iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	dbPTM	UniProt
PHOSIDA	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
UBD/Alpha-Helix/UIM	UIM	11406394

Classification

Family	E-value	Score	Start	End
UBD/Alpha-Helix/UIM	0.035	12.8	171	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqE 16
           ++de L++A+ +SlqE
   Q: 171  QDDENLRMAILESLQE 186
           69*************9 PP

Organism

Saccharomyces cerevisiae

Protein Sequence
(Fasta)

MAYDEDDGEI NFNELVGNLL SSHNQEGQEE GEVQGGEQEG DDFEKIYPTS ENIEPKHPDD 60
SQHMHNSPDQ NIEIPHFVDE EDELVSVVAN AVQNIDDEQA KPENHLENGS EHVTSDTADD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTATG ATGAAGATGA TGGAGAGATA AATTTTAATG AACTTGTGGG GAACTTACTA 60
AGCTCACATA ACCAAGAGGG ACAAGAGGAA GGAGAAGTGC AAGGAGGAGA ACAGGAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1017--Isopeptide bond
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0832--Ubl conjugation

Interpro

IPR021386--DUF3020
IPR009071--HMG_box_dom
IPR003903--UIM_dom

PROSITE

PS50118--HMG_BOX_2
PS50330--UIM

Pfam

PF11223--DUF3020

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

KEGG

sce:YDR464W

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006051	Arabidopsis lyrata	30.10	1.00e-03	35.00
IUUC-Ago-007994	Ashbya gossypii	34.63	5.00e-67	248.00
IUUC-Acl-008097	Aspergillus clavatus	37.74	2.60e-02	32.30
IUUC-Afl-008746	Aspergillus flavus	30.17	5.00e-03	33.90
IUUC-Aor-010224	Aspergillus oryzae	30.17	5.00e-03	33.90
IUUC-Ate-010429	Aspergillus terreus	28.33	9.00e-03	32.30
IUUC-Ame-011298	Astyanax mexicanus	29.09	2.20e-02	30.80
IUUC-Bta-013506	Bos taurus	32.79	1.10e-01	31.20
IUUC-Bci-013617	Botrytis cinerea	30.43	9.40e-02	30.80
IUUC-Cja-019870	Callithrix jacchus	30.56	4.00e-03	35.00
IUUC-Cpo-021849	Cavia porcellus	38.71	1.00e-02	31.60
IUUC-Cin-025603	Ciona intestinalis	40.48	1.50e-01	29.60
IUUC-Dse-031313	Dothistroma septosporum	36.36	1.80e-02	32.30
IUUC-Dme-031801	Drosophila melanogaster	27.71	4.10e-01	29.30
IUUC-Gmo-038899	Gadus morhua	33.33	8.10e-02	31.20
IUUC-Gac-041783	Gasterosteus aculeatus	28.57	3.90e-02	32.00
IUUC-Gma-042889	Glycine max	23.40	2.00e-03	34.70
IUUC-Kpa-049086	Komagataella pastoris	43.10	3.00e-06	45.80
IUUC-Mor-057140	Magnaporthe oryzae	41.46	1.20e-02	32.30
IUUC-Mtr-057882	Medicago truncatula	37.66	3.00e-03	33.10
IUUC-Mmu-064253	Mus musculus	31.48	2.00e-03	36.20
IUUC-Nfi-068445	Neosartorya fischeri	31.51	3.50e-02	29.60
IUUC-Ont-072267	Oreochromis niloticus	29.58	1.00e-02	33.10
IUUC-Ola-086787	Oryzias latipes	28.26	1.90e-02	32.00
IUUC-Oar-090385	Ovis aries	25.35	2.50e-02	31.20
IUUC-Pno-095029	Phaeosphaeria nodorum	38.78	6.70e-02	28.90
IUUC-Ppa-095239	Physcomitrella patens	33.33	7.00e-03	33.10
IUUC-Ptt-103796	Puccinia triticina	34.04	6.00e-04	33.90
IUUC-Sja-107872	Schizosaccharomyces japonicus	46.67	2.00e-03	35.00
IUUC-Spo-108191	Schizosaccharomyces pombe	42.86	3.00e-07	48.10
IUUC-Smo-109291	Selaginella moellendorffii	26.53	4.00e-03	34.30
IUUC-Sar-113325	Sorex araneus	42.11	4.80e-02	32.70
IUUC-Tru-117896	Takifugu rubripes	27.54	2.90e-01	27.70
IUUC-Tbe-127626	Tupaia belangeri	30.59	1.70e-02	30.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence