iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015153

Ensembl Protein ID

Bo4g158580.1

UniProt Accession

A0A0D3C223; A0A0D3C223_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g158580	Bo4g158580.1	Bo4g158580.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	84.60	0.00e+00	1043.00	IUUC-Ath-006790

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSQIYSFAGE SEFYRRGSNP KEANIFLSLG SLVDCYYPPC KRSRVVAAPS LFSAFEEEKP 60
VSIDVLPDEC LFEIFRRLPG PQERTACAFV SKHWLTLVTS IRQSELDVVD HKTEDDSEGC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA TCTATAGCTT TGCTGGTGAG TCTCTCCTTA TTTTCACTCG ATCTCATCTT 60
TTAGAGCTCG ATTTCTTAGA TCTAAGTGCT TCGATTAGAT TTTAGGCGTT TCAATGTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF00646--F-box
PF13516--LRR_6

SMART

SM00256--FBOX
SM00367--LRR_CC

Gene Ontology

GO:0005634--C:nucleus
GO:0009723--P:response to ethylene

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002552	Amborella trichopoda	48.62	1.00e-159	556.00
IUUC-Aly-006311	Arabidopsis lyrata	84.63	0.00e+00	1025.00
IUUC-Ath-006790	Arabidopsis thaliana	84.60	0.00e+00	1020.00
IUUC-Bdi-014596	Brachypodium distachyon	47.78	2.00e-145	508.00
IUUC-Bra-017379	Brassica rapa	96.01	0.00e+00	1117.00
IUUC-Gma-042946	Glycine max	59.38	0.00e+00	731.00
IUUC-Lpe-051075	Leersia perrieri	47.30	1.00e-142	499.00
IUUC-Mtr-057658	Medicago truncatula	59.22	0.00e+00	706.00
IUUC-Mac-065656	Musa acuminata	49.53	1.00e-163	569.00
IUUC-Oba-075482	Oryza barthii	45.90	2.00e-144	506.00
IUUC-Obr-076655	Oryza brachyantha	48.31	5.00e-120	424.00
IUUC-Ogl-077627	Oryza glaberrima	46.06	2.00e-145	509.00
IUUC-Ogu-078848	Oryza glumaepatula	45.90	8.00e-145	507.00
IUUC-Oin-079776	Oryza indica	45.90	2.00e-144	506.00
IUUC-Ome-081750	Oryza meridionalis	46.86	6.00e-147	514.00
IUUC-Oni-082957	Oryza nivara	46.06	4.00e-145	508.00
IUUC-Pma-094494	Petromyzon marinus	31.41	3.00e-34	139.00
IUUC-Ppa-095810	Physcomitrella patens	36.65	3.00e-72	266.00
IUUC-Pop-099453	Populus trichocarpa	62.40	0.00e+00	759.00
IUUC-Ppe-101207	Prunus persica	59.88	0.00e+00	746.00
IUUC-Smo-109612	Selaginella moellendorffii	36.34	3.00e-99	355.00
IUUC-Sit-110627	Setaria italica	47.32	2.00e-151	528.00
IUUC-Sly-111002	Solanum lycopersicum	53.89	0.00e+00	672.00
IUUC-Stu-112036	Solanum tuberosum	54.69	0.00e+00	690.00
IUUC-Sbi-114535	Sorghum bicolor	48.45	2.00e-148	519.00
IUUC-Tca-121078	Theobroma cacao	63.61	0.00e+00	713.00
IUUC-Tae-125289	Triticum aestivum	46.89	3.00e-139	488.00
IUUC-Vvi-131401	Vitis vinifera	55.62	0.00e+00	633.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence