAu ||:| | : |:|||||||| ucUAGUCACGUAUUUUUCUCUu 2 21 57 78 [ce6:III:7832304-7832325:+] 0.4752 164 7 -11.36 -1.0718 MIMAT0000324 cel-miR-268 176095 ZK652.6 ugGUU-UGACGA--AGAUUAAGAACGg ||| |: |:| | || ||:|||| uuCAACAUCGUUCGUGUAUUUUUUGCa 2 23 140 166 [ce6:III:7832387-7832413:+] 0.4845 140 0 -10.23 -0.1357 MIMAT0011463 cel-miR-2221 176095 ZK652.6 ugaucgccagaccAUAGUGAAc |:|||||| caauucauagccaUGUCACUUu 2 10 4 25 [ce6:III:7832251-7832272:+] 0.4659 129 6 -9.23 -0.1522 MIMAT0000015 cel-miR-44 176095 ZK652.6 ucgacUUACACAGAGAUCAGu ||| :||||||| uaaaaAAUCGAAUUCUAGUCa 2 17 44 64 [ce6:III:7832291-7832311:+] 0.4659 144 7 -13.03 -1.2440 MIMAT0000016 cel-miR-45 176095 ZK652.6 ucgacUUACACAGAGAUCAGu ||| :||||||| uaaaaAAUCGAAUUCUAGUCa 2 17 44 64 [ce6:III:7832291-7832311:+] 0.4659 144 7 -13.03 -1.2440 MIMAT0000033 cel-miR-61 176095 ZK652.6 cuACUCAUUGCC--AAGAUCAGu | | ||: | |||||||| uuUAAAAAAUCGAAUUCUAGUCa 2 20 42 64 [ce6:III:7832289-7832311:+] 0.4659 146 7 -14.13 -1.2452 MIMAT0000042 cel-miR-70 176095 ZK652.6 uaccUUUGUGGUUGCUGCAUAAu :||: |:|:: ||||||| aaucGAAUUCUAGUCACGUAUUu 2 20 49 71 [ce6:III:7832296-7832318:+] 0.4659 159 7 -12.73 -0.8548 MIMAT0000059 cel-miR-86 176095 ZK652.6 cugacaccGUUUC-GUA-AGUGAAu || || ||| |||||| uaucaauuCAUAGCCAUGUCACUUu 2 16 1 25 [ce6:III:7832248-7832272:+] 0.4659 122 6 -10.92 -1.1474 MIMAT0000298 cel-miR-242 176095 ZK652.6 agcuuCGU-UUCCGGAUGCGuu ||| || :|||||| auguuGCACAAUUUCUACGCcc 3 17 89 110 [ce6:III:7832336-7832357:+] 0.4845 131 0 -13.46 -0.1644 MIMAT0000303 cel-miR-247 176095 ZK652.6 ucuUCUCUUAUC-CGAGAUCAGu | | ||| | :||||||| uuuAAAAAAUCGAAUUCUAGUCa 2 20 42 64 [ce6:III:7832289-7832311:+] 0.4659 150 7 -13.02 -1.2428 MIMAT0000304 cel-miR-248 176095 ZK652.6 acucgcaauaggcacguGCACAUa |||||| uucuuuucaacaucguuCGUGUAu 2 8 135 158 [ce6:III:7832382-7832405:+] 0.4845 120 6 -14.39 -0.1507 MIMAT0004220 cel-miR-785 176095 ZK652.6 agaUGUGUUUUGUUA-AGUGAAu |: || |:| || |||||| ucaAUUCAUAGCCAUGUCACUUu 2 20 3 25 [ce6:III:7832250-7832272:+] 0.4659 127 6 -10.68 -1.1474

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ZK652.6 RAID00150920 cel-miR-247-3p miRNA MIMAT0000303 ZK652.6 mRNA 176095 Prediction 0.2202 ZK652.6 RAID00418142 cel-miR-61-3p miRNA MIMAT0000033 ZK652.6 mRNA 176095 Prediction 0.2381 ZK652.6 RAID00598701 cel-miR-86-5p miRNA MIMAT0000059 ZK652.6 mRNA 176095 Prediction 0.1828 ZK652.6 RAID00621261 cel-miR-70-3p miRNA MIMAT0000042 ZK652.6 mRNA 176095 Prediction 0.1828 ZK652.6 RAID01753021 cel-miR-785-3p miRNA MIMAT0004220 ZK652.6 mRNA 176095 Prediction 0.1828 ZK652.6 RAID01966819 cel-miR-44-3p miRNA MIMAT0000015 ZK652.6 mRNA 176095 Prediction 0.2202 ZK652.6 RAID02199162 cel-miR-45-3p miRNA MIMAT0000016 ZK652.6 mRNA 176095 Prediction 0.2202 ZK652.6 RAID02683081 cel-miR-248 miRNA MIMAT0000304 ZK652.6 mRNA 176095 Prediction 0.1828 ZK652.6 RAID03260323 cel-miR-242 miRNA MIMAT0000298 ZK652.6 mRNA 176095 Prediction 0.1828